KEGG   Oncorhynchus mykiss (rainbow trout): 110507723
Entry
110507723         CDS       T07259                                 
Symbol
cldnf
Name
(RefSeq) claudin-like protein ZF-A89
  KO
K06087  claudin
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03272  Virion - Hepatitis viruses
omy04382  Cornified envelope formation
omy04514  Cell adhesion molecules
omy04530  Tight junction
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    110507723 (cldnf)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    110507723 (cldnf)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    110507723 (cldnf)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    110507723 (cldnf)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:omy03037]
    110507723 (cldnf)
   04147 Exosome [BR:omy04147]
    110507723 (cldnf)
   04515 Cell adhesion molecules [BR:omy04515]
    110507723 (cldnf)
Cilium and associated proteins [BR:omy03037]
 Other cilia and associated proteins
  Stereociliary proteins
   110507723 (cldnf)
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   110507723 (cldnf)
  Exosomal proteins of colorectal cancer cells
   110507723 (cldnf)
Cell adhesion molecules [BR:omy04515]
 Immunoglobulin superfamily
  L1 family
   110507723 (cldnf)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 Amastin SUR7 Colicin_V MFS_MOT1 DUF3810 TMEM174 DUF973 DUF3185 Fig1
Other DBs
NCBI-GeneID: 110507723
NCBI-ProteinID: XP_021443598
UniProt: A0A8K9XWW3
LinkDB
Position
27:20063321..20064720
AA seq 255 aa
MGRIGKEVFGQVLSFIGFVGVAVTTGIPMWRVTTYIGANIVTGQIVWDGLWMNCVMQSTG
QMQCKINDSVMRLATDLQAARALVIISIIFIFVGLIVTFIGGQCTSTLKSESSKSKVTIL
GGILLLIGALLVLIPVCWSAAFTISDFNNPLTIETQRREIGASIYIGWGSTALLLIGGII
LCTSCPPQKMYGYPGYPQGAPMYPYPGQPMVQAGPYGRVYTPASRPYSGTGSYAPSKPYA
APIEYAVPGRPGRYL
NT seq 768 nt   +upstreamnt  +downstreamnt
atgggaaggatcggaaaggaggtgtttggccaggtgctcagcttcatcggctttgtgggg
gtggcagtgaccacaggtatccccatgtggagggtaaccacttacatcggtgccaacatc
gtaacaggacagattgtgtgggacggcctgtggatgaactgcgtgatgcagagcacggga
cagatgcagtgcaagataaacgactcagtgatgaggctagcgacagaccttcaggcagcg
agggccctggtcatcatctccatcatcttcatctttgtcggcctgattgtcaccttcatc
gggggccagtgtaccagcaccctgaagtctgaatcctccaagagtaaagtgacgatcctt
ggaggcatcctgctgctcattggtgctcttctggtcctcatccccgtctgctggtcggca
gcgttcaccatctcagactttaataaccctctgaccatcgagacccagaggagggagata
ggagcctccatctacatcggctggggctccacagcgctgctcctcatcggagggatcatc
ctctgcacctcctgcccgccccagaagatgtatgggtacccaggctatcctcaaggagca
cccatgtacccctatccaggccaaccaatggtccaggcagggccctatgggagagtttac
accccagccagcagaccctactcagggacaggttcgtatgcaccaagcaagccatatgca
gcaccaatagaatacgctgtacctggacggcctggacggtatctgtaa

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