Oncorhynchus mykiss (rainbow trout): 110507661
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Entry
110507661 CDS
T07259
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110507661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110507661
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
110507661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
110507661
NCBI-ProteinID:
XP_021443464
Ensembl:
ENSOMYG00000042705
LinkDB
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Position
27:complement(17464437..17481646)
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AA seq
1342 aa
AA seq
DB search
MAASAAAQGSNPGLCPSFAVVCSFLERYGQALDLPELTFPQMERYLRDTSTVPKPLVELH
VKLLRKLGKSVSADKWERYLAKVCQDINSSWAWELEHKGYQDMSMECKTSILKYLCEIQF
DDNLKFKTLVNEEEAEAMRLQPLGRDRQGLMYWLQTDAQHNIRLYTEEQDDWDGSTWSCI
VRTRNDLADALDLLKTQLDPEHKEKEEGETEKEMDREKGGSNCATPVERGIRGQEEGEAG
GEVKVEEEEAARQMWKAEEDKKKSKERGKNEEDEEKREKSRSSSYPESTNTDVNMASLAE
KETPTKLAPVVSVKEENIAVEMKEEREKEKPGEKEEGEKQSGRKEERSEVIDNRVSTITA
LVKEEPQTLSNSPSNAVSVVMVPISATMKQEVPPVKEEAERALRTDQQAKIPLKKRELFG
ANRHHSNTHHNNNNNDMHSNHHNNNSHSSSTSSSIIVRNPSVTHTKEEQLGRQSTPDGGL
AVPMPEELTNGGAPLNGLGGLIRGICHVGVICRPASQQQDSGSVCTERTRLGSEEGKERA
RAPDKERSRQSVLVRKSPGWGETGAPSPLEPRGQERQAGGEEREGERARNEQGERSRERL
GEDGREKARENLHGDQSGERDDNPKEKKTNLHVEKSEGCHGTEEEEKKKSTSGEKEQESE
RSQTVEGQVDQGEALNTDTPAHAGVKGAGHGATDRPGPLEASSELQKEGIRLKIKIPPNQ
RRENVREQKGEEQGDGRSLRRSARICRPSPNKVERQDTPPGVREEEEEKTAQWQKKRENP
EGQSRTVKSRRRQRGARWSNTRAKRCKPNEGGEEEEEERGGGGSGCDSDDSSQSEETPNE
DPCSHCGLPNHPELILLCDSCDSGYHTACLRPPLMVIPEGEWFCPPCQHKLLCDRLEEQL
QNLDCAMKKRDRAERRRERLVYVGISVENIIPQEGEEEEEKQAKKKDAKNTKNLGRRSTR
TRKCISYRFDDFDDAIDEAIEEDVRDADGGGVGRDKDIATISEEGKEKRGPTTAQAPPTR
SRKRRRLNDLESDSTAAESEEEFQLSASTEEEFVASGDEEAASDVDSFASDPGFVSQSTR
AQRRAPKQRTTRTSAKCKKPPRRRRRGWGEEESEDEEEEIETSDLSDSDEDRKRCGLRRG
RKREVNYRETSESEGSQATTNKDKAKSGRRLSSSNSDESSHSRESEEEEKRGKRWREEVE
ETRTRGKKRGGEKMGRGKRREVLIEQRRKHLAMLKKCRPSTKDNEDDNGESESSSEEDRP
IRKRLNRIDSDEEGKNKEEDEEEKKLRKTLSKDKESNSPNRQQASRGSMKPGAVSAALPR
DRAARAGQNRSNSPPPPDQSDA
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcagcggcagcgcagggctcaaaccccggtctctgccccagtttcgcagtg
gtctgctcgttcctggagcgctacggacaagccctggacctacccgaactcacctttccg
cagatggagaggtatctccgggacacatcgacagttcccaagccactagtggagctgcat
gtcaagctgctgcggaagcttggcaagtctgtgtctgcagacaagtgggagaggtacctg
gctaaggtatgccaggacatcaacagtagctgggcctgggagctggaacacaagggctac
caggacatgagcatggagtgcaaaaccagcatcctcaaatacctgtgtgagatccagttt
gatgacaacctgaagttcaagacgttggtgaacgaggaggaggcggaggcgatgaggctg
cagccgttgggcagagacagacagggcctgatgtactggctgcagactgacgcccaacac
aacatccgactgtacacagaggaacaggacgactgggacggatccacctggagctgtatc
gtcagaacccggaatgacttagccgatgctttggacctcctgaagacccagctggatcca
gaacacaaggagaaagaggaaggagagacggagaaagagatggacagagagaagggagga
tccaactgtgccacacctgtggagagggggataagaggccaggaggagggtgaagctgga
ggagaggtaaaggtggaggaagaggaagcggcaagacagatgtggaaggctgaggaagac
aagaagaagagtaaagagagagggaagaatgaggaagatgaggaaaagcgagaaaagagt
agatcatcttcctacccagagtccactaatacggacgtcaacatggcgtctttagcagag
aaggaaaccccaaccaagcttgcaccggtagtctcagtgaaggaggaaaacattgcagtt
gagatgaaggaagaaagggagaaggaaaaaccaggtgagaaagaagagggagagaaacag
agcgggaggaaggaggagaggtcagaagtgattgacaacagagtgagcaccatcaccgca
ctggtcaaagaggaaccccaaacgcttagcaactccccaagcaatgctgtctctgtcgtc
atggtgcctatctcggcaacgatgaaacaggaagttcctcctgtgaaggaggaagcggag
agggcgctgaggaccgatcagcaggccaagataccactgaagaagagagagctctttggc
gccaaccgtcaccatagcaacacacatcacaacaacaacaacaatgacatgcacagcaac
catcacaacaacaacagccatagcagcagtactagcagtagcatcatcgtccgtaaccct
tcagtaacacataccaaggaggagcagctggggaggcagtcaactcctgatgggggcctg
gcagtcccaatgccagaggagctgaccaatgggggggctcccctaaacgggcttggaggg
ctcataaggggtatatgtcatgtgggggtcatttgcaggccggcgtcgcagcaacaagat
agcggatcggtctgtacggagagaaccagactagggtcagaggaggggaaggagagggcc
agagctccagacaaggagaggagcaggcagtcagtcctggtgaggaagagtcctggctgg
ggagagactggagccccatcacccctggagcctagaggacaggagagacaggcaggagga
gaggagagggaaggagagagagcgaggaacgagcaaggagagagatcgagggagaggtta
ggagaggatggaagagagaaagcgagggagaatttacatggagaccagtctggagagagg
gatgacaacccaaaagagaaaaagactaacctccatgtggagaaaagcgagggatgccat
ggaacagaggaagaggagaagaagaagagtacctcaggagagaaggagcaggagtcagag
agaagccagactgtagaaggacaggtggaccagggagaggccctcaacacagacacacca
gcccatgctggggtgaaaggtgctgggcatggagcaacagaccggccgggtcccctggaa
gcctcctctgagctgcagaaagaagggatcaggctgaagataaagatccctcccaaccag
aggagagagaacgtgcgagagcagaagggggaggagcagggagatgggaggtctctgcgg
agatcggctcggatatgcagacccagcccaaacaaggtggagaggcaagacacaccccca
ggggtgagggaggaagaagaagagaagactgctcaatggcaaaagaagagagaaaaccct
gagggacaaagcaggactgtaaagagcagacgacgacaacgaggcgcccgctggtcaaat
actcgagcgaagcgatgcaaaccgaatgagggaggggaggaggaggaggaggagagaggg
ggtgggggaagtggttgtgactcagatgactctagccaatcagaggagacgcctaatgaa
gatccctgcagccactgtggactcccaaaccaccccgaactgatcctgctgtgtgattca
tgtgatagtggttaccacaccgcctgtctcagaccccctctcatggtcatacctgaggga
gaatggttctgcccgccctgccaacacaagctgctgtgtgacagactagaggagcagctg
cagaatttggattgcgctatgaagaaaagagaccgagctgagaggaggagggagcgtctg
gtgtatgtgggaatcagtgtggagaacatcattcctcaggaaggggaggaagaagaggag
aaacaggcaaaaaagaaagatgcaaaaaataccaaaaatctgggaaggaggtctaccaga
accaggaagtgtatcagctacaggtttgatgactttgatgacgccattgatgaagcgata
gaggaagacgtcagagatgctgatggaggaggagtggggcgggataaggacattgccacc
atatcggaggaggggaaggagaaacgaggaccaaccacagctcaggcccctcccaccagg
agcaggaagaggcggagacttaacgacctggagagcgacagcacggctgcagagagtgag
gaggagtttcagctcagcgccagtacggaggaggagtttgtagcgtcaggtgatgaggaa
gcagccagtgatgtggacagctttgccagtgacccgggcttcgtaagccagtctacacgg
gcacagagacgggcacctaaacagagaacaaccaggacctcagcaaagtgcaagaaaccc
ccccgcagacggaggagaggatggggggaggaggagagtgaagatgaggaggaagagata
gagaccagtgatttgagtgacagcgatgaggacaggaagaggtgtggtttaaggcggggc
cggaagcgggaggtgaactaccgcgagacgtcggaatctgagggttcccaggcaaccact
aataaggacaaggccaaatccggccgtcgtctctccagctcaaacagcgatgaatcctcc
cattcgagagagtctgaggaggaagaaaagaggggaaagaggtggagagaagaggtggag
gagactagaacaaggggaaagaagaggggaggagagaagatgggcagagggaagcggaga
gaggtgttgatagaacagcggaggaaacatctagctatgctgaagaaatgcagaccctcc
accaaagataatgaggatgataatggggaatcggagtcgtcatccgaggaagatcgtcct
atccgcaaacgactgaaccgcatcgactctgatgaagagggaaaaaataaggaggaggat
gaagaggagaagaagctgagaaagacgttgtcaaaagacaaggaatcaaacagccctaac
agacagcaggcctctagaggctcaatgaagcctggggctgtgagtgcagccttacccagg
gacagagcagccagagctggacagaacaggtctaacagccccccacctcctgaccagtca
gacgcatga
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