Oncorhynchus mykiss (rainbow trout): 110507877
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Entry
110507877 CDS
T07259
Name
(RefSeq) LIM/homeobox protein Lhx1
KO
K09372
LIM homeobox protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110507877
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
110507877
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
110507877
NCBI-ProteinID:
XP_021443937
Ensembl:
ENSOMYG00000027863
UniProt:
A0A8C7RZV4
LinkDB
All DBs
Position
27:complement(26619306..26629186)
Genome browser
AA seq
405 aa
AA seq
DB search
MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRRFG
TKCAGCSQGISPNDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLT
HSNGKDTNLLSVTACSDPSLSPDSQDQLQDDVKDTEIANLSDKETGSNENDGENLGGKRR
GPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQL
SALGARRHAFFRSPRRMRTLVDRLEPGELIPNGPFSYYGDYQSEYYGPGGNYDFFPQGPP
SSQAQTPIDLPFVPSSGPTGTPLGGMDHPLPGHHPSSEVQRYSDIMSHHPGDSPSPEPGI
PGPMHSISSEVYGPSPPFTSLSLNGSGYGNHLSHAPSEMNEGTVW
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggtccactgtgccgggtgcgagaggcctatactggacaggtttctcctcaatgttctg
gacagagcgtggcacgtcaagtgcgtacagtgctgcgagtgtaaatgcaatttaacagag
aaatgcttttctcgagaggggaaactatactgcaaaaacgacttctttaggaggttcggg
acaaagtgcgcgggctgttctcagggcatctcgccgaacgacttggtccggagggcaagg
agcaaagtgtttcatctcaactgcttcacctgcatgatgtgtaacaaacagctgtccacg
ggagaggagctctacatcatagacgaaaacaaatttgtctgcaaagaagattatctaacc
catagcaatgggaaagacacaaaccttctctcagtaacagcatgtagcgatccaagttta
tcaccagattctcaagaccagttacaggacgatgtaaaggacactgaaatagccaatttg
tcggacaaagaaacgggtagtaatgagaacgatggcgaaaaccttggcggtaaacgacgt
ggaccgcgaaccaccatcaaggcaaagcaactggagaccctgaaagcggccttcgctgcc
acccccaaacccacaagacacatcagggagcagctcgcgcaggagacggggctgaacatg
agagtaattcaggtatggtttcagaaccggcggtctaaagagcgacgcatgaagcaattg
agcgccctgggcgcgagacggcacgcgttcttccggagcccgaggagaatgagaacgcta
gtggaccggctggaacccggggaattaattccaaacggtcctttctcttactacggagat
tatcagagcgagtactacggaccaggagggaactacgacttctttcctcaggggcctcca
tcgtcgcaggcacagacccccatagacctccccttcgtgccctcctcaggccccacaggc
acccctctaggtggtatggaccatcccctgcccgggcaccacccctccagtgaggtgcag
cgctattctgacatcatgtcccaccaccctggggactcacccagcccggagccaggcatc
ccggggcccatgcacagcatctcctctgaggtgtacggccccagcccaccctttacctca
ctatccctcaatggcagcggatacggcaaccacctgtcccatgcaccctcggaaatgaat
gagggcaccgtctggtag
DBGET
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