Oncorhynchus mykiss (rainbow trout): 110508432
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Entry
110508432 CDS
T07259
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110508432
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omy03310
]
110508432
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
110508432
Nuclear receptors [BR:
omy03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
110508432
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
110508432
NCBI-ProteinID:
XP_021444624
Ensembl:
ENSOMYG00000027604
UniProt:
A0A8C7S102
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All DBs
Position
28:complement(7688645..7705872)
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AA seq
503 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTSRN
RCQHCRLQKCLVLGMSRDAVKFGRMSKKQRDSLYAEVQKHQKNQECLNQGLSLSREDVAG
GESKGDRHGELSRSYSSGGSSSTLSDLDDIAALPKLFDLPLTPQEAHEYCSLELQEDHGG
STGNTSNSSSPSSSSPISSNQNSPQQNLLDVTDANGIKHEYQMLSHTHVLLAHTHATLLE
TLPDDCTLMDIERITQSVVKSHLETSQYSSDELKRLTYNRMQYSPEETRNFQCESAESVW
QQCAHHITNSIQYVVEFAKRITGFMDLCQNDQIILLKAGCLEVLLIRMCRAFNATTNTIF
FNGKFASAQLFKALGCDDLVSAVFDLAKGLSRLQLTDEEMALFSAACLLSPDRPWLADSQ
KVQKLQAKVYLALQHSLHMSGAADEKLDQMVSKLPIMKSICNLHIDKLEFFRLVHPETAY
SFPPLYREVFGSEISLPDSTNNS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaagtaataccctgcaagatctgtggggacaagtcctcaggaatc
cactatggagttattacctgtgaaggctgcaaggggttcttccgccgcagccagcagaac
aatgccatgtactcgtgttcccgccagaggaactgtcttattgaccgaaccagccgcaac
cgctgccaacactgcagactgcagaagtgtctggtgttaggcatgagccgggacgcggtg
aagtttggccgtatgtctaagaagcagcgcgacagcctgtacgctgaggtccagaagcac
cagaagaaccaggagtgtctgaaccagggtctgtcactgtccagggaagacgttgctggg
ggagaaagcaagggggacaggcacggggagctcagtcgctcctacagcagcgggggctcc
agctccaccctgagtgacctggatgacatcgcagcgctccccaaactgtttgacctcccc
ttgaccccacaggaggcccacgagtactgcagcctggagctgcaagaagaccacggcgga
agcactgggaacacctccaattcttcatcaccatcatcatcctcgcccatttcgtccaat
cagaattctccccagcaaaatctactggatgtcactgacgccaatgggatcaaacacgag
taccagatgttgtcgcacacacacgtgctcctggcacacacacacgccacactgctagag
acactgcctgatgactgcactcttatggatatagagcgtatcacccagagtgtggtcaag
tcccacttggagacgagtcagtacagctctgacgaactgaagaggctgacatacaatcgg
atgcagtactcacctgaggagactcgcaacttccagtgcgagtctgcagagtctgtgtgg
cagcaatgtgcccaccacatcaccaattccatccagtacgtggtggagtttgccaaacgc
attacaggcttcatggacctgtgtcagaatgaccagatcattctgctcaaagcaggctgt
ctggaggtgctgttgattaggatgtgcagggcatttaacgccaccaccaacaccatattc
tttaatggcaaatttgcctctgctcagctcttcaaagccctcggttgcgatgacctggtc
agtgccgtgtttgacctggcaaaagggctctcccgcctgcagctgaccgatgaggagatg
gctctgttcagtgccgcttgcttgctgtccccagaccgaccatggttagccgacagccag
aaggtccagaagctacaggcgaaggtctacctggctctgcaacacagtctgcacatgagc
ggggctgccgacgagaagctagaccagatggtatccaagctgccgataatgaagtccatc
tgtaatctccacatcgacaagctggagttctttcgtctggtccaccccgagactgcatac
agcttcccaccactctaccgggaagtgttcgggagtgagatttctctccccgactctaca
aacaactcctag
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