Oncorhynchus mykiss (rainbow trout): 110507608
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Entry
110507608 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110507608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110507608
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110507608
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
HECT type E3
110507608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
110507608
NCBI-ProteinID:
XP_021443379
Ensembl:
ENSOMYG00000041992
LinkDB
All DBs
Position
27:13941188..13985609
Genome browser
AA seq
2058 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDHTVAGRLQSEQVKHKANSPPESRRSKSKASKTA
PSSASGQSRGHSSRSSLSLSVASFVLQGNPEAAGTSEREPTGHQPKTEGTTRGLKRNSAP
DLNTYTPTPAKKSKSNPPPRDHTTEAKKGTAKSSKKRPLAPELPTGRGQSKKSGASGASP
NLKRKKADSLPCLSSTAGSLPNRTDGRFAKPTKLASKSAASAKAGCSTVTDSSSSASTSS
SSSTGTNSATATQGARLKQGKDQNKARRSRSASSPSPRRSTRDKEQAKAAVSSKFEWAAR
FSPKVNLPKPKLSLPSSSKTETASKPGPSGLQAKLASLRKSTKKRSESPPAELPSFRRST
RQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADSDNNQDGANSSAARTDEAPQGASGTA
SSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGAS
SKAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALMTLLQMEHNF
DIMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSK
AILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVSDSLPLLTQRLTHQD
KKSVESTCLCFARLVDNFQHEENLLQQVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRMF
SLMCSNCPCLAVQLMKQNIAETLRFLLCGAANGSCQEQIDLVPRSPQELYELTSLICELM
PCLPREGIFAVDLMLKKGSAQATEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEIS
LSTLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPTTGGHQEVRREDARAQLMKEDP
ELAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIFFADAELLKDVLRNHAVSSHIA
SMLSSQDLKIVVGSLQMAEILMQKLPDVFSVFFRREGVMHQVKNLAESEAFLTSPPKACT
SGTASLCTTTISTANTTAATTATPDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRG
PRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGKLGAQTNSTNSEPSRTAS
VSGLARALPKDSVSNNRDKIKAWIKEQACKFVARYFNNENVDGSNPALNVLQRLCTATQQ
LSLQMDGGVECLVEICSIVSDSDVSSFEIQHSGLVKQLLLYLTSSSDRDLVSRDVRLKRF
LHVFYGCPTPGMEPAGRLEPSENGPLLSLVRKMNNCLSQMEQFPVKVHDFPSGNGNGSRG
SQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREED
EDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQFSLQAEEER
ESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGTKDVVGGKRGRAQTAPTKTSPRNAKKQ
DELWHDGVCPSVASPLEMYLMSEPPESITFDDPSLDVNLLLRVLHSISSYWFYLYDNAVS
KEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVT
AFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINREELLKQAESVMQDLGSSRA
MLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVALSNPKGSQEGTKYMFSSR
GLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHETSIS
SHDLINIDPGVAKSIQHLEDIIRQKRRLEQDRSQTRETLQQALESLNMNGCSVEDLGLDF
TLPGFPNIELKKGGKDIPVTIYNLEEYLRLVVYWTMNEGVSRQFESFREGFESVFPLHHL
QYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAVRFLFDVLSSFDAEQQRLF
LQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIM
RKKLLIAAREGQQSFHLS
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccatacagtcgcaggaaggttgcagtcagagcaggtaaaa
cataaagcaaattcccctcctgaaagtagaagatctaaatctaaggcttccaaaactgca
cccagctcagcctctggccagtccagagggcacagctcaagaagcagtctgtcactgtct
gtggcttcatttgtgctgcaaggcaacccagaggccgcaggtacatcagagcgagagcca
acaggacaccaacccaagactgaaggcaccacccgagggttgaagagaaattctgcacct
gaccttaacacctacacccccaccccagccaagaagtccaaatccaaccccccacccaga
gaccataccactgaggccaagaaaggcacagccaaatcctccaagaagagacccttggct
ccagagctgcctacaggccgtggccagagcaagaagagcggggcctctggggcttcaccg
aatcttaaacggaagaaggctgactccctcccctgtctgagcagcactgctgggtcgctc
cccaaccgtaccgacggcagatttgcaaaacccaccaagctggcgtcgaagtcggccgcc
tcagccaaagctgggtgtagcacggtgactgactcctcctcttctgcctccacctcttcc
tcctcctccacaggcaccaacagtgccaccgccacacagggtgccaggctcaagcagggc
aaagaccagaacaaggcacgtcgttcccgctccgcctccagcccctctccacgccgaagc
acccgtgacaaggagcaggccaaagccgccgtctcgtccaagtttgagtgggcggcccgc
ttcagtcccaaggtcaacctgccaaagcccaaactgtccctacccagctcctccaagaca
gagaccgcctccaaacctggaccctcaggactacaagccaaactagcaagtttgaggaag
tccactaagaagcgcagcgagtctcctccagcagagctccccagctttcggcggagcaca
cgccagaagaccacgggctcctgcgccagcaccagtcggcgaggctcaggcctgggcaag
cgcggggcagccgaagctcgccgacaagagaagatggctgactcggacaacaaccaggat
ggggccaactcctcggctgcccgcactgatgaggccccgcagggggcttcgggtacagct
tctagctcagtggccggagctgtagggatgaccacatccggtgagagtgagtccgatgac
tctgaaatgggcagactccaagccctgctggaggccaggggtctacccccacacctcttt
gggcccctgggaccccgcatgtcccagctgtttcacagaactataggcagtggagccagc
tccaaggctcagcagctgctgcagggcctgcaggccaccggcgacgagtcccagcagctc
caggccgctatcgagatgtgccagctgctagtgatgggcaacgaggagacactaggaggc
ttccccgtgaagagtgtggtgcctgctctgatgacattgttacagatggagcataacttt
gacattatgaaccacgcctcccgtgctctcacttacatgatggaggcgctgcctcggtcc
tctgctgtggtcgtggatgccatccccgtcttcctggagaagcttcaggtgattcagttc
attgacgtggcggagcaggccctgactgccttggagatgttgtcaaggcgacacagcaaa
gccatcctgcaggctggtggtctagccgactgtctgctgtacctggagttcttcagcatc
aacgcccagaggaatgccctggccattgcagccaactgctgccagagcatcacccctgat
gagttccactttgtctctgactctctgccactgctaacccagagactcacacaccaggat
aagaaatccgttgaaagcacttgtctctgttttgccaggctggtggacaactttcaacac
gaggagaacctgctacagcaggtggcctcgcgggacctgctgaccaacatccagcagctg
ctggtggtcaccccgcccgtgctcagctcgggcatgttcatcatggtggtgcgtatgttc
tccctcatgtgctccaactgcccctgtctggccgtgcagctcatgaagcagaatattgca
gagactctgcgcttccttctgtgcggagcggccaacggtagctgccaggagcagattgac
ctggtgccccggagcccccaggagctctatgaactcacctcactcatctgcgagctgatg
ccctgcctgcccagagagggcatctttgctgtggatctcatgctgaagaagggcagtgcc
caggccacagagggggccatttggcagtggagggacgaccggggcctgtggcacccctac
aaccgcatcgacagccgcatcattgagacggcccaccagaacggagaggacgagatcagc
ctgtccaccctgggccgcgtctacactatcgacttcaactctatgcagcagatcaacgag
gacactggcacagcacggggtatccagaggaaacccaaccccttagccaaccctactact
gggggtcaccaggaggtgaggagggaggatgcacgggcccagctgatgaaggaagaccct
gagctggccaagtgcttcatcaagaccctttttggggtgctgtacgaggtgtacagctcg
tcggcaggcccagccgtcagacataagtgcctccgagccatcctcaggatcatcttcttc
gccgatgccgagctcctcaaggacgtgctgagaaaccacgcggtgtccagtcacattgcc
tccatgctgtccagccaggacctgaaaattgtagtgggctctctgcagatggctgagatc
ctcatgcagaagctgcccgacgtattcagtgtcttcttcagaagagaaggtgtgatgcac
caggtgaagaacctggctgagtcggaggccttcctcactagtcccccgaaggcgtgcacc
agcggcacggctagcctgtgtaccaccaccatcagcactgcaaacactacggcggccacc
accgccaccccagacctgggctcacctagcttccagcacagcatggacgactcactggac
ctcagcccacaggggcggttaagtgatgtgctgaagagaaaacgtctgcctaagagaggg
cccagaaggcccaagtactctcctcccagggacgacgacaaagtagacaatcaggccaag
agtcctaccactactcagtcccccaaatcctccttcttggccagtctgaaccccaagacc
tggggcaagctgggcgcccagaccaacagcacaaactctgagccctctcgcacggccagt
gtgagtggcctggcacgcgcccttcccaaggactcggtctccaacaacagggacaagatc
aaggcttggatcaaggagcaggcctgtaagtttgtggcacgctacttcaacaatgaaaac
gttgatggcagcaaccccgcactaaatgtactccagagactctgcaccgccacgcaacag
ctcagcctacagatggacggtggcgtggagtgcctcgtggagatctgcagcatcgtgtcg
gactcggacgtgtcgtcgttcgagatccagcacagcggcctggtcaagcagctgctgctc
tacctgacctccagcagtgaccgtgacctggtcagccgtgacgtccgcctcaagaggttc
ctgcatgtcttctacggctgcccgaccccggggatggagccggcaggccgcctggagccg
tctgagaacgggcccctgctgtcactggtgcgcaagatgaacaactgcctaagccagatg
gagcagttccctgtcaaggtgcacgacttccccagtggcaacggcaacgggagcagaggt
tctcaggctctgaagttctttaacacacaccaactcaagtgtcagctgcagaggcacccg
gactgcaccaatgtgaagcagtggaaggggggcccggtgaaaattgaccccctggctttg
gtacaggccattgaacgctacctggtggtccgaggttacggacgaataagagaggaggat
gaggacagtgacgatgatggttcagacgatgaaattgatgaatctctggcggcccagttc
ctgaactcaggcagcgtgcgccaccggctgcagttctacatcggcgaccacctgctgccc
tacaacatgacggtttaccaggcggtgcggcagttcagcctgcaggcagaagaggagagg
gagtcaacagatgacgaggccaacccgctcggacgggccggcatctggaccaaaacccac
accatatggtataagccagtgagggaggatgaggatggcactaaggatgtggtgggaggg
aagaggggccgggcacagactgcccccaccaagacctcgccccgcaatgccaagaaacag
gacgagctgtggcacgacggcgtgtgtcccagcgtggccagcccgttggagatgtacctc
atgtcagaacccccagagagcatcaccttcgacgacccgtctctggatgtcaacctgttg
ctgagggtgctgcactccattagtagttactggttctacctgtacgacaatgctgtttct
aaggagatcatccccaccagtgagttcatcaacagtaagctgacagccaaggccaaccga
cagctgcaggaccctctggtcatcatgaccggcaacatccccacctggctcacagagctc
ggcaagacctgtcccttcttcttcccattcgacacacggcagatgctcttctatgtgact
gcttttgaccgcgaccgggccatgcagcgcctccttgacaccaatcctgagatcaaccag
tcagattcccaggacagccgtgtggcgccccgcctcgacagaaaaaagcgaacgataaac
cgtgaggagctgctgaagcaggcggagtcagtgatgcaggaccttggcagctccagagcc
atgctggagatccagtatgagaacgaggtgggcacagggctgggtcccaccctggagttc
tacgccctggtctcccaggagctgcagagggccgacctcgggctgtggaggggtgaggag
gtcgccctgtccaacccaaaaggaagccaagaagggaccaagtacatgttcagctccaga
gggctgtttgccgttccctttggcaggacaaccaaaccggcacacatcgccaaaatcaag
atgaagttccgcttcctgggcaagctgatggccaaggctataatggacttcagactgctg
gacctgcccctggggctgcccttctacaagtggatgctgcggcacgagacgtccatcagc
tcccacgacctgatcaacatcgacccgggcgtggccaagtccatccagcacctggaggac
atcatccgccagaagagaaggctggagcaggaccgctcccaaacgagggagaccctgcag
caggcgctggagagtctcaacatgaacggctgctctgtggaggatctgggcctggacttt
accctccccggtttccccaacattgagctgaagaagggaggcaaggacatccctgtcacc
atctacaatctggaggagtacctcaggctggtggtctactggacgatgaatgaaggtgtg
tcccggcagtttgaatctttcagggaagggtttgagtcagtcttccccctgcatcacttg
cagtatttctaccctgaagagttggatcagctgctttgtggcagcaagtccgagacctgg
gacgtcaagaccctgatggagtgctgtcgtcccgaccacggctacacgcatgacagtcgt
gctgtgaggttcctgtttgacgtgctcagcagtttcgatgcagagcagcagagacttttc
ctgcaatttgtaacaggaagcccaaggctgcctgttggaggtttccgtagtctgaacccg
ccgctgacaatcgtgcggaagacatttgagtcgacggagaacccggacgacttcctgccg
tcggttatgacctgtgtcaactacctgaagctgcctgactactccagcatcgagataatg
cgcaagaaactgttgattgcggcccgtgagggccagcagtccttccacctgtcctga
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integrated database retrieval system
