Oncorhynchus mykiss (rainbow trout): 110508002
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Entry
110508002 CDS
T07259
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25834
SLIT and NTRK-like protein 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514
Cell adhesion molecule (CAM) interaction
omy04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
110508002
04517 IgSF CAM signaling
110508002
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Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_9
Motif
Other DBs
NCBI-GeneID:
110508002
NCBI-ProteinID:
XP_021444115
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Position
27:38619550..38628170
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AA seq
901 aa
AA seq
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MLWVTLLSTIALGWTTPIPLLEDSEEIDEPCFEPCYCQVKEGVFHVHCDSKGFTNVSQIS
QIWTRPFKLNLQRNSMRKLYFNSFLHLNNAVSINLGNNALQDIHAGAFNGLGILKRLFLH
ENKLEVFRNDTFLGLESLEYLQADYNVIKRIESGAFRHLHKLRVLILNDNLIPVLPCYLF
RSVSLTHLDLRGNRLKTLPYKGTLEYVGRSLMEIQLEENPWICECDIVQLKTWLERVPYT
ALVGEITCEYPFHLHGKDLREIKRSELCPLLSDVEIEVKLGIPRSPFNNENTWPTKPSSM
LSSFHNTASSVEYKERHVKPTKRPRPTKNPPTPRSLYPGQNQPPIAGYQTRPPIPIVCPS
GCICNLHINDLGLTVNCKEKGFHNISELLPRPLNAKKLYLSGNLIQKIYRSDFWNFSSLD
LLHLGNNRISYVQEGAFINLPNLKSLYLNGNDIERLTPGMFRGLQTLSYLYFEYNVIREI
QPASFSLMPSLQLVFLNDNLLRTLPTDAFAGTSLARLNLRNNYFLSLPVRGVLEHLHSIV
QVDLHQNPWDCSCDIIPLKIWMEKLSTVIMVSDVICKTPDFAFGKDLRSLDAEIICPEMK
FSSGPSPALLPSDDMTTGSSGLGEAVGRGPVPLSVLILSLLVLFISAVFVAAGLFAFVLR
RRKKLPFRKRSEVDLTGIQMQCRIFEDPPRQTSSGSVGSPEKPPSGHTHTHSHTHGHVGH
THSHGHVYDYIPHPVTQMCNNPIYKPREGEIGEQFAETKENNSNYRTLLEKEREWTLAMS
NSQLNTIVTVNHNTGDKSGFHENGGLCPTVIDSQRPKPTVGFVDCLYGTVPKLKDMHVAH
AHPPGMQYPDLQQDARLKETLLFTAGKGCFPDPSQSDYLELRAKLQTKPDYLEVLEKSYR
F
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgggttaccttgctgagcaccatagccttaggatggaccaccccaatcccactg
ctggaggactcggaggagatcgacgagccctgcttcgagccctgctactgccaagtcaaa
gagggcgtatttcacgtccactgcgacagcaaaggatttacgaacgtcagtcagatctcc
cagatatggacacggcccttcaaactcaacctgcagaggaactccatgaggaagctgtac
ttcaacagttttcttcacctcaacaacgccgtatccattaatctggggaataatgcactt
caggacatccacgccggagcatttaacggattgggaattctgaaacggctgttcctgcat
gagaacaaactagaggttttccgtaatgacaccttcctgggtctggaaagcttggaatac
ctgcaggcagactataatgtcatcaagaggatagagagtggagcgttcaggcacctccac
aaactcagagtgctcattctaaatgacaatctgataccagtcctgccctgctacctattc
aggtcggtgtcactaacacacctggacctgaggggaaaccggttaaagacattaccatat
aagggcacgttggaatatgtggggcggagcctgatggagattcagctagaggagaatcca
tggatctgtgagtgtgatatagttcagctaaaaacatggttggaacgcgttccctacaca
gcactggtaggagagatcacctgcgagtaccccttccacttgcacgggaaagatttacga
gagatcaaacgcagtgagctctgtccgttactttcagacgtggaaatcgaggtcaaactg
ggaatcccccggtctccgtttaacaacgagaacacgtggccaacgaaaccttcctccatg
ctgtcttcgttccacaacacggcgtcgtctgtggagtacaaagagagacatgtcaaaccc
accaagcggcccaggcccaccaaaaaccctcccacccctcgtagtctctaccccggccag
aaccagccccccatagctggctaccagacccgcccccccatccccatcgtctgcccttct
ggatgtatctgcaacctccatatcaacgacctggggctaacggtcaactgtaaagagaag
ggctttcataatatctcagagctcctgcccaggcccctaaatgccaagaaactttacctg
agcgggaatctaatacagaaaatctaccggtctgatttctggaacttttccagtttggat
ttactacacttggggaataaccggatatcgtatgtccaggaaggggcgtttatcaacctt
cccaacctgaagagtttgtatctgaatgggaacgacattgagaggctaacccccggtatg
ttccggggcttacagacgttgagttatctttattttgagtataacgtgattcgtgagatc
cagccggcgtcattctctctcatgcccagccttcagcttgttttcctcaatgataacctc
ctccgcaccctccccaccgacgccttcgcaggtacaagcctggctcgactcaacctccgc
aataactacttcctgtccctgcccgtgcgtggtgttctagaacacctgcattccatcgtc
caggtggaccttcatcagaacccctgggactgctcctgtgacatcatccccctcaaaatc
tggatggagaagctgtctactgtcatcatggttagtgatgtcatctgtaagactcctgat
tttgcctttgggaaggatctgaggtcgctggatgctgagatcatctgtccagagatgaaa
ttctcatccggaccctccccagctctcctcccctctgatgacatgaccaccggtagctct
ggtctgggggaggctgtggggagggggccggtgcctctatcagtcctcatcctcagtctt
ctcgttctgttcatctcagcggttttcgtggccgcgggcctcttcgccttcgtcctgcgg
agaaggaagaagctgcccttccggaaacgctctgaggtggatctgacaggaatccagatg
cagtgcaggatatttgaggatccgccgagacagaccagcagtggaagcgtaggctcacca
gaaaagccacccagcggacacacacatacacattcacacactcatggtcacgttggccac
acacacagtcacggtcacgtctatgattacattcctcaccctgtgacgcagatgtgcaac
aaccccatttacaagccccgagagggggagataggggagcagtttgcagaaacaaaagag
aacaacagtaattaccgaaccctcttagagaaggagagagaatggaccctagccatgtct
aactcacagctcaacactatcgtcacggtaaaccacaatacaggggataaatcaggattt
cacgagaacggcggactgtgtcccaccgtgattgacagccagagacccaagccgactgtt
ggcttcgtagactgtctgtatggaacggtcccgaaactaaaggatatgcacgtcgcacac
gcacacccacccggtatgcaatacccggacttacaacaggacgcacgtctcaaggagacg
ttgctgttcacagcgggtaaaggctgcttccctgacccatcccaaagcgattatcttgag
ttaagagccaaactccaaacaaagccggattacctcgaagtactggagaaatcatatcgg
ttctaa
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