Oncorhynchus mykiss (rainbow trout): 110507965 Help Entry 110507965         CDS       T07259                                  Symbol robo1 Name (RefSeq) roundabout homolog 1 isoform X1   KO K06753   roundabout, axon guidance receptor 1 Organism omy  Oncorhynchus mykiss (rainbow trout) Pathway omy04517   IgSF CAM signaling Brite KEGG Orthology (KO) [BR:omy00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     110507965 (robo1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:omy04515]     110507965 (robo1) Cell adhesion molecules [BR:omy04515]  Immunoglobulin superfamily   ROBO family    110507965 (robo1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  I-set Ig_3 ig Ig_2 V-set fn3 C2-set_2 Ig_5 FN3_DSCAM-DSCAML_C Pur_ac_phosph_N Unc5_NetrinR_N Ig_PDGFR_d4 Toxin_19 Motif Other DBs NCBI-GeneID:  110507965 NCBI-ProteinID:  XP_036820803 LinkDB All DBs Position 27:33391192..33935721 Genome browser AA seq 1700 aa AA seqDB search MGIGSWALAMSSDESVPVVSVPVVLFPTDTGAATEEGASEGAMPAPTSEHEDDNSLGYTG SRLRQEDSPPRIVEHPSDLIVSKGEPATLNCKAEGRPSPTVEWYKDGERVETDRDNPRSQ RMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSHNASLEVALLRDDFRQNPAD IMVAAGEPAVLECMPPRGHPEPSISWKKDGANIDDRDERITIRGGKLMITNARKSDAGKY VCVGTNMVGERESEIAELTVLERPSFVKRPGSQVVLVDQSVEFRCEARGDPVPTVRWRKE DGELPKGRYEIREDHTLKIRRLTSADMGSYTCVAENMVGRAEASATLTVHVPPVFVVRPR NQVVAVGRTVTFQCEATGNPQPAIFWQREGSQNLLFSYQPPQPSSRVSVSQTGDLTITDA ERSDVGYYSCQALNIAGSVITKALLEVTDVVSDRPPPVVRQGPTNQTVSVDGTVVLSCLA TGKPTPTIMWRKDGVLVSTHDSRVKQLDTGALQIRYAKLGDTGMYTCIASTPSGEASWKA YLDVQEFGVPVQPARPTDPNLIPSAPFKPEVTDVTRTSVTLSWKPNFSGATPTSYIIEAF SHASGSSWQTLAEHVKTESYVLKGLKASAVYLFLVRAANAYGLSDPSPITDTVKTQDIPP TSQGVDHRQIQRELGEVVIHLHNPTILSSSSVRVQWTVEQQSQYIQGYKVMYRASPEGQQ RSDWAVFEVRTPGEDSTVVPQLRKGVTYEFKVRPFFNEFQGTDSEVKIAKTLEEAPSAAP RGVTVTESGDNGTAIMVSWQPPPEEEQNGVVQEYKIWCLGNESRYHINRTVDGSTFSLLI PSLAPGIRYSVEVAASTGAGPGVKSDVTFFQIDSSGHVTEGVLEPENTLSQQISEVVKQP AFIAGIGAACWIILMVFSIWLYRQRKKRSGLSTNYAGIRKVPSFTFTPTVAYQRGGEAVS SAGRPGLLNIGESATQPWLADTWPNSCSNHNDCSMNCCTAGQGNSDSNLATYSRPADCIA NYNNQMESKQTNLMVPEGGVYGDVDLSNKINEMKTFNSPNLKDGRFVGPGGQPTPYATTQ LIQSSILGNNINTDRGVGGGGGGGGGGETNEKHGWKPNPVQGQKQQEMTSQLHQYNIMEQ NKLNKDHYRGGDSPMATTIPYNQAHEAHTVGSHNSSDHGSCSTSGSQGQKKGVRTPKLPK QSAMNWADLLPPPPANPPPCRNMEEYSLSMNESYDPDMQCSLPPSRMYLQPDELEEEEEM ERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDTTDSMVSGHERRRHVVSP PPRPLSPSHTYGYISSPMSLDTDGMEEEEEEMLEEEEEEEEGDKTDAEVAKVHHHHTHPH HPHHPHHPQQMHTRRLLLRGLEQTPASSVGDLESSMTGSMINGWGSASEEDNASSGRSSA VSSSDGSFFTDADFAQAVAAAAEYAGLKVAKYPNPTQGQEGGPGARKYQMTPSGHRPGSP PSTDSNMSTANMHKRPPKKQKQHPAASHPGLQRREAYAEDLPPPPIPPPAGLKSPTHPSK TALEARGMMSPKAGEGRDRRGDSGGGYRPREGSDPRTSSSERRETQDRQKIPRAGKGNKQ EGGSTKARQHPGPEDILPYSRPSFPTVHSPRDRDPSSSSSMSSRGSGGRRRGEGGPGARR IPNDMGAFQPGDDDLEMVET NT seq 5103 nt NT seq  +upstreamnt  +downstreamnt atgggcatagggtcatgggcactggccatgtccagtgatgagagtgtgccagtggtctca gtccctgtggtgttatttccgacagacacgggcgcggccactgaggaaggggccagtgaa ggggccatgccggcccccacctcagaacacgaggatgacaactccctgggctacacagga tcccgtctgcgccaggaggactccccaccccggatcgtagagcacccctctgacctgatc gtgtccaagggggagcccgccaccctcaactgcaaggcggaggggcggcccagccccacg gtggagtggtacaaggacggggagcgggtagaaacggaccgggacaaccctcgatctcaa cgcatgctgctgcccagcggctccctcttcttcctacgtatcgtccacggacgacgctcc aaaccggatgagggctcctacgtctgcgtcgcccgcaactacctgggagaagctgtcagc cacaacgcctcgttggaagtagcattactacgtgatgacttcagacagaaccctgctgat ataatggtggcagcgggtgagcctgcagtcctagagtgtatgccccctcgcgggcatcct gaacctagcatatcctggaagaaggacggagccaacattgatgacagagatgaacgaatc actatccggggaggaaagctgatgataaccaatgccagaaaaagcgatgctgggaagtat gtgtgtgtcgggaccaacatggtgggagagagggagagtgagattgctgagctgactgtg ctcgagcgacccagctttgtgaagcgtcccggcagccaggtggtgctggtggaccagagc gtggagttcaggtgtgaggcccggggcgacccggttcccactgtccgctggaggaaagag gacggagagctgcctaagggaagatatgagattcgtgaggaccacaccctgaagatccgt cgtctgacctctgcagacatgggttcttacacctgcgtggcagagaacatggtgggcagg gcggaggcgtcggccaccctcaccgtccacgtgcctcctgtgtttgtggtgcggcccagg aaccaggtggtggcggtggggaggaccgtcaccttccagtgtgaggcaacaggaaaccct caacctgctatcttctggcagagagagggcagccagaacctgctcttctcctaccagccc ccccagccgtctagtcgcgtctccgtctcccagacgggggacctgactatcacagatgca gagcgctcagacgtgggctactacagctgccaggccctcaacatcgctggctctgtcatc accaaggccctgctggaggtcactgacgttgtgtctgatcgcccacctccagttgtccgc cagggtccgaccaatcagacagtctctgtggacgggacggtggttctgagttgcctagca acgggtaagcccacccccaccatcatgtggaggaaggatggggtgttggtgtccactcac gactcccgggtcaaacagctggacacgggcgcactgcagatccgctacgccaagctgggt gacacaggcatgtacacatgcatcgcctccactcccagtggcgaagcctcgtggaaggcc tatctggatgttcaagagtttggtgttccagtgcagccggccagacccactgaccccaac ctgatccccagcgcccccttcaaacctgaggtcactgacgtcacccgcacctccgtcact ctgtcctggaagcccaacttctcaggagccacgcccacctcctacatcatagaggccttc agtcatgcgtcaggcagcagttggcagaccctggcagaacatgtgaagaccgagtcgtat gtactgaagggcctgaaagccagtgctgtctatctcttcctggtccgagctgccaacgcc tacggcctgagtgaccccagccccatcactgacaccgtcaaaacacaagatatccccccc accagtcagggagtggaccaccgtcagattcagagggagttaggagaggtggtcatccac cttcacaaccccaccatcctctcctcctcctctgtcagagtgcagtggacggtggagcag cagtctcagtacatccagggttataaggtgatgtaccgtgcctctccagagggccagcag aggagtgactgggctgtgtttgaggtgagaaccccaggggaggacagtactgtggtgccc cagctcaggaagggagtcacttacgagttcaaagttcgccccttcttcaacgagttccag ggaacagacagtgaggtcaagatagccaagactctggaggaagctcccagtgcagcccct cgtggggttaccgtcacagagagcggggacaatgggaccgccatcatggtctcctggcaa ccgcctccagaggaggagcagaacggggtggtccaggagtacaagatctggtgtttgggg aatgagagcaggtaccatatcaaccgcacggtggacggctctaccttctccttgctgatc cccagcctggctccagggatccgttacagtgtggaggtcgcagccagcactggggcaggc ccaggggtcaagtctgatgtcaccttcttccagatagattcatcaggacatgtgacggag ggtgtgttggagccagagaacaccctgtcccaacagatcagtgaggtggtgaagcagccg gccttcatagcagggataggagcggcatgttggatcatcctcatggtgttcagtatctgg ctctaccgacagcgtaagaagaggagtggcctcagcactaactacgcaggcatccgcaag gtgccatcttttaccttcactcctacagtggcataccagagaggtggagaggctgtcagc agtgctggaaggccaggtttgctgaacattggggagtctgctacccagccctggttggct gatacctggcccaactcctgctccaatcacaacgactgtagcatgaactgctgcactgca ggacagggcaacagtgacagcaacctggctacatacagccgcccagccgactgcatcgcc aactataacaaccagatggagagcaagcagaccaacctgatggtgcctgagggaggagtg tacggagacgtggacctctccaacaagatcaacgagatgaagaccttcaacagccccaac ctgaaggacggacgcttcgttgggccgggtggacagcccaccccgtacgccaccacacag ctcattcagtcttctatcctgggaaacaacatcaacacagacagaggggtaggaggggga gggggagggggagggggaggggagacaaacgagaaacacggctggaaacccaaccctgtt caggggcagaagcaacaggaaatgacctcacagctccaccaatataacatcatggagcag aacaagctgaacaaggaccactacagaggaggggacagtcccatggctaccaccatcccc tataaccaggcccacgaggcccacaccgtgggctcccacaacagctctgaccatggcagc tgcagcacctccgggagtcaaggtcaaaagaagggagtgcgcacccccaaactacccaaa cagagtgcaatgaactgggctgaccttctgcctcctccccctgctaacccacctccctgc cgcaacatggaggagtactccctgtctatgaacgagagttatgacccagatatgcagtgc tccctgcccccctcccgcatgtacctgcagccagacgaactggaggaggaggaggagatg gagaggggtcccactccacccgtcagaggtgctgcctcgtcccccgctgcggtgtcctat agccaccagtccacagccaccctcaccccctcgccccaggaggagctgcaacccatgctc caagacacaacagacagcatggtctctggacacgaacgcagacgccatgtagtgagcccc cctccccggcccctctccccctcacacacctacggctacatctccagccccatgtctctg gacacagatggcatggaggaggaggaggaggagatgttggaggaagaggaggaagaggag gaaggggacaagacagacgcggaggtggccaaggtgcaccaccaccacacccaccctcac caccctcaccacccccaccacccccagcagatgcacaccaggaggctgctgctgcggggc ctggagcagacgccagcctccagcgtgggggacctggagagctctatgacaggctccatg atcaacggctggggttcagcctccgaggaggacaacgcctcatcaggacgctccagtgcc gtcagctcctcagacggatccttcttcacagatgccgactttgcccaggccgtggcggct gctgcggagtatgcaggcctcaaggtagccaagtaccccaaccccacgcaaggccaggag ggaggccccggagcgcgaaagtaccaaatgaccccctcaggccaccgtccgggcagcccc ccttccacagacagtaacatgagcacggccaacatgcataagaggcctcctaagaagcag aagcagcaccctgcagcgagccacccagggctccagagacgagaggcctacgctgaagat ctgcctcctcctcccatcccccctccagcggggctcaagtcccccacacatccctccaag acagccctggaggcccgggggatgatgtctcccaaggcaggcgagggcagggacaggaga ggggactcaggaggagggtaccggccgcgggagggatcggacccccgtaccagctcctca gagcgccgggagacccaggacagacagaagatcccccgtgcagggaaagggaacaaacag gaggggggcagcaccaaggcacgccaacacccaggaccagaggacatcctgccctacagc cgcccctccttccccacggtccacagtcccagagacagggaccccagctcctccagctct atgtcctcccggggctcagggggccggcggagaggagagggggggccgggggctcgcagg atccccaacgacatgggggccttccagccaggagacgatgacttagagatggtggagacc tga

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