Oncorhynchus mykiss (rainbow trout): 110507751
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Entry
110507751 CDS
T07259
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110507751
03036 Chromosome and associated proteins [BR:
omy03036
]
110507751
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
110507751
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
110507751
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
Spt6_S1
S1
S1_RRP5
HHH_3
HHH_9
SH2
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
110507751
NCBI-ProteinID:
XP_021443636
Ensembl:
ENSOMYG00000039596
UniProt:
A0A8C7TX78
LinkDB
All DBs
Position
27:20839696..20870287
Genome browser
AA seq
1738 aa
AA seq
DB search
MDFIEREAEESEEEFVCPEDTEKKALKHAAANDDEEEEEENTEDQDADGNLCGLIDDGVE
EGEGEEEDEEEGNKDKEGDSDSGEEIGHRKRKRSFDDRLDDDDIDLIEENLGVKVKRQKF
RRLRDMSDDEDEEGDEDVREAHEKDMIADEIFMGTGADEGEALDVPLHPGEDEEEDDEES
DIDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGGDFDFAEFDTEAYEDAEEEEE
DADEESWDRPKKQAKKRVGRRSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRSTRV
KPAEDDELEQEAEWIYRNAFSTLTISMQENADYLDRGPTTTFSRKGPSTIQKIKEALNFM
RNQHFEVPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLRRLFQKMQGYQFE
QISADPDKPLADGIRPLDTSDLERLKDVQSSDELGDVYNHFLLYYGRDIPKMQNAARSSK
KKMKKIKVDEDGNEQEVEEEEEEEEEQSKGTDLKLASRRDMYSICQCAGLDGLAKKFGLT
PEQFGENLRDSYQRHETEQFPAEPMELAKDYICSQFSTAEAVLEGTRYMVAMQIAREPLV
RHVLRQTFQERAKINIKPTKKGKKDVDEAHYGYSFKYLKNKPVKELNGDQFLKMFQAEEE
GLLTINICIDLIGVKGYGGDQAYYEEIKQFYYRDEFSHQVQEWNRQRTLAIERSLKQFLY
PQMAKELKNKLIAEAKENIIKACSRKLYNWLKVAPYRPDQQVEEEDEELMSEAHGKGIRV
LGVAFSSSRDTPVFCALVNGDGEVGDFLRLPYFLKRRNAWREDEREKKIHDIETLKKFLN
SKKPHIIAIAGENRDAQMVIEDIKRTASELEQESSFPTIGVELVDNELAMLYMNSKKSEA
DFRDYPPLLRQAVSVARKIQDPLVEYAQVCSSDEDILCLKLHPLQEHVVKEDLLNALYCE
FINRVNEVGVDVNRAMAHPYTQSLVQYVCGLGPRKGSHLLRILKQNNTRLENRTQLVTMC
HMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAE
DANPAGALEEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRSTY
RGPNTEEIFNLLTKETPETFYIGKLITSVVTGIAHRRPQGESYDQAIRNDETGLWQCPFC
QQDNFPELSEVWNHFDSGSCPGQAIGVRCRMDNGVTGFIPTKFLSDKVVKHPEERVKVGM
TVHCRIMKIDIEKLSVDLTCRTSDLSDKNNEWKLPKDTYYDFDTETEDVKQEEEAKKKQQ
RTTYIKRVIAHPSFHNINFKQAEKMMESMDQGDVIIRPSSKGENHLTVTWKVADGIYQHI
DVREEGKENAFSLGHTLWINTEEFEDLDEITARYVQPMAAFARDLLGHKYFQECNGGDRK
KMEEVLVKSKKEKPTFIPYYVSACRELPGKFLLGYQPRGKPRVEFVTVTPEGFRYRGQIF
PTVNGLFRWFKDHFQEPVAGITPSSSSRTRTPASVNATPANINIADLTRAVNALPQNMTS
QMFSAIAAVTGQGQNPNTTPAGWASSQYGYTGGSSGGGGSSSAYHVFATPAQQPIATPLL
TPSYSYTTPTPSQQQTITTPQYPSSTPQSSHGHGHRPSSSTPSSTSSSRHHRTPTPKATS
HTAVDWGKMAEQWLQEKEAERKKTRPRMTPRPSPSPMIESTPMSLAGDATPLLDEMDR
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atggatttcatcgagagggaagcagaggagtctgaggaggaatttgtgtgtccagaggac
acagagaaaaaggcactgaagcatgctgcagcaaatgatgatgaggaggaggaagaggag
aatacagaggatcaagatgcagatggaaacctctgtggtctgattgatgatggtgtggag
gaaggggaaggggaggaagaggatgaggaagaagggaataaagataaagaaggtgatagt
gactctggggaggaaattggacaccgtaagaggaagagaagctttgacgaccgcttggat
gatgatgatattgatctcattgaggagaatttgggagtaaaagtgaaaaggcaaaagttc
cgtcgtttgcgagacatgtcggatgatgaggatgaggagggagatgaagatgtcagggag
gcccatgagaaggacatgatagcggatgagatcttcatggggacgggagcggatgagggt
gaggcattggatgtgcctttgcatcccggggaggatgaggaggaggacgatgaagagtct
gatatcgatgactttattgtggatgatgacggacagcccttgaaaaaacccaagtggagg
aagaagctgccaggatatactgatgcagcccttcaggaggcccaagagatattcggaggg
gactttgactttgccgagtttgacactgaagcctatgaagatgctgaggaggaggaggag
gatgcagatgaagagtcatgggaccggcccaagaagcaggccaagaagagggtgggtcga
cgcagtatctttgagatctatgagcctagcgagctggagagcagtcacatgacggaccag
gacaacgagatccgctccactgacatgccagagaggttccagttacgctccactcgtgtg
aagccagcagaggatgatgagctggaacaggaggctgagtggatctataggaatgccttc
tctactctcaccatctccatgcaggagaacgcagactatttggacagaggtccaaccact
actttcagcagaaaaggccccagcaccatccagaagattaaagaggctttgaatttcatg
agaaaccaacactttgaggttccgtttatagcgttctacaggaaagagtatgtagagcct
gaactcaatatcaatgatctgtggaaggtttggcagtgggatgagaagtggacccagctg
aaaacccgcaaacagaacctaagacgcctgttccagaagatgcagggataccagtttgaa
cagatctcagctgacccagataagccactggctgatggcattcgaccactagacacttca
gatttagagaggttgaaggatgtccagtctagtgatgaactgggcgacgtctacaaccat
ttcctgctgtactatggccgagatattccaaagatgcagaatgcagccaggtccagcaag
aaaaagatgaagaagatcaaagtggatgaagatggtaatgagcaggaagtagaggaggag
gaagaggaagaagaggagcagtcaaaggggacagacctgaagcttgcatctcgcagggat
atgtacagcatctgccagtgtgcaggactggatggcctggccaagaagtttggtctgact
ccagagcagtttggagaaaacctacgtgacagttaccagcgtcacgagacggagcagttt
cctgctgagcccatggagctggctaaggactacatctgcagccagttcagcacagcggag
gcagtactggaggggactcgctacatggtcgccatgcagatcgcccgggagcctctagtc
agacatgtgctccgacagacgttccaggaaagagccaagatcaacatcaaacccaccaag
aagggaaagaaggatgtggatgaggcccattatggttactcctttaagtatctgaaaaac
aagcctgtaaaggagctgaatggagaccagttcctcaagatgttccaggcagaggaagag
ggcctgctcaccataaacatctgtattgacctgattggagtgaaggggtacggaggtgac
caggcgtactatgaagagataaagcagttttactacagagatgagttcagccaccaggtt
caggagtggaacagacagcgcactctggccattgaacgatccctcaaacagttcctttac
ccgcagatggcgaaagagctgaagaacaaacttattgcagaagcaaaggagaacatcatt
aaggcctgcagcaggaagctgtataactggctgaaggtggcgccctatcggcctgaccaa
caagtggaggaggaggatgaggagctcatgtctgaggcccacggcaaaggaatccgcgtg
ctgggagtggccttctcatccagcagagacaccccagtgttctgtgccctggtgaatggt
gacggagaggtgggggatttcctcaggcttccttacttcctgaagaggaggaacgcatgg
agggaggatgaaagggagaaaaagatccacgatattgaaaccctgaagaagtttctgaac
agcaagaagcctcacatcatcgctatagctggggagaacagggacgcccagatggtgatt
gaggacattaaacgcactgccagtgagctggagcaggagtcctccttccccaccatcggg
gtggagctggttgataatgaactggccatgctctacatgaacagcaagaagtcagaggca
gatttccgggactacccccctctcctgagacaggctgtgtctgtggccaggaagatccag
gaccccctggtggagtatgctcaggtgtgcagcagtgacgaagacatcctctgcctcaag
ttacaccctttgcaggagcatgtagtgaaggaggacctgctgaatgctctgtactgtgag
ttcatcaaccgggtgaatgaagtgggtgtggatgtgaaccgggccatggcccacccctac
acccagagcctggtgcagtacgtctgtggcctggggcccaggaagggatcccacctgctc
aggatcctgaagcaaaataacactcgtctggaaaaccgcactcagctggtcaccatgtgt
cacatgggccccaaggtcttcatcaactgtgctggtttcatcaagattgacacagcttca
cttggagacagtactgactcctatattgaggttctggacgggtcgcgggtgcacccagag
acctacgagtgggcaaggaagatggccgtggatgccctggagtacgatgagtcagcggag
gacgccaacccagccggagcactggaggagatcctggaaaacccggagcggctcaaagac
ctagacttggatgcctttgctgaggagctggaaagacagggctatggtaacaagggcatc
accctgtatgacatccgtgctgagctgagctgcaggtacaaagacctgaggtccacctac
agaggacctaacacagaggagatcttcaacctgctcaccaaggagacaccagagaccttt
tacatcggtaaactgatcaccagtgtggtgacaggcattgctcatcggcgcccccagggg
gagagttatgaccaggccataaggaatgatgagacaggtctgtggcagtgtcctttctgt
cagcaggataacttccctgagctcagcgaggtgtggaatcattttgacagtggctcctgc
cctggccaagctattggggtccgctgtcgcatggacaacggagtcaccggttttatccct
accaagttcctcagtgacaaagtggtcaagcaccctgaagaaagggttaaggtgggcatg
acagtgcactgcaggatcatgaagattgacattgagaagctcagtgtggatctgacctgt
cggacgtcagacctgtcggataaaaacaatgagtggaagcttcccaaggacacctactac
gactttgacactgagacagaggatgtgaagcaggaggaggaggccaagaagaaacagcag
agaacaacctacatcaagagggtgatagcccacccatcgttccataacatcaacttcaag
caggcagagaagatgatggagtccatggaccagggagatgtgatcatcaggcccagcagt
aagggagagaaccacctgactgttacttggaaggttgctgatggcatctaccagcacatt
gacgtacgagaggagggcaaggagaatgccttcagcctgggacataccctgtggatcaac
actgaggaatttgaagatctggatgaaatcacagccagatacgttcaaccaatggctgcg
tttgctcgcgatctacttggtcacaagtattttcaagaatgcaatggtggagaccgaaag
aaaatggaggaggtcttagtgaaaagcaagaaggaaaagcctacattcatcccctactat
gtgtctgcctgtagagagctgccagggaagtttctgctcggttaccagccccgcggaaaa
ccaagggttgagtttgtgactgtcacgcctgaggggttcagatacagaggccagattttt
cccacagtcaatggactcttccgctggttcaaagaccatttccaggagccagtggcaggg
attactcccagcagcagcagtagaacacgaaccccagcctctgtcaatgccacgccagcc
aatattaacattgcagatctgactcgtgcagtgaacgccctccctcagaacatgacctct
cagatgttcagtgccattgccgcagtaacgggccagggccagaaccccaacaccacacca
gccggatgggcatccagccagtacggctatactggtggcagcagcggcggaggggggagc
agcagcgcctatcatgtgtttgccacaccagctcagcagccgattgctactccccttctg
acgcccagctattcatacaccacccccacccccagccagcagcagactatcaccacgccc
cagtaccccagcagcactccccagtcctcacacggacatggacaccgcccttcctcctcc
acaccatcatcaacatcctcctcccgccaccacaggacaccaacaccaaaggcaacttcc
cacacagcagtggactggggaaagatggccgagcagtggctccaggagaaagaggcagag
cgcaagaagacgaggcccagaatgaccccacgaccttctcccagccccatgatcgagagc
acgcccatgtccctcgctggagacgccacaccgctgctggatgagatggatcgctag
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integrated database retrieval system
