Oncorhynchus mykiss (rainbow trout): 110508471
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Entry
110508471 CDS
T07259
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3 isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110508471
Membrane trafficking [BR:
omy04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
110508471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Myosin_TH1
DUF2982
Motif
Other DBs
NCBI-GeneID:
110508471
NCBI-ProteinID:
XP_036822105
LinkDB
All DBs
Position
28:complement(9629144..9675219)
Genome browser
AA seq
1457 aa
AA seq
DB search
MASKETTAAGFVHVGRENTESIRRLIDKQSIKFVRAVKQDTKHGKSEDRILVLATWRMYL
FAVKVPAKVEVTFNFLEIRAMNTYPDHQVVIDTDKSTHSLRLQSQDHLDHMMNHINFALS
RIFNNSMYAPTICRAEGDVSDGVLQFSPDSESSVETQRTCGGFSETYAALCDYNGIGCKE
EVQWDVDTIYHSQDNREFNLLDFSHLDSRDLAVMVASMAYNTWFTKLYCTDMRIGSEVVE
QVLHTISKSSSLEELTLENVGLKSDFPQKMATALSENPASAIHSLNLAHNTLDNQGVSNL
IQLVCRLNKGLRLLNLSKTSLSSKGVMSLSQALCSSDDYSNSLLHLDLSKNPGILSGEDA
TNMYLFLAQPNCLVHLDLSGTDCTVDSLFGALLRGCCVDLAYLNLSKNCFSHRKVRETLP
VVRQFFSSAFSLTHVNLSSMKLPPDTLRALFLGLSSNPHISDLHLDLSCCELRSAGAGVL
QELFPRVACIGSLDISDNGLDADLLGVIPAFSRHPSLKHLLLGKNFNLKGRVLDEILQKL
VQLVQEEECALQSLSLADSRLRSRGTVLVNALGSNTCLRKVDLSGNSLEDAGAKMLSKAL
QINTTLRSVTWDRNNTTATGFQDVARALEHNFTLHYMSIPLNDVTQAYRSAPERIDQALT
KIQRALLRNNQTQRFSQKQALRLHQGLVTSTAEQVMERLCVRVQQQVCALRGSEEGEELQ
AARQVLKEARNSRALYPSLCELAHVLSVDGPVRQKLDSLAGELAKAADKELQVIVDSMVS
LCRELCPMSSSSAERLNPPLSSVSERVSIPRSTIRTALMERAAQDINRALEDVKLSVVSY
LTNSIVDQILQELYTTHKTLLCQVSQAKRLDDAGTGRRIIRQSRITDSLDFPDEEGLGMN
IDTIAIKKRSSRTRRIRPVSTRLSLGDDPTSSPTHSGPLSRSASWEDLYTLPTQGAPLRH
VTQVRPRPPRRHCRGQVPVETHCSENGGVNVLEDGLPDFYTKRVLPDSQLSLLHQAQSLR
RKKRRSVLSIFSGFRKNRSSTISNQETDSGSENVYSMIQHPKDRGKGEAIIEVGANGRMM
PSPRPIQGTPLPGMRGGRPSPHCLTQRQPSDLVGVVYNCIGAEDEDSDSSFEIRPVGRDT
VRQKDTPIASDTQTESRANGHAMSSASLTDKQADIQTDRQSDRQTDRQTEPVCQDLPMPS
TQTEVERRTKETEGTESMEDRKEAAPCGQKPEPPSQSSKPSLASIKQRHLQGSSEKSTDG
IGWTEGDKVEEENNERRREGVQKERGAEGQRPPIPEKPGRDKTSPKTLPPVTPPEETTNE
KKTTPPVPPASAKPSFDLSQAPVSQDEGTNEKKSLPPVPPASTKPVFDSPDHAGCQDEEG
GRNGYPLKPHRNRKADSCDMGMCEGMERISPNDLETGSSDRKPPVKRPRLPENRNRSLDF
PSPESPEPANDNGVTSS
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaaagagaccaccgctgcaggtttcgttcacgtcggcagagaaaacacagag
agcatcaggaggctcattgataaacaatctatcaagtttgtgcgagctgtaaagcaggac
accaagcacggcaaatcagaggacaggatactggttctggcaacatggcgaatgtatcta
tttgctgtcaaagtccccgccaaggtggaggttactttcaacttcctggaaattcgagca
atgaacacttatccagatcatcaggttgttatagacacagacaaatcgacccactccttg
agactgcagtcacaagaccaccttgatcacatgatgaaccatatcaactttgccctctca
cgaatattcaataactccatgtatgctccgaccatctgccgagcagagggggacgtctct
gatggagtcctccagttttcaccggactccgaatcatctgtagagactcagagaacctgt
ggcggtttctctgagacctacgcagctctgtgcgactataacggcatcggctgtaaggag
gaagtgcagtgggatgtggacactatctatcactctcaggacaacagggagttcaacctg
ctggacttcagccacctggacagcagggacctggcggtgatggtggcttccatggcgtac
aacacttggttcaccaagctctactgcacagacatgcgcattgggtcagaggtggtggag
caggtccttcacaccatcagtaagtccagcagtctggaggaactcactctggagaacgtt
ggcctcaaatcagacttccctcagaaaatggcgacggctctgtcagagaatcctgcctct
gcaatccactctctcaacctggcccacaacaccttggacaaccaaggagtgtccaacctc
atccagctggtgtgtcgtctcaacaaaggccttcgtctgctcaacctctccaagacgtcc
ctctcctccaagggagtgatgtctctctcccaggccctctgctccagtgatgactactcc
aactctctccttcacctggacctgagcaaaaaccctgggattctgtctggggaggacgcc
acgaacatgtacctgttcctagcccagccaaactgtctggttcatttggacctctctggg
accgactgcactgtggactcgttattcggcgctctgttgaggggatgttgtgttgatctc
gcttacctgaatctctccaagaactgcttttctcacaggaaagtgagggagactcttcct
gtcgtcagacagttcttcagttcagccttcagtcttacgcacgtcaacctgtcttccatg
aagctccctccggacactctgagagctctcttccttggcctgtcttccaaccctcacatc
agtgacctacacctggacctcagctgctgtgagttgaggtctgctggtgccggggtgctc
caggagctgtttcccagagtggcctgtattggtagtctggacatctcagacaacgggtta
gatgctgatctgctaggggtcatcccggccttctccagacacccttccctcaaacacttg
ctgctgggcaagaacttcaacctcaagggcagggtgctggatgaaattctgcagaaacta
gtgcagttagtgcaggaggaagagtgtgccctgcagtccctctctctggcggactcgcgc
ctgcgctctcggggcacagtgctggtgaacgctctgggcagcaacacctgcctgcgcaag
gtggacctgagtgggaacagcctggaggatgcgggggctaagatgctcagcaaagccctg
cagatcaacaccacactcaggagtgtgacgtgggatcgcaataacaccacggctacagga
ttccaagatgtggctcgggccctggaacataacttcaccctgcattacatgtccatcccc
ctcaatgatgtcacacaggcttaccggagtgcccctgagaggattgaccaagcgctgacc
aagattcagcgtgctctgttgaggaacaaccagacccagaggttctctcagaaacaggct
cttcgtctgcaccaaggcctggtcaccagcactgctgaacaggtgatggagcggctgtgt
gtgcgtgtgcagcagcaggtgtgtgctctccgaggctcagaggaaggagaggagttgcag
gctgccagacaggtcctgaaggaggccagaaactcccgtgcactctacccatctctgtgt
gagctggcccatgttctctcagtggacgggcctgtcagacagaaactggactctctagca
ggagagctggccaaggctgctgataaggaactacaggtgatagtggactccatggtgtct
ctgtgtcgggagctgtgtcccatgtcctcctcctcagctgagcgactcaaccctccgctc
tcctctgtctcagaacgtgtctccatccctcgctccaccatccgcaccgccctgatggag
agagcggcacaggacatcaacagagccctggaggacgtaaagctgtcggtggtctcctat
ctgaccaactccatagtggatcagatccttcaggagctctacaccactcacaaaaccctg
ctgtgtcaggtgtcccaggcgaagcgtttggatgacgcagggacaggcaggcgcatcatc
agacaatccagaatcacagactcactggacttccccgacgaggaaggcctgggcatgaac
atcgacaccatcgccatcaagaaacgtagctccagaaccagaaggattcgtccggtgtca
accagattgagtcttggtgatgatcccacctcctccccgactcactctggccccctatcc
cgctcagcatcatgggaggatctgtacaccctgcctacccagggtgcaccactgcgccat
gtgacacaggtcaggccacggcccccgcgaaggcactgtcgaggacaagtccccgtggaa
acacactgttcagagaacggaggagtcaacgtgctggaggatggactgccggatttctat
accaagagagtcctgcctgacagtcagctgtcactactccatcaagctcagtccctgagg
aggaagaagagacgcagtgtgctgtcgatcttctccgggttccgcaagaaccgcagctcc
accatctccaatcaggaaacagatagtggctcagagaacgtgtactctatgattcagcac
cctaaggatcgtgggaagggggaggccatcattgaggtgggagccaatgggagaatgatg
ccgtcccctaggcccatccagggcacaccactgcctgggatgagggggggcaggcctagc
ccccactgcctcacacagagacagccttcagatctggtcggggtggtatacaattgtatc
ggagcagaagacgaggactcagacagtagctttgagatcagaccagtgggcagagacaca
gtcagacagaaggacacgccgattgcatcagacacccagacagagtcccgtgccaatgga
catgcaatgtcctccgcttctctgacagacaaacaggctgacatacagactgacagacag
agtgacagacagactgacagacagacagagccagtctgtcaggacctgccgatgcccagc
actcagacagaggtggagagacggacaaaggagacagaggggacggagtcaatggaggac
aggaaggaggctgccccctgtggacagaaaccagaacccccttctcaaagcagcaagccc
agcctggccagcattaaacagagacacctgcagggaagctccgagaaatcaactgatggt
ataggatggacagagggagacaaggtagaagaggagaataatgaaaggagacgtgagggt
gtgcagaaagaaagaggggcagaggggcagcggccccccattcctgaaaagcctggtaga
gataagacctctccaaagacactgcctcctgtcactccgcctgaggaaaccaccaatgag
aagaaaaccacacctcctgttccacctgcctctgccaagccctcttttgatttgtctcaa
gctcctgtcagtcaagacgaagggactaatgagaagaaaagccttcctcctgtgcctcct
gcttctaccaagcctgtgtttgactctcctgatcatgctggttgtcaagatgaggaggga
ggaagaaatggttatccactgaagccgcatcgcaacaggaaggcagactcatgtgacatg
ggtatgtgtgagggcatggaacggattagccccaacgatctggagacggggtcctcagat
cgcaaaccccctgtgaaaagacccagactcccagagaacagaaacagatctctggacttc
cccagtcctgagagtccagagcccgccaacgacaatggtgtgacgtcgtcataa
DBGET
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