Oncorhynchus mykiss (rainbow trout): 110508313
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Entry
110508313 CDS
T07259
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03018
RNA degradation
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110508313
09123 Folding, sorting and degradation
03018 RNA degradation
110508313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110508313
03041 Spliceosome [BR:
omy03041
]
110508313
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110508313
mRNA degradation factors
5'-3' decay
Lsm complex
110508313
Spliceosome [BR:
omy03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
110508313
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
GPAT_C
Motif
Other DBs
NCBI-GeneID:
110508313
NCBI-ProteinID:
XP_021444416
Ensembl:
ENSOMYG00000040895
LinkDB
All DBs
Position
28:947539..954334
Genome browser
AA seq
111 aa
AA seq
DB search
MADRNQDRNKEGEKKKKESIFDLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTI
EYLRDPDDQFKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagaaaccaggacagaaacaaggaaggagagaagaagaagaaagagagtatc
tttgacctgtcaaagtacattgataaacaaatccgtgtgaagtttcagggaggacgagag
gccagtggagtcctgaaggggtttgaccccctgttgaacctggtattggacagcaccatc
gagtacttgcgggatcctgacgaccagttcaagttgactgaggacacgcggcagctgggc
ctggtggtttgtagagggacgtccgtggtgctcatctgtcctcaggacggcatggaagcc
atccccaaccccttcatccagcagcaggacggatag
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