Oncorhynchus mykiss (rainbow trout): 110507948
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Entry
110507948 CDS
T07259
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110507948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110507948
Membrane trafficking [BR:
omy04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
110507948
Endosome - Golgi transport
Arf GTPase associated proteins
110507948
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
110507948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
RA
SAM_1
PH_11
SAM_2
PH_3
PH_6
PH_8
PH_13
PH_9
Motif
Other DBs
NCBI-GeneID:
110507948
NCBI-ProteinID:
XP_036821129
UniProt:
A0A8K9XZP7
LinkDB
All DBs
Position
27:36707926..36863967
Genome browser
AA seq
1662 aa
AA seq
DB search
MSEAEGCVSLWEWLCVLHLDQYFPVFQDAGFGTLLECQGLTQDQLETIGITLPGHRKRIL
ASLQKTLHTNTHTHPESEPDALHTHLAAEGDQREEERAVFTDRPSPVGSERPVPAQRPVS
RGERPVPAQRPVLRGERPVPAQRPVPKERSVSREGERDGERPVPAQRPVPKERTKYRSVP
VETLDCVQTYPRPNTSPCPTTPHSSAQDSPLPPIPPRSTPNCPPLRFIHTSPKNSPTAPK
PRSEHNNLNTPITVPPPILTTNPLTLPSPRPCPAPLAIYPPARHSQQVWEGGRKHSPGSP
SSSSSSSSSFERYDQSSSDQGVPPLPPKVYVVGAGPKEPHSPAPIPHRPPVLPSRTTPTQ
SDAPINEPHTDRTPPPPPRTKVPNTPVDTQPALPMRRIPLPRPEIRSDDSSDDYEDPDQV
FPKPQAVNLAEDPDQVFPKPQAVNLAEDPDQIYSKLQSVNMADRDVFLPVPGWGKGRYNS
LCSDDELLDDDNEPISSHRSSWQDYGLSTLQGSVYLPVRGRVLAPPPRDGPSPETCPVLK
IGWLDKNPTQGSLYYQRRWVKLDVDYLRYFDNDKEVYSKRIIPTAAITGVTNVGEQKFEV
VTANRTFLFKAESDSERNEWVAVLQNFTRGRQEGSREMTSLVPPSFLTPGSPLTPEQQGY
LELRGLRSKLYTVVSGDKVFLYKNMEDYRLGIGITSIDMNVGNVKVTDRRSFDLTTPYRI
FSFLADSEQHKEQWVEAMRDAIGEALSNSEVANQIWAEPSNGCCADCGAAKPEWAAINLC
VVVCKRCAGEHRGLGPSISKVRSLKMDRKVWTEELIQVFLLLGNERLNRFWAANVPPSEA
LSPTSCCEDRRRFISSKYRQGKYRKYHPLYGNQRELNNALCINVQCSDVLETLCLVFCGA
DVNCSTGQTDCPSPLSLALAHNQKLQAQFLSHNLNTELPRSEVTGDMEPQHYSPQHPVTH
NGFLFKTASMVRPITERKAREEFSRRWCMLNDGNFSYYESDKTSTPNGALKSTEIVCLSV
NTPERHGYDHTFELYSDSERLYLFGTDDQDSHKEWVKSITKMFIPSNAEALLRLSFERIG
RLKYKDGLNLQSPRVGWFALVGSSLHAYLEDSEEEEEIHLRKLQELSIQQENEVLVLVER
GRTLYIEGERKLDFQGWCVGIQKAAGSAGDSLSQQQLTEADIPVIVDRCIDYITQCGLTS
EGIYRKSGVNSRVAALCEAFRRDARNVRLKEEEHQVDDVSNTLKRFFRESGEGLFTIQAA
STWLSTPVIPEESKKISQYQLLLSRLPRVNKATLRALVNHLYCVQRFAELNQMNLHNLAI
VFGPTLFQTDGKDYTAGRVVEELIEHYTDVFEVDEQQLKRQLDEITVIIKVREKLNLNSS
VPASGSAGDFICTVYLEEKKETAEQHVKIPGSMTAAELTCEILDRRKIQVREKDYWSCWE
VSQKEETERPLHHLERVLPILHSLGTDSHLLVKKNLAMEAILVYLASKVDVSKHGMVKFR
EERSILGLGLNTGSFHDRYFILNTVSLRMYKEVRSNRSEREWQVKNLRVYLGIKKKLRPP
TCWGLTVIYKSEKQEKPEKQQWYLCCDTQTEMREWFSTFLTVQYDGNVWPVDAVQTRVTR
ALPVDTRHGNVALIPLRGSENEMRNSVAAFTADPLGGRDHQL
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggcggaggggtgtgtgtcgttgtgggagtggctgtgtgtgctgcatctggac
cagtatttcccagtgttccaggacgcggggtttggaacgctgttggaatgccaagggctg
acccaggatcagctggagacgattggaatcacattgcctggacaccgtaaacgcatccta
gccagcctgcaaaaaacactccacacaaacactcacacacacccagagagcgagcccgac
gctctacacacacacctggctgcagagggagaccagagagaggaagagagagcagtgttc
acagacagacccagccctgtggggagtgagagaccagtccctgcacagagaccagtgtcc
agaggagagagaccagtccctgcacagagaccagtccttagaggagagagaccagtccct
gcacagagaccagtccctaaggagagatcagtgtccagggaaggagagagggatggagag
agaccagtccctgcacagagaccagtccctaaggagagaactaagtaccgctctgtccct
gtggagacattggactgtgtccagacttaccctcgtcccaacactagcccctgccctacc
accccccattctagtgcccaggactcccctttaccccccatcccacctcgcagcactcca
aactgccccccactacgcttcatccacacctcccctaaaaactcccccactgcacccaaa
cccagatctgaacataacaacttaaacaccccaatcactgtacctcctcctatccttacc
accaatcccctcaccttaccctcccccaggccctgtcctgcacctctggctatctaccca
ccagccagacactcccagcaggtgtgggagggaggaagaaagcactctcctggttccccc
tcatcctcatcctcctcttcctcctcatttgaacgatatgaccagtcatcatctgatcaa
ggcgtgcctcccctcccccctaaagtctatgtggtgggggcgggccctaaagagcctcat
agtcctgctccaatcccacatcgacctcctgtcttgccctccagaaccacacccacacag
agtgatgctcccatcaatgagccgcacacggaccgaactccaccacccccgcctcggacc
aaggtacccaatacaccagtcgacacgcagcctgctctgcccatgagaaggatccccctg
ccacggcctgaaatcaggtcagatgacagttcagatgactatgaagatccagaccaagtc
ttccccaagccccaggctgtgaacctggcagaagatccagaccaagtcttccctaaaccc
caggctgtgaacctggcagaagatccagaccaaatctactccaagctccagtctgtgaac
atggcagacagagatgtgttcctgccagtgccggggtgggggaagggacggtacaactct
ctctgcagcgacgatgaactattggatgatgacaatgagccaatcagcagccatcggagc
tcatggcaggactatggtctgagtacgctccagggtagtgtctacctgccggtcagaggc
agggtccttgccccaccccctagagatggcccctcccctgaaacctgccctgttctaaag
attggctggctggataagaacccaacccaggggtctctgtactaccagaggagatgggtg
aagctggatgttgactacctgagatactttgacaacgacaaggaggtatactctaagagg
atcataccaacggctgccattacgggggtgaccaacgtgggggagcagaagtttgaggtg
gtcacagccaaccgaacctttctcttcaaagccgagagcgactctgagaggaatgagtgg
gtggcagtgctgcagaacttcactagggggcgccaggaaggcagcagggagatgacctca
ttggtcccgccctcctttctgacccctggttcacccctgacccctgaacagcagggctac
ctggagctgaggggcctgcgctccaaactctacacagtcgtctccggagacaaggtcttc
ctctacaagaacatggaggactaccgccttggcatcggtatcacgtctatcgacatgaat
gtaggaaacgtgaaagtcactgaccgccgcagttttgatttgaccacaccctaccgcatc
ttcagttttctagcggattcggaacaacataaggagcagtgggtagaagcaatgcgtgac
gcaattggagaagctctgtccaatagcgaggtggctaatcaaatctgggcggagcctagc
aacggttgctgtgccgactgtggcgccgccaaacctgagtgggctgccatcaacctgtgt
gtggtggtctgcaaacgctgtgcaggagagcatcggggtttgggccccagcatctctaag
gtgcgcagtctgaagatggacaggaaggtgtggacagaggagcttatacaggtgttcctg
ttgctaggaaacgagcgtctgaacaggttctgggcggcgaacgtccctcccagcgaggcg
ctgagtccgaccagctgctgcgaagaccgccgccgattcatcagctccaaatacagacaa
ggcaaataccgcaaatatcaccccctctacggcaaccagagagagctcaacaacgccctg
tgtataaacgtgcagtgcagtgatgtgctggaaacgttgtgtctggtgttctgtggagct
gatgtgaactgttctactggccagactgactgtccctcccccctctccctggcacttgca
cacaaccagaaactacaggcccagttcctctctcacaacctcaacacagagctgcctcgg
tcggaggtgactggggacatggagcctcaacactattcaccacagcaccccgtcactcac
aatggcttccttttcaagaccgcctccatggtccggcctattacggagcgcaaggccagg
gaggagttcagtcgtcgctggtgtatgttaaatgatgggaactttagttactacgagagt
gacaagacctccacgcccaacggtgccctgaagtctacagagatagtctgtctgtctgtc
aacacaccagagagacatggctatgaccatacgtttgagctgtactctgactcagagcgt
ctctatctgtttggaactgatgaccaagacagccacaaggagtgggtcaaatccatcacc
aagatgtttattccgtccaatgcagaggctctattgagactgagctttgagcggattggc
cggctgaagtacaaggacgggttgaacctacagagccctcgggttggctggtttgcgctg
gttggctcctccctccatgcctacctggaggacagtgaggaagaggaggagatacaccta
cgcaaactgcaggagctctcgatccagcaggagaatgaggtgctggttctggtggagaga
ggcaggacactgtacatcgagggggagaggaagcttgacttccagggttggtgtgtgggc
atccagaaagcagcaggcagtgcaggagactctcttagtcagcagcaactaactgaggcc
gacatccctgttatagtggaccgctgcattgactatatcacacagtgcggtctgacgtct
gagggtatctaccgtaagagcggtgtgaacagtcgcgtggcggcgctgtgcgaggcgttt
cggcgtgatgcccgtaatgtgcgtctgaaggaggaggagcaccaggtggacgacgtgtct
aacacactgaaacgcttcttcagagagtctggagagggcctgttcaccatacaggctgct
agcacatggctcagcacacctgtgatcccagaggagagcaagaagatctctcagtaccag
ctgctgctgagccgcctgcccagagtcaacaaggccacgctacgagccctggtcaaccac
ctctactgtgtgcagcggtttgcagagctgaaccagatgaatctccataacctggctata
gtatttggcccaacactgttccagaccgacgggaaggactacacagctggacgcgtcgta
gaggaactcatagagcactacacggacgtctttgaggtggatgagcagcagctgaaaagg
cagctggatgagatcacggtcatcattaaagttagagagaagttgaacctcaactccagc
gttcctgcgtcggggtcagcaggtgacttcatctgtacagtgtacctagaggagaagaag
gagacggcagagcagcatgtcaagatccctggttctatgacggcagcagagctgacctgt
gagattctggaccggcggaagatccaggtcagagagaaagactactggagctgctgggag
gtcagccagaaggaggagaccgagcgtccgttgcatcatctggagcgtgtgttacccatc
ctacactctctgggtaccgactcccacctgctggtcaaaaagaacctggccatggaggcc
atactggtctacctggccagtaaagtggatgtgtccaagcacgggatggtgaagttccgg
gaggagaggagcattctgggattgggactgaacaccggcagcttccacgaccgctacttc
atcctaaacactgtctccctcaggatgtacaaggaagtgcggagtaatcgttcagagagg
gaatggcaggtgaagaatctgagggtctatctaggcatcaagaagaaactacgaccaccc
acctgctggggtctgactgtgatctataaaagtgaaaaacaggagaagccagagaagcag
caatggtatctgtgttgtgacactcagacagagatgagggagtggttctccaccttcctc
actgtccagtatgatggtaacgtgtggccagtggatgcagtccaaacacgtgtgacccgt
gcgttgccggtggatacgcgtcatggtaacgtggcattgattccgttgcgcggcagcgag
aatgagatgcggaacagcgttgcagctttcactgccgacccgcttggcgggagagaccac
cagctatag
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integrated database retrieval system
