Oncorhynchus mykiss (rainbow trout): 110507696
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Entry
110507696 CDS
T07259
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110507696
Membrane trafficking [BR:
omy04131
]
Protein recycling
Others
EARP complex
110507696
Endosome - Golgi transport
Tethering complex
GARP complex
110507696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
Syndetin_C
GrpE
PsaD
Sec8_N
NBD94
Laminin_II
Motif
Other DBs
NCBI-GeneID:
110507696
NCBI-ProteinID:
XP_021443522
Ensembl:
ENSOMYG00000029985
UniProt:
A0A8C7SGG7
LinkDB
All DBs
Position
27:complement(19296874..19328159)
Genome browser
AA seq
831 aa
AA seq
DB search
MMMEEEELEFAEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLA
NIDDVVNKIRLKIRCLDDNIRTVVRGQTNVGQDGRQALEEAQVAIGQLFGKIKDIKDKAE
KSEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQ
GVVNVLEHFHKYMGIPQIRQLSERVKVAQSELGTQILADFEEAFPAQGSKRAGGPSNVLR
DACLVANVLDPRIKQEIIKKFIRQHLSEYMVLFQENQDVAWLDKIDRRYAWIKRQLVDYE
EKYGRMFPEEWCMTERIAVEFCHITRTELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLLA
KRFSGCTLTDRPGVKKPETPLESTNPFLEDEIGEDGSEMEEDLDRPKKHKAPDNPFHGII
SKCFESHLYVYIESQDKNLGEMIDRFVSDFRAQGPPKAGTEDGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIAFTTIFQKYLREYAWKILSGNLPKTSSNSGGLTIKSLLQEKEGSEA
AKFTVEELCLICSILSTAEYCLATTQQLEEKLKEKVDKNLVERINLTGEMDTFSNVISNS
IQLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSVIMHIKQNVPIIRDNLASTRK
YFTQFCIKFTNSFIPKFINHLFRCKTISMVGAEQLLLDTHSLKTVLLDLPSIGSQVVRKA
PASYTKIVVKGMTRAEMILKVVMAPHEPSVVFVDNYIKLLADGNPETFQKTLDMKGLKRS
EQSSMLELFRQRLPTPPSGTDGGPSLSFSTPTPEQENSRIRKLEKLIKKRL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggaggaggaagaattggaatttgcggaggatttggaggcgattttgcacctt
actcctgaggtgcagttggccatcgagcaggttttccccagtcaagacccattggacaga
gcagattttaatgctgtggaatacatcaatacattgtttcctactgagcagtcactggct
aatatagatgatgtggtcaacaagatccgtctgaagattcggtgtctggatgacaacatc
aggacggtggtgagaggccagaccaatgtgggccaggatggcagacaggcactggaggag
gctcaggtagccatcggccagctctttggcaaaatcaaagacattaaggacaaggctgag
aaatctgagcaaatggtcaaggagataacgcgggacatcaaacagctggaccatgctaag
cgtcacctgaccacctccatcaccaccctcaaccacctgcacatgctggccgggggcgtg
gactctctagaggcaatgacgaggaagaggcagtatggagaggtggctaacctgctacaa
ggtgtagtcaacgtcctggagcacttccacaaatacatgggaatccctcaaatcagacag
ctctcagagagggtaaaagtggcccaaagcgagctggggactcagatcctggcagacttt
gaagaggccttccccgctcaggggtcaaagagagcagggggacccagtaatgttctgagg
gatgcctgtcttgtggccaacgtcttggacccccgcatcaaacaggagatcatcaagaag
ttcatcagacagcacctctctgagtacatggtgctcttccaggagaatcaggatgtagct
tggttggataagattgaccgccgttacgcctggattaagcgtcagctggtggactatgag
gagaagtacggacgcatgttccctgaagagtggtgtatgactgaacgtatcgctgtggag
ttctgccacatcaccaggacagagctggccaaagtgatgcggacgcgggccaaagagatc
gaggtcaagttgcttctgtttgccattcagaggaccaccaacttcgaggggctgctcgcc
aagcgcttctctgggtgcaccctcaccgacaggcccggggtgaagaagccggagacacca
ctggagtccaccaaccctttcctggaggacgagattggagaggatgggtcagagatggag
gaggatctggataggcccaagaagcacaaggctcctgacaaccccttccatggcattatt
tccaagtgcttcgagtctcacctctatgtctacatcgagtctcaggacaagaacctgggg
gagatgattgaccgtttcgtgtcagacttccgggcacagggcccccccaaggcgggcacg
gaggacggtggagcggtgctgcccagctgtgctgacctgttcgtctactataagaagtgc
atggtgcagtgctctcagctcagcacaggggaacctatgatcgccttcaccaccatcttc
cagaagtacctcagagagtatgcctggaagatactgtctggaaacctacccaagactagc
agtaacagtggaggactgaccatcaagagtctactgcaggagaaggagggttcggaggct
gctaagttcactgtagaggagctgtgcctcatctgtagcattctcagtactgcagagtac
tgtctggccacaacacagcagttggaggagaagctgaaggagaaggtggataagaacctg
gtggagagaatcaacctgactggagagatggacaccttcagcaatgtgatctccaacagt
atccagttgcttgttcaggacctggacgctgcctgtgaccctgctctcactgccatgagc
aagatgccatggcagagcgtagagcatgtaggtgaccagagtccctatgtgacgtcagtc
atcatgcacatcaaacagaacgtccccatcatcagagataacctggcctccacacgaaaa
tacttcacccagttctgcatcaagttcaccaactctttcattcctaaattcatcaaccac
ttgttcagatgtaagactatcagcatggtgggggctgaacagctcctcctggacacccac
tccctgaagacagtgttgttggatctgccctctataggctctcaggtggtccgcaaggcc
ccagccagctacaccaagatagtcgtgaaggggatgacccgcgctgagatgatcctcaag
gtggtcatggccccccatgaaccctctgtggtgtttgtggataactacatcaagctcctt
gctgacgggaacccagagaccttccagaaaactctggatatgaaggggttgaagcgcagt
gagcagagcagcatgttggagctcttcagacagaggttacccactccaccctcagggacc
gatggaggcccctctctctccttcagcacccccacccccgagcaggagaactcgcgcata
cgcaaactggagaagctcatcaagaagagactctga
DBGET
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