Oncorhynchus mykiss (rainbow trout): 110508188
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Entry
110508188 CDS
T07259
Name
(RefSeq) double-stranded RNA-specific editase B2-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110508188
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110508188
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
DSRM_2
Motif
Other DBs
NCBI-GeneID:
110508188
NCBI-ProteinID:
XP_036823016
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All DBs
Position
28:complement(24145942..24159318)
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AA seq
800 aa
AA seq
DB search
MRFFLLSGTSSVEVKENRDSRNQVDYSTILQPGHHTSSALCTDISKRKTTVDCTLVPTHH
TPALNTDISRGLSRTTALQRKQPLVEGKDRLLYELQLIWKTMMTSWSGTKKNALVHLNEL
RPGLQYEIVSQTGPVHAPVFAVGVEVNGLRFEGRGPTKKKAKMRAAELALRSFIQFPNAH
QAHITMGNLNFINTTAPADFTSDQADLVPDTLFKEFQPEAQEDQILNHRTGGKELQFEEP
PAQGQLYRAAKKGQELLSSICNHGRLVRLTLDLMSSANQKRQRIGSSIVGELRPVALLNE
LMPGLRYVCLTERKKGRPIRSFVMAVRVDGRVFEGCGRSKRLAKASAAASALQDLFNISL
GPERSIRNTASWAKSAQLPQCFAEYIFHLVREKHSELADCCCTPSQSHRRHKVLAGIVMT
RGFDLRRAQVVSLGTGTKCISGECVSDQGWAVNDCHAEVTTRRAFLRFLYAQLELFLCNR
PGSLEQSIFVRDKESVYRLRDGILFHMYVSSSPCGDARLNCPYEITATHQSGYRFVRKLR
CHLRMKMEGGEGTLPVSVLRANQKWDRRLPREAPVTMSCTDKIARWNILGLQGSLLSHLV
EPVYLHSLTVGSLCHTGHLGRTMARRMGHIAPLPSSYRRNRLLLGCLSSSEGRQPGKSPS
FSVNWSAGDGELEVVDVSTGRKDSGTPSRLCKRSFFTRWERLHHQLSSPGGVLDAEEAHF
LMSNSTKTLSARSVEGRVSPRSDATCRKKMEEAMKTYCGAKMAAGAYQRARQKFVVSLQE
AGLGIWNRKPPEQEHFQSRV
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgcgattcttccttctatctggtaccagcagtgttgaggtgaaggagaaccgcgacagc
agaaaccaagtggactattccaccatactacaacctggacatcatacatcatcagctctt
tgcactgacatctccaaaagaaagacgacagtggactgtaccctggtacctacacatcat
acaccagctcttaacactgacatctccagagggctctccaggaccactgctctacagagg
aagcagccattggtggaaggaaaagacaggcttctctacgaactccagttgatttggaag
acaatgatgacttcctggtctggcacaaagaagaatgccctggtgcatttgaatgagctg
agaccaggtctacagtatgagatagtgtctcagacagggccagttcacgcccctgtgttt
gctgtaggagtagaggtcaacggactcaggttcgagggccgaggccccaccaagaagaag
gctaagatgagggcagcagagctggctcttaggtccttcatccagttccccaacgcccat
caggctcacatcaccatgggaaacctcaacttcatcaacaccacagcaccagcagacttc
acctcagatcaggctgatctcgtccccgacacgctcttcaaggagtttcagccagaagca
caggaagaccaaatccttaatcacagaacagggggaaaggagttgcagtttgaggaacca
ccagcacaaggacaactctacagagcagcgaaaaaaggacaggagttgctctccagtatc
tgtaaccatgggagattagtgcgcctgacccttgacctgatgtcctcagccaatcagaag
aggcagaggatcggttcctctatcgttggggaactgaggcccgtggctctgctcaatgag
ttaatgccaggcttgaggtacgtctgcctgacagagagaaagaaaggcaggccgatcagg
agctttgtgatggcagtacgggtggatggaagggtatttgagggctgtgggcgcagtaag
aggctggctaaagcttcagcagcagcctcagccctacaggacttgtttaacatcagtctg
ggtcctgagaggagcatcagaaatactgccagctgggccaagagcgcacagctacctcag
tgctttgcagagtatatcttccacttggtgagagagaaacacagtgagctggctgactgt
tgctgcactccctcccagtcgcacaggcgtcacaaagtactggcaggcatcgtaatgacc
agaggttttgatctgaggcgtgcccaggtggtgtctttggggacagggaccaagtgtatc
agtggagagtgtgtcagtgaccagggatgggcggttaatgactgccatgctgaggtcacc
accaggagggctttcctccgcttcctctatgcccaactggagcttttcctctgcaaccgg
ccaggcagtttggagcagtcgatttttgtgcgagacaaagagtcagtatacagactgaga
gacggtattctgttccatatgtatgtgagttcatcgccctgtggggacgcacgcctcaac
tgtccctacgagatcacagctacacaccagagcgggtatagatttgtgaggaagttgcgc
tgccatctgaggatgaagatggaaggtggtgagggtacacttcctgtcagcgtactgaga
gccaatcagaaatgggacaggaggttgccgagggaagctcccgtaaccatgtcctgcaca
gataaaattgccaggtggaatattctaggtctccagggctctctcctatctcacctggtg
gagccggtgtacctccacagcctcacagtgggcagcctgtgccacacgggtcacctggga
aggaccatggcacgacgcatgggccacatcgcccctctgccctcgtcctatagacgcaac
aggctactgctcggctgcctcagcagcagtgagggtcggcagccagggaagtcccccagc
ttcagtgtgaactggagtgctggagatggagagctggaggtggtggatgtctccacaggc
aggaaagactcagggacaccatccagactctgcaagagatccttcttcactcgctgggag
agactacaccaccagcttagcagtccaggaggagtattggatgcagaggaggcccatttt
cttatgtcaaatagcacaaagactctgtctgcacggtcggttgagggaagagtatcgcct
aggagtgacgccacctgtcggaagaaaatggaggaggccatgaagacgtactgtggagct
aagatggcagcaggggcctaccagagagccaggcagaagtttgtcgtctcgctgcaggag
gcaggtctgggcatctggaacaggaaaccaccagaacaggagcatttccagagcagggtg
tga
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