Oncorhynchus mykiss (rainbow trout): 110507950
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Entry
110507950 CDS
T07259
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110507950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omy03400
]
110507950
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
110507950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
110507950
NCBI-ProteinID:
XP_036794515
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All DBs
Position
2:complement(14940678..14974356)
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AA seq
941 aa
AA seq
DB search
MRRSGAPSQVFGNMAKKPRFVPPGASLAGRPDPPVGTLLEPEPLAPKLSTGNVLYKIQRS
LSAPAPPLALPVKAFSLAKSSPQAPGLSRALARVLGAADSKKNELEPEDPSFTEENTGDP
ADFRCSSQSPAGGCGPVGVGAGSGSGAGSDGPRYFSVMWCKASGRKHKRWQGDAVLVTRG
RTATLKDMEGKDIGKGSGYKVSELASLGEGETLMIGAKQVEVMGLVSELDYNKGRCFLDV
HVEKEEPKISAPPPSRRPASKPFCRPTLLGGETDRGVAKPQEEVPCKPRHDPLAPGAIVM
PRPSTNHQWTYNKAGLPLVDVVVDPYLTTHLRPHQRDGLLFLYECVMGMRATCRYGAILA
DEMGLGKTLQSVALTWTLLKQGPYGGKPVAKLVLVVAPGSLVQNWGAEFKKWLGRERINV
YTVNQDHRVELFAASPLHSVLVISYEMLLRSLEVVQKLEFGLVICDEGHRLKNSSIKTSS
ALSGLSCTRRVILTGTPVQNDLQEFYAIIEFVNPGILGSSAAYRKVYEEPILRSRQPICT
EEERVLGEERAAELSRLTGLFILRRTQEIINRYLPPRLDWTVFCSPSPLQRELYQVLLSH
RVIRACLQGSTQTHTHLACITALKKLCNHPGLLYSTVQERSDGSSAEGSLYEGLRGVFPE
SYSSGGFSTADSGKLLVLSDLLTTIHHLSPTDRVVLVSNYTQTLDLLQDLCVHLGYTYCR
LDGNTPTIQRQRLVDNFNSPHSAHFLFLLSSKAGGLGLNLIGASHLVLYDIDWNPANDIQ
AMSRVWRDGQKKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKGAEHTSFSSNEL
RDLFSLTDTPCLTHDLLHCSCSMDGSAPEEGEDEAPASDRPCQLGRQGDRGGAGQKHLSM
SELMQWRHFAGDTHTFRDAYLDHARTHISFAFQSTISHITQ
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgctcaggggcccccagccaggtctttggtaacatggcgaagaagccccgattc
gtccctcctggagcctcactggctggtcgtcctgatccccctgtgggtactctgcttgaa
ccggagcctctggcccctaaactctccacggggaacgtgctctacaagatccagaggagc
ctctcagcccctgcaccgccccttgccctgcctgtgaaggccttcagcctggctaagagc
agcccccaagccccaggcttgtccagagctctagccagggtgctaggtgcagcagacagt
aagaagaacgagctagagcctgaagacccttcctttacagaggagaacactggagaccca
gctgatttcagatgttcctcacagagtccggcaggaggctgtggtccagttggggtcggg
gcagggtctggtagcggtgctggttctgacgggccgcggtacttcagtgtgatgtggtgt
aaggccagtgggaggaaacacaaacgctggcagggagacgctgtcctggtgacacgaggg
cgtaccgccacgcttaaagacatggagggcaaggacatcggcaagggtagtggctataag
gtatcagagctggcatcgctgggtgaaggagagaccttgatgataggagctaaacaggtg
gaggtgatgggactcgtatcagagctggactacaataagggccgctgtttccttgacgtc
catgtggagaaggaggagcctaagatatcagctcctcccccctcacgacgcccagcttcc
aaaccgttctgccgtccgacgctattgggcggagagactgataggggagtggccaagcct
caggaggaggtgccctgtaaaccacgccatgaccctctagcaccaggagccattgtcatg
ccccggccctcaaccaatcaccagtggacgtataacaaggcaggcctcccactggtggac
gtggtggttgacccctacttgaccactcacctccgaccccaccagcgagacggcctgcta
ttcctctacgagtgtgtcatggggatgagggctacatgtaggtacggtgctatcctggca
gatgagatgggtctgggtaagaccctccagagcgtggctttgacatggacgctgctaaag
cagggcccatacggcgggaagccggttgctaagcttgtgctggtggttgcccctggcagc
ctggtgcagaactggggggcggagtttaagaagtggcttggccgtgagaggatcaacgtc
tacactgttaaccaggaccacagggtggagctgtttgcagcgtctcctctccacagtgta
ttagtgatcagctatgagatgctgcttcgctctctggaagtggtacagaagctggagttt
gggctggtgatctgtgatgagggtcacaggttgaagaacagcagcatcaagacttcctct
gccctcagcggtctcagctgtacacgcagagttattctgacaggtactcctgtccagaat
gacctgcaggagttctatgccatcatagagtttgtgaacccgggcattctggggtcgtct
gctgcctacaggaaggtgtacgaggagccaatcctccgctcccgacagcccatctgcact
gaggaggagagagttttgggggaggagcgagcggctgagctctctcgtctgactggtctg
tttattctgaggcggacccaagagatcatcaaccgctacctgccgcctcgtcttgattgg
acagtgttctgtagcccctcccccttgcagcgggagctgtaccaggttctcctctcgcac
cgtgtcatccgggcctgtctacaggggtcgacacagactcacacacacctcgcctgcatc
accgccctgaaaaagctctgcaaccacccaggactgctctactccactgtacaggagcgt
tctgatggcagctcagcagagggttctctgtatgaagggctaagaggtgtctttccagag
tcttactcttctgggggcttcagtacagctgactcagggaaactactggtcctgtctgac
cttctgaccactattcaccacctcagccctactgacagggtggtgttggtgtccaactac
actcagacgttagacctactccaggacctgtgtgtccacctgggctacacctactgtcgc
ctggacggcaacacccccaccatccagaggcagcgattggtggacaacttcaacagccct
cactccgcccacttcctcttcctcctgagttctaaagccggagggttggggcttaacctg
atcggcgcctcccacctggtcctatacgacatcgactggaaccctgccaacgatatacag
gcaatgtcacgagtgtggagagacggacagaagaagactgttcacatctaccgcctgctc
actgcaggtaccatagaggagcgtatcttccagaggcaggtgtccaaacaggggctttct
gggacagtggtggacttggggaaaggggcggagcacaccagcttctcctccaatgagctg
cgagatctcttcagtctgacggacacaccctgtctcactcacgacctgctacactgcagc
tgcagtatggacggatcagccccggaagaaggagaggatgaggcacctgcgtctgatagg
ccgtgccagctgggtcgtcaaggtgaccgtggtggggcggggcagaagcatctgagcatg
tcagagctgatgcagtggagacacttcgcaggggacacacacaccttcagagatgcttac
ctggaccatgcacgaacccacatctccttcgccttccagtccaccatctcacacatcact
caataa
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