KEGG   Oncorhynchus mykiss (rainbow trout): 110508338
Entry
110508338         CDS       T07259                                 
Name
(RefSeq) cullin-3
  KO
K03869  cullin 3
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04120  Ubiquitin mediated proteolysis
omy04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110508338
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    110508338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:omy04121]
    110508338
   03400 DNA repair and recombination proteins [BR:omy03400]
    110508338
Ubiquitin system [BR:omy04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     110508338
DNA repair and recombination proteins [BR:omy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     110508338
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8 DUF6655 Stu2_CTS
Other DBs
NCBI-GeneID: 110508338
NCBI-ProteinID: XP_021444463
Ensembl: ENSOMYG00000045966
UniProt: A0A8C7V1X3
LinkDB
Position
28:complement(2483313..2498771)
AA seq 766 aa
MSNLKGGVKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNAY
TMVLHKHGEKLYTGLREVVTEHLVNKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDI
LMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGA
IRNACQMLMILGLEGRTVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARIN
EEIERVLHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLGCMYKL
FSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKTRFDRFLLESFNN
DRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFM
QEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNT
TMDEFRQHLQSTGVSLGGVDLTVRVLTTGYWPTQSATPKCTIPPSPRHAFEVFRRFYLAK
HSGRQLTLQHHMGSADLNATFHGLIKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTIL
MLFNNREKSTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHVFTVN
DQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVL
VAEVTQQLRARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgtccaacctcaaaggcggcgtcaagaaagacaccaagatgaggataagagcctttcct
atgacaatggatgagaagtatgtcaacaacatctgggaccttctgaagaacgccatccag
gagatccagaggaagaacaacagcgggctgagcttcgaggagctctacaggaacgcctac
acaatggtgctgcacaaacacggcgagaagctctacacaggcctgcgtgaggtcgtcacc
gagcacctcgtcaacaaagtaagagaagatgtcctcaactcattaaacaataacttcctg
cagacattaaatcaagcttggaatgatcaccagacggcaatggtcatgatccgagacatc
ctcatgtacatggaccgggtgtacgtgcagcagaacaacgtggagaatgtgtacaacctg
ggcctgatcatcttcagagaccaggtggtgcgctacggctgcatccgagaccacctccgc
cagacgctgctggacatgatcgcacgcgagaggaagggagaggtggtggataggggagcg
atcaggaacgcctgtcagatgctgatgattctcggcctggagggcaggactgtgtacgag
gaagactttgaggcccccttcttagaaatgtctgcagaattcttccagatggagagccag
aagttcctagcggagaacagtgccagtgtgtacatcaagaaggtggaggccaggatcaac
gaggagatagagcgggtgctgcactgcctggacaagtccacagaggagcccattgtcaag
gtggtggaacgggagctcatctccaaacacatgaagaccatcgtggagatggagaactct
ggccttgtccacatgctcaagaacggcaagaccgaagacctgggctgcatgtacaagctg
tttagccgtgtgcctaacggcctgaagacaatgtgtgagtgtatgagctcctacctgagg
gagcagggcaaggctctggtgtcggaggagggagagggcaagaaccctgtcgactacatc
cagggcctgttggacctgaagacgcggttcgaccgcttcctcctggagtcgttcaacaac
gaccggctcttcaagcagaccatcgccggagactttgagtacttcctcaacctaaactcc
cgctcccccgaatacctctccctcttcatcgacgacaagctcaagaagggagtcaaaggg
ctgacagagcaggaagtggagtccatcctggacaaggccatggtgcttttccggttcatg
caggagaaggatgtgtttgagaggtactacaaacagcacctggcccggaggctgctcacc
aacaagagtgtctctgacgactctgagaagaacatgatctctaagctgaagactgagtgt
ggctgtcagttcacctctaaactggaagggatgttcagagacatgagcatctccaacacc
accatggacgagttcagacaacacctacagtccacgggggtgtctctagggggcgtcgac
ctcacagtaagagtactcaccactggctattggcccacgcagtcggccacgcccaagtgc
accatccccccctcccccagacatgcctttgaggtctttagaaggttctacttggccaaa
cacagcggcagacagttgacactccagcaccacatgggctcagcagacctcaatgccacc
tttcacggtctcatcaagaaggaggatggttcggaggtaggagtgggaggagcacaggtg
acaggctcgaacaccaggaaacacatactgcaggtctcaactttccagatgaccatcctc
atgctcttcaacaacagagaaaagtccacctttgaggagatccagcaggagacggacatc
ccggagagggagctggtgcgagcgctgcagtcgctggcttgtgggaagcccacccagcgc
gtcctcaccaaggagcccaagtccaaggagatcgagaacggccacgtgtttacagtcaac
gatcagtttacctccaagctgcacagagtcaaaatacagacagtcgctgctaagcagggg
gagtctgaccctgagagaaaagagacgcggcagaaggtagatgacgacaggaagcacgaa
attgaagcagccatcgtccgcatcatgaagtccaggaagaagatgcagcataacgtcctg
gtagcagaggtaacccagcagctgcgggcccggttcctccccagccccgtggtcattaag
aagcgcattgaaggacttatagagagagaatacttggcacggacgcccgaggaccgcaaa
gtctacacctatgttgcataa

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