Oncorhynchus mykiss (rainbow trout): 110508277
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Entry
110508277 CDS
T07259
Name
(RefSeq) claudin-12
KO
K06087
claudin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03272
Virion - Hepatitis viruses
omy04382
Cornified envelope formation
omy04514
Cell adhesion molecule (CAM) interaction
omy04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
110508277
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
110508277
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110508277
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110508277
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
110508277
04147 Exosome [BR:
omy04147
]
110508277
Cilium and associated proteins [BR:
omy03037
]
Other cilia and associated proteins
Stereociliary proteins
110508277
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
110508277
Exosomal proteins of colorectal cancer cells
110508277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Clc-like
Motif
Other DBs
NCBI-GeneID:
110508277
NCBI-ProteinID:
XP_021444378
Ensembl:
ENSOMYG00000031875
UniProt:
A0A8C7SIR8
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All DBs
Position
3:complement(6901478..6905286)
Genome browser
AA seq
335 aa
AA seq
DB search
MSCRDIHATNAFSFIIAFISVGGIAVAALIPQWRVTRLVTFNKNAKNISVYDGLWAKCVK
QDGYSGCYYYDSEWYSKVDQLDLRLLQFCLPTGLLFGSLALVLCMAGMSKTCCCSDKAET
DIKSTRCLVNSAGCHLVAGMFLFLGGAIALAPSVWFLFRTKEMNIKYDRIFSDGFAVYVA
IGCSGGLMLAALLMFMWYCMCKKLPSPFWLPLPTLPNSLSTQPLTANGYPPSPVYGPPQT
FPPQGYVPTVMGAQPYAPSQGYPQSVAPLAQQPQQVCMSQMSAPDGYGSAYSYAPSQSYA
PSQVGYAPSYVGHRYSTRSRMSGIEIDIPVLTQDL
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgccgggacatccacgccaccaatgccttctccttcatcatcgccttcatctcc
gtgggcggtatcgctgtggcggcgctgatcccacagtggcgagtgacacggcttgtcacc
ttcaacaaaaacgccaagaacatcagcgtctatgatggcctgtgggccaagtgtgtgaaa
caagatggctactctggctgctactactacgactcagagtggtattctaaagtggaccag
ttggacctgagactgctccagttctgcctgccgactgggctactgtttggctccctggcc
ctggtgctgtgtatggcaggcatgtctaagacctgctgctgctctgataaggctgagaca
gacatcaagagtacccgctgtctggtcaacagcgcaggctgccacctagtggccgggatg
ttcctgttcctgggcggtgctatcgccctggcgccttccgtgtggttcctcttccggacc
aaagagatgaacatcaagtacgaccgcatcttctcagacgggttcgcggtctacgtggcc
atcggctgttccggtggcctcatgctcgccgccctgctgatgttcatgtggtactgcatg
tgtaagaagctaccctctcccttctggctgcctctccccacactccctaactccctctcc
acccagcccctcacagccaacgggtaccccccctcccctgtctacggaccccctcagacc
ttccctccacaggggtacgtccccactgtgatgggtgcccagccctacgctccctcccag
ggctaccctcagagcgtagctccactggcccagcagcctcagcaggtctgtatgtcccag
atgtcagccccggatgggtatgggtcagcttacagctatgccccgtcccagagttatgcc
ccctctcaggtgggctacgcccccagctacgtaggccaccgctactccacacgctcacgc
atgtctggcatagagatagacatccctgttctaacacaagacctctga
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integrated database retrieval system