Oncorhynchus mykiss (rainbow trout): 110508055
Help
Entry
110508055 CDS
T07259
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110508055 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110508055 (dhx36)
03012 Translation factors [BR:
omy03012
]
110508055 (dhx36)
Enzymes [BR:
omy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110508055 (dhx36)
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110508055 (dhx36)
Translation factors [BR:
omy03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110508055 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
NB-ARC
ATPase
AAA_16
NPHP3_N
DUF7428
Motif
Other DBs
NCBI-GeneID:
110508055
NCBI-ProteinID:
XP_036820914
Ensembl:
ENSOMYG00000043064
LinkDB
All DBs
Position
27:41521446..41571922
Genome browser
AA seq
1078 aa
AA seq
DB search
MSYGGYGGRGGRRGGRRGGRGFGRDGSRERWDRLAGSSGGGHPRSTETESREDRGERGGR
GGGPNRPPPHLKGREIGLWYAKWGGLKRKENERKSRAVVQMDESREQHITNLLNTVQRGP
TCPAREAHPSTSEHWRSTPSAPVRGGHCYFDGDEPSQDVLKMDLKQEKKEVEERPVQNTP
LTSQRYFPQDVLKAEPQEEREEKERRGKDKDLEYLFQEVVRENALDQQLKRDLERKKADS
KYLDMLKFREKLPSFGKKEELVELIRSSQVLVVSGETGCGKTTQVTQFILDDYIERGMGS
VCRVVCTQPRRISAISVAERVAAERAESVGDGNSCGYQIRLQSRLPRKQGSVLYCTTGII
LQWLRSSPLLSTISHLVLDEIHERNLHSDVLLIIVKDLLRVRQDLKVILMSATLNAEKFS
KYFNNCPMIHIPGMTFPVQEFLMEDVLEMIRYRPQKKEQRPRWKRGFMQGQNSRPEKDQK
EAEYKESWPCYARTLRDKYSDRTIDVLEMMDDDDKIDLDLIVQLIRHIVLSQEEGAILVF
LPGWDNISGLNDLLMAQQMFKSDRFVIIPLHSLMPTVTQTSVFKRPPPGVRKIVIATNIA
ETSITIDDVVFVIDGGKIKETHFDTQNNISTMTAEWVSLANAKQRRGRAGRVCPGKCYHL
YNGLRASLLDAYQLPEIMRTPLEELCLQIKILKLGPIAEFLRKALDPPTEEAVTLAITHL
MDLNALDRSEALTPLGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIP
MGKEKMADFRRRTLSRESKSDHLTIIYAFTGWEEAKRRGYKFEREFCWDNFLSANTLQML
HNMKGQFAEHLLGAGFTSSKNPKDPESNTNSDNEKLIKAVIVAGLYPKVAMIKPSGSKKR
PVRVYTKTDGKVCIHPKSVNAEETQFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGG
DVTIQMDQDQETIAVDDWIVFQSPARIAHLVKNLKKELDSLLEEKIRSPAPVDWSNRQSK
DCAVITAIIDLITTQERPDVNARNTEPRGRRQYHNNDDGGDEYENCCISSQPREKLRP
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggaggttatgggggcagaggcggccgacgaggtggccgaagaggaggtcga
ggattcggacgggatgggagccgggagaggtgggaccgcctagctgggtcgagtggtggt
ggacacccgcggagcaccgaaacggagtcgagggaggaccggggagaacgaggagggaga
ggtgggggaccaaaccgtccacccccgcatctaaagggccgggagatcggactgtggtac
gccaaatggggaggcttgaagaggaaagaaaatgagagaaaatcgcgggcagtggttcag
atggatgagtccagggaacagcatatcactaatctgctgaacactgtccagagaggaccg
acatgcccagccagggaggcccacccctccacatctgagcactggcgttcaaccccgtca
gcaccggtcagaggcggccactgttactttgatggtgatgagccctctcaggatgtcctg
aaaatggatctcaaacaagagaagaaggaggttgaggagaggccagtacagaacactcca
ctcacatcacaacgttacttcccacaggatgtccttaaagctgaaccccaagaagagagg
gaggagaaggagaggagagggaaggataaagacctggagtatttgtttcaggaggtggtc
agggagaatgccctggaccagcagttaaagagagatctagagaggaagaaggcggactct
aaatacctagacatgctgaaattcagggaaaagcttccatcctttggaaaaaaagaggag
ttggtggagttgatcaggtccagccaggtgctggtggtcagtggagagacggggtgtggt
aagaccacccaggtgacccagtttatcctggatgactacatagagaggggcatgggttca
gtctgcagggtggtctgcacccagccacgtcgcatcagtgccatatctgtagcagagcgg
gtggctgcggagagggctgagagtgtaggggacgggaactcatgtggttatcagatccgc
ctgcagagtcggttaccacggaaacagggctcggtgctgtattgtacaacgggtattatt
ctacagtggcttcgctcttcccctctgttgtccaccatcagccacctggttttggatgaa
attcacgagaggaaccttcactctgatgttctactcatcattgttaaagacctgctccga
gtccgacaggacctcaaggtcatcctcatgagtgccacgctcaacgctgagaagttctcc
aaatactttaataactgtcctatgatccacatcccggggatgaccttcccggtacaagag
ttcctaatggaggatgtgttggagatgattaggtaccgtccccagaagaaggagcagagg
cccaggtggaagagaggtttcatgcagggtcagaattccagaccagagaaggaccagaaa
gaggccgagtacaaggagagctggccctgctacgcccgcacactacgagacaagtactct
gacagaaccatagatgtgttggagatgatggacgatgatgataagattgaccttgatctc
atcgtgcagctgatcagacatatcgtgctaagccaggaagaaggagccatcttggtgttc
ctgccaggttgggacaacatcagtggcctcaacgacctcctcatggctcagcagatgttc
aaatcagatcggtttgtgatcattcctctgcactccctgatgcctactgtcacccagacc
tcggtgttcaaaaggcctcctccaggagtcaggaagattgtcattgccaccaatatcgct
gagaccagtattaccatagatgatgtggtgtttgtgatagatgggggaaagattaaggag
actcactttgacactcagaacaacatcagcactatgactgcagagtgggtcagcctggcc
aatgccaaacagagaagaggacgcgctggcagggtgtgtccagggaagtgttatcacctg
tataatggcctgagggccagtcttctggatgcctaccagctacctgagatcatgcgcaca
ccactggaggaactgtgtctgcagatcaagatcctcaagctgggtccaatagcagagttc
ctgaggaaagctctggaccctcccacagaggaggctgtcactctggccatcacacacctg
atggacctcaatgctctggaccgctcagaggctctgaccccgttagggttccacctggcc
aggctgcctgtagagcctcacatcgggaagctgatcctgtttggagctctgctgggctgt
ctggaccctgtcctcactatcgctgcctctctcagcttcaaggaccccttcttcatacca
atgggtaaggagaagatggcagactttaggagaagaactctgtccagagaatcaaagagt
gaccacctcaccatcatctatgccttcacaggctgggaggaagctaagcgacgcggctac
aagtttgaacgagagttctgctgggacaacttcctgtcagccaatacactccagatgctg
cacaacatgaagggtcagtttgctgagcacctgctgggggctggcttcaccagcagcaag
aacccaaaagaccctgaatctaacacaaactcagataatgagaagctgatcaaggcagtg
atagtggcaggtctctaccccaaagtggccatgatcaaacccagtggcagcaagaagaga
ccggtgagggtgtataccaaaaccgatgggaaggtgtgtattcaccccaagtcagtgaat
gctgaggagacccagtttaactacacatggctcatctatcacctcaagatgaggaccagc
agtatcttcctgtacgactgtacggaggtgtctccgttctccctgctgttctttggaggt
gacgtcaccatacagatggatcaggaccaggagaccatcgctgtggacgactggatcgtg
ttccagtcccccgcacgcatcgctcacctcgtcaagaatctgaagaaggagctggactct
ctattggaagagaagatccgaagccccgcccctgtggactggagcaaccgccaatccaaa
gactgtgccgtcatcacagccatcatagacctcatcaccacccaggagagacccgacgtt
aacgcgaggaacactgagcctagaggacgccgccagtatcacaacaacgatgatggtggt
gacgagtacgagaactgctgcatctcttctcaacccagagaaaagctcaggccatag
DBGET
integrated database retrieval system
