Oncorhynchus mykiss (rainbow trout): 110507829
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Entry
110507829 CDS
T07259
Name
(RefSeq) Down syndrome cell adhesion molecule homolog isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110507829
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
DSCAM family
110507829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
C2-set_2
Ig_5
C1-set
V-set_CD47
Interfer-bind
Ig_C17orf99
C2-set_3
fn3_2
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
110507829
NCBI-ProteinID:
XP_021443797
Ensembl:
ENSOMYG00000046821
LinkDB
All DBs
Position
27:24000398..24123796
Genome browser
AA seq
2069 aa
AA seq
DB search
MWIFAVIFFQSILNVFSEDLRSSLYFVNASLQEVVFASTTGTLVPCPAAGVPPASLRWYL
ATEEEIYDVPGIRHVHPNGTLQIFNFLPSSFSKLIHDNTYYCTAENPSGKIRSQDVHIKA
VFREPYTVRVEDQKAMRGNVAVFKCIIPASVEAYVTVVSWEKDTVSLSSGPRFLITTTGA
LYILDVQNEDGLYNYRCTTRHRYTGETRQSNSARLFVSDPTNSEPGILDGFDRREVMASH
RVELPCKASGHPMPKYRWLKDNSPLEPDTRFHQSVTGLLIESAQPTDSGTYVCEVWNSYG
NAEVVGRLLVKQPLKAVVSPRKVKGSVGSKVSLHCSVSGSDEYELSWYRNGEIIYPGNSV
RITGISRENLIMEGMAKSDGGAYQCFARKNKMSAQDFVPVILEDGTPKILSSFSEKVVNP
NEPVFLVCNVKGTPPPSCTWNLDDDPVIKDNHHHPGHYETNEGHVVSQLNITHTKEVDGG
VYRCTCRNSAGAVYHQARINVRGAASIRPMKNITAIAGRDAYVHCRVIGYPYYSIKWYKN
SHLLPFNHRQRAFENNGTLKLSNVQELDQGEYNCRVLVKPHQETNQSVHLSVKVPPYIQP
FAFQRFSIGQRVFIPCVVMSGDQPLDITWQKDGRPIPSSLGVTIDNIEFTSSLRISNLSP
DHNGNYTCIARNEAAAVEHQSQLIVRVPPQFVVQPTDQDGIYGKTVTLNCSAEGYPRPTL
VWKHSKGNGVPQFQPIALNSGSRIQLLVNGSLLIKHVLEEDSGYYLCKVSNDVGADVSKS
MYLTVKIPAMITSYPNTTMATVGQQKEMSCTAHGEKPIMVRWEKEERIINPETSRYTVVV
KEVADEVISTLKILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEVEIREVRDR
TIALRWTMGFDGNSPITGYDIECKNKSASWNSAQITKDVSPQLNQATIIDLHPSSTYNIR
IFAKNDIGKSDTSNELTITTDEAAPDGPPQEVQLEATSPQSIKVTWKAPHKHLQNGVIRG
YQVGYREYSSGGSFQFNIISMDTTGDSSESITLDNLRKFTEYGVVVQAANRAGTGPSSQE
VITKTLEDVPSRPPENVLAMAKSPEVISLSWLTLPKEALNGNLQGYRVIYWANLPDGELG
EIRNVTTSYPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDIPGPPAGVKAA
ASTSSVVFVSWLPPLKLNGIIRKYIVFCSNHPTVMSEFEASPDVYFYRVPNLARNRKYSI
WVVAVTAAGRGNSSETITVEPRAKAPARILTFNGTVTTPWMRDIILPCKAVGDPPPTIKW
LKGNNGTPAPVLIDGRHSVHSNASFIIRTVKAEDSGNYSCVASNNWGSDEITLNLQVQVP
PDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLE
NLKCGTWYKFTLTAQNGVGPGRISEIIEAKTHGKEPQFAKEHELFASINSTRVRLNLIGW
NNGGCPITSFTLEYHPMDTATWTTAQRTSLTKSYILYDLAEATWYELQMKVVNSAGSAEK
KIMFATLNADGSTIPPLLKTVDPITDNMSGNEGLKMMVTITCILVAAVMVFILLMVLKRR
RREQRLKRLRDAKSLAEMLMSKNTRTPDTSNKQQPMRMHIDIPRAQLLIEERDTMEIIDD
RSTVLLTDNDFGETSKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTIKTLALSCPDPT
ARRTAKAGPAASRNRYASQWTLNRPQPPTSSHTLSTDWRLPTPRAAGSVDKESDSYSVSP
SQDTGTGLTLCLTYNISLQQRGDHYYCTWKGQSAHDRARSSMVSTESASSTYEELARAYE
HAKMEEHLRHAKFTITECFISDTSSEQMTAGTNDYTDSLASSTPSESGICRFTASPPKPQ
DISRVMNMAAPKAHRPGGELVHLPPYLRMDFLLNRGSVLGGRGSNGGNGGGEAGALGQAC
LEPQKSRTLKRPPLLEPTPMEVPTSREVQQWQPGTASTLPQREPTGREATGDLAQAQAAK
LSSSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atgtggatatttgcagttatctttttccagagcatcttaaatgtttttagtgaagatcta
cgttccagcttatattttgtcaatgcatctttgcaagaggtagtgtttgccagcaccaca
gggaccctggtgccctgtcccgctgcaggggtgccccctgcctcgctgcgctggtatctg
gccaccgaagaggagatctacgatgtgcccgggatccgccacgtgcaccccaatggcacc
ctccagatctttaacttcctcccctccagctttagtaagctaatccatgacaatacctac
tattgcacagctgaaaatccttcaggaaaaataagaagtcaagatgtccacattaaggcc
gtatttcgggaaccctacaccgttcgggtggaggaccagaaagccatgagaggcaatgta
gcggtcttcaagtgcattatccctgcctccgtggaggcttacgtcactgtcgtatcgtgg
gagaaagacacagtctcactatcctcaggacctagatttctcatcacaaccacaggagcc
ttgtatattctggatgtccagaatgaggatggattgtataactaccgctgcaccacacgg
catcgctacacgggcgagaccaggcaaagcaacagcgcacggctttttgtgtcagatccc
actaactcagagccggggattctggatggctttgaccgtcgggaggtcatggcgtcccat
cgggtagagctgccctgtaaggcgtcgggccatcccatgcccaagtaccgctggctgaag
gacaacagccccctggagcccgacacacgtttccaccagagtgtcacgggcttgctgata
gagagcgcccagcccaccgactctggcacctacgtgtgtgaagtgtggaacagctatggc
aacgctgaggtggtgggccggctgcttgtcaaacagcccctgaaggcagtggtcagccca
cgaaaggtgaagggcagcgtggggagtaaggtgtccttgcattgcagtgtcagtggctcg
gatgagtacgagctgtcgtggtaccgtaacggagagatcatctaccccggcaacagcgtg
cggatcacaggcatcagcagggagaacctgatcatggagggcatggccaagagcgacgga
ggggcctaccaatgtttcgccaggaagaacaaaatgtccgctcaggattttgttccggtc
atcttggaggacggcactccgaagattctgtcctccttcagtgagaaggtggtcaacccc
aacgaaccggtcttcctggtgtgtaacgtcaaaggcactccccctccctcctgcacctgg
aacctggacgacgacccggtcatcaaggacaaccaccaccaccccggccactacgagact
aacgagggccacgtggtcagccagctgaacatcactcacactaaggaggtggacggaggg
gtgtatcgctgcacctgcaggaactcggccggggcagtctaccaccaggctcgaataaac
gtaagaggggctgccagcatccgtccaatgaaaaacatcacggccatcgcagggcgggac
gcgtacgtccactgtcgcgttattggctacccatattattccatcaagtggtataagaac
tcccacctgctccccttcaaccacaggcagagggcctttgagaacaacggcactctgaag
ctgtctaacgtgcaggagctggaccagggagagtacaattgcagggtattggtcaaacct
caccaagagaccaatcagagtgtccatctcagtgtcaaagttccaccatacatccagccc
tttgcattccagcggttctccattggccagcgtgtcttcatcccctgcgtggtaatgtca
ggtgaccagcccctggacatcacatggcagaaggacgggcggccaatcccttccagtctg
ggggtcaccattgacaacatagagttcaccagctcactgcggatctccaacctgtcccca
gaccacaacggaaactacacctgcattgcacgcaacgaggctgcagccgttgagcaccag
agtcagctcattgtcagggttcctccccagtttgtggtgcagcccacagaccaggatggg
atctatggcaaaactgtgacactaaactgctctgctgagggttatccacgccccaccctc
gtatggaaacactccaaaggtaacggggttccccagttccagcccatcgccctgaactct
ggctcccgtatccagctgctggtcaatggctctctgctaatcaaacacgtgctagaggag
gacagcggctactacctgtgtaaggtcagcaacgatgtgggagctgacgttagcaagtcc
atgtacctcaccgtcaaaatcccagccatgatcacgtcgtaccccaacaccaccatggcc
acggtgggccagcagaaggagatgagctgcacggcccacggggagaagcccatcatggtg
cgctgggagaaggaggaacgcatcatcaacccagagaccagccgctacaccgtcgtggtc
aaagaggtggctgacgaggtcatctccactctgaagattttgcccactgttcgggaagat
tctggattcttctcctgccatgccatcaactcctatggtgaagacagagggatcattcag
ttaacagtacaagaacctccagaccctcccgaggtggagatccgagaggtcagagaccgg
accattgccctccgctggaccatgggcttcgacggaaacagccctatcacaggatatgac
attgagtgcaagaacaaatcagcctcgtggaattcagcccagataaccaaagacgtgtcc
ccccagctgaaccaggccaccattatagacctgcacccctcctccacctacaacatccgc
atttttgccaagaacgacatcggcaagagcgataccagcaacgagctcactatcaccact
gatgaagcagcccctgatggccctccacaagaagtacaactggaggccacctctccacaa
agcatcaaagtcacctggaaggccccccacaagcaccttcagaatggggtgatccggggc
taccaggtgggttacagagagtacagctctggaggcagcttccagtttaacatcatcagc
atggacaccacaggggacagcagtgagagcatcaccctggacaacctgaggaagttcact
gagtacggggtggtggtgcaggcggctaaccgtgcaggcaccgggccctcctctcaggag
gtcatcaccaaaacactggaggatgtcccctcgcgtccccctgagaatgtcctggccatg
gccaagtctccagaagtcatctctctttcctggttgaccctgcccaaagaggccctcaat
ggaaacctgcagggctacagagtcatctactgggccaatctgccagatggagagttggga
gagatcaggaacgtgaccacctcctacccgtctctggaactggatggtctggagaaatac
accaactacagcatccaggttctggccttcacccgggccggggacggggtgcgcagcgag
cagatcttcacccggaccaaggaagacatccctgggcctccagcgggggttaaggccgca
gcctccaccagctccgtggtgtttgtgtcctggctccctcctctcaaactcaacggcatc
attaggaagtacatcgtcttctgctccaaccaccccactgtgatgagtgagtttgaggct
tctcctgatgtatatttctacagagtgccaaacctggcccgcaacaggaagtacagcatc
tgggtggttgccgtgacagccgctgggcgaggcaacagcagtgagaccatcacagtggaa
cctcgggccaaagctccggccaggatcctgacgttcaacggaacagtgactacaccctgg
atgagggacatcattctgccctgcaaggcggtcggagatccaccccccaccatcaagtgg
ctaaagggaaacaatggtacccctgctcctgttctgattgacggacgccacagtgtccat
agcaacgctagtttcatcatccggacggtgaaagcagaggactctgggaactacagctgt
gtggccagcaacaactggggctctgatgaaatcacgctgaacctgcaggttcaagttcct
ccagaccaaccacgcctcacagttaccaagacaactaccacgtcaatcactctgtcctgg
atacctggggacaatggaggaagctccatcagaggctacatcctgcagtactcagaggac
aacagtgagcagtggggcagctttcccatcagccctagtgagcggtcgtaccgtctggag
aacctgaagtgtggcacctggtacaagttcaccctgactgctcagaacggagtgggcccc
ggacgcatcagtgagatcattgaagcaaagacccacggaaaagagccccagtttgccaaa
gaacatgagctgtttgccagcatcaactccacccgggtcaggctcaatctaattgggtgg
aacaatggtggctgcccaatcacctcgttcaccctggagtaccatccgatggacacggca
acgtggaccacggctcagcgcacctccctaaccaagagctacatcctgtatgacctggcg
gaggcaacctggtacgagctgcagatgaaagtggtcaatagcgccggctccgccgagaag
aagatcatgtttgccacgctcaacgccgatggaagcaccatccctcctctgttgaagaca
gtggaccccatcacagacaacatgtcaggcaacgaggggctgaagatgatggtgaccatc
acctgtatcctggtggctgctgtcatggtcttcatcctcctgatggtgctgaagaggcgg
aggagggagcagaggctcaagaggctacgcgatgcaaaaagcctggcagaaatgctgatg
agtaaaaacacacggacaccagacacatccaacaagcagcagcccatgagaatgcacatc
gatatcccccgagcccagctgctcatcgaggagagagatactatggagattattgacgac
aggtcgacggtgctgctgacagataatgactttggggagacgtccaaacagaagtcgtcc
acggtcacgcacacagtccattaccagtccctgtcacaggccaccggcccgctggtggac
gtctccgacgcccggcctggaaccataaagaccttggccctttcatgcccagaccccaca
gcacgccgcactgccaaagcaggccctgcagccagcaggaaccgctatgccagccagtgg
actctgaaccggccacaaccacccacctcctcccacaccctgagcacagactggagactg
cccacaccgcgtgctgccggctctgtggacaaggagagcgacagctacagtgtcagccca
tcgcaggacacaggtactggactgaccctatgtctcacatacaacattagtctgcagcaa
aggggagaccactactactgtacgtggaagggtcagagtgctcacgaccgcgcgcggagc
agcatggtgtcgacggagagcgcgtcgtccacgtacgaggagctggcccgggcctacgag
cacgccaagatggaggagcacctgcggcacgccaagttcactatcacagagtgcttcatc
tccgacacctcctcggagcaaatgacagccggcaccaacgactacacagacagcctggca
tctagcacgccgtctgagtcaggcatctgcaggttcacagcctccccgcccaagcctcag
gacatcagccgggtcatgaacatggccgcaccaaaggcccacagaccgggtggagagctg
gtgcacctgcccccgtacctacgcatggacttcctgttaaaccgtggctctgtgttggga
ggccgggggtccaacggtggtaacggaggaggggaggcaggggcgttgggccaggcgtgt
ctggagccccagaagagccgcaccctgaaacggcccccgctcctggagcccacacccatg
gaggtgcccacgtccagggaggtgcagcagtggcagccagggactgcctccaccctgccc
cagcgtgagcccactggccgtgaggccaccggagacctggcccaggcacaggccgccaag
ctcagtagctcacaggagtccctgctagattccagaggacacttaaaacagagcaacaac
ccctacgcaaagtcctacacactggtataa
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integrated database retrieval system
