Oncorhynchus mykiss (rainbow trout): 110508488
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Entry
110508488 CDS
T07259
Symbol
chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
110508488 (chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110508488 (chd8)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110508488 (chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
HDA2-3
RcpB
Chromo_MIT1
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
110508488
NCBI-ProteinID:
XP_021444702
Ensembl:
ENSOMYG00000042672
LinkDB
All DBs
Position
28:10252736..10281641
Genome browser
AA seq
2570 aa
AA seq
DB search
MADPIMDLFDDTPLFNLDALPGDAFTQGSSDPVEEALKLALGQIDPPYEPTPALCTPVAA
PIIPDPVPVQQQASVPFALPQTVSIASTVPQTTLSVASNTSRAATVLLGSPLTVNSSAGT
TQQITTQQFTTQQLTQIAQQLTPQQLAAITQQAGGQGGSKIVILKGPGGHAQVLQTVPGT
GSQAGKVTFARVLSGTQLRPGMQILSGGTVLNQASPGQGPVKVGTGIQRLVQSPNGPLKQ
VQLISMPQGQTQTVQMQIPQAQLAQSQQIQLQPQTQVQLQSTMQTQVTATATGTTSVRPQ
GVTLTTVPQQGEAKRITLVLQQPHGGTTQGGAVTVGGSGQLQQGQQQRLVLGNLPGKLVL
QGGQLAALTQARAGQTGAQPKVLTIQLQVQQQPNQQGGPKFQLVSGGQGSSPQVVQISQG
QGGQRLAMPLKLLLQPQMSSTSTAGGTVSVVKVINTSAAGSAPSTTTTMASTGIRLAKAQ
EPVRRVETLGKQEKANRIVAEAIARAKARGERNIPRVLNQDELPPGQKAADKGAAATTTG
TPGAKKKGGGGGSKKKSPPGAGGKGMACAEKKGKAKAAGGAAVGTPVGVAGTSGSKSKSK
AKINTITLVGGKKRKRNASSDHSDGDLSPASPSKALEEDMLAKRRSNRQVKRKKYTEDLD
IKITDDEDEPEEDVDVTTTAAVASITGGAAGQLMGEQLKQELQLDGDGLSSMQFFVENPN
EEDAAIVDKVLSMRLTKKEVSPGHYINAEEFFVKYKNYSYMHCEWATLEQLERDKRIHQK
LKRFKIKHAQMRLLLQEEEEPFNPDYVEVDRILDESNSVDKDNGEPVVYYLVKWCSLPYE
DATWELREDVDEDKVVEFRKIQDRQPQLKRTPRPQAAAWKKLEEFREYKSGNVLREYQLE
GVNWLLFNWYNRQNCILADEMGLGKTIQSISLLSEVLGAGVQGPFLVIAPLSTITNWERE
FATWTDMNAIVYHGSLASRQMIQQYEMYCKDDKDHLIPGAYKFEALITTFEMILSDCPEL
REISWRCVIIDEAHRLKNRNCKLLDSLKMLDLEHKVLLTGTPLQNTVEELFSLLHFLEPA
QFSSESEFLRDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQ
KKYYRAILERNFSFLSMGATSNSNVPNLLNTMMELRKCCNHPYLITGAEESIVAELREVY
DPMVPDFHLQALVRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLINKRYLY
ERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQND
LQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSMSGNKESNVNGQ
IQQFSKKEIEDLLRKGAYAAIMDEEDEGSKFCEEDIDQILQRRATTITIESEGKGSTFSK
ASFVATENRTDIALDDPEFWQKWAKRADIDFDSMNRKNTLVIDTPRVRKQTRQFATLRGE
GGEISDPDSDDEYPPANSRQSRSSRRSERHTGNGYGRTDCFRVEKHLLVYGWGRWRDILS
HARCKRRLGERDVETICRVILVFCLLHYRGDENIKSFIWELITPPENGREPHTLLNHSGL
SIPVPRGRKGKRVKAQSSFDVQKVEWIRKYNPDSLLLDDSYRKHLKHQCNKVLLRVRMLY
YLRQEVIGEHADSVLRGADARDIDIWMPEMEQQEVPSGWWDTEADRSLLVGVFKHGYEMY
TTMRADDCLCFLERAGRPDDQAIDAEQHSADAELGDGGDDDKYSEDPEFKPASRHTKDLY
EEADSMNMSDDICVDDKPGPVKTKGPPSGLSGACEWPTSSSLTARLRRLITAYQRSYKRE
QLKVEAAEKGDRKRRRCEQASKLKEIARQERQQRWTRREECDFYRVVSTFGVERIKEPNA
QEGEDAKLEWARFRTFARLDKKTDESLSRYFRCFMAMCRRVCNLRPARGEDPSDLGQSMA
PITEERASRTLYRISLLRRLRERVLPHPSMEESLLLAPLSSELPVWWSTPAHDRELMLGA
ALHGVSRTELSVFSDPQFSFSQARHDYLEMQQNQPAPASPLRQPQAEDGSAVKEEEGLNR
ESGLLGASEALGHSDTQTTPLSHPDGKERDRTGLGWKKSRGRGPRSGGRKGGGSGEGGMS
DLDSDSDSGSSTSSRRSESSDDSVDSDAERERAALKMEEDGENSLLSMTLSQDGVPPESL
TDPFRVDWPKDRVLINRLDSLCTLVLSGQWPTGRRYASDAQLNPGSDDLGAGDELSFARL
MRKGNSTPGGEGADGEESEFTVKLLKEEGLKLTFSKHALMSNGSGGEGSGRRKRRDQELS
DPDGAVPVVNAMTGTVLSGERAPRRRDMPNWLKENPEYEVEGDMLELLVNRSKRKKKRTE
KAVALSGSEKINIIDMRTGKKVGAAHGPMLQDLREFLEENPDTAVAPEWAETARCSGFLP
DSLFHRLLSAHSVIPKRDRHHSHHHAPQPDPLEDPLLGGGEEETLVSDGAYMMEDEDLED
SSFLTQAFDVKMEGGDSLSQGGYESSDREALLDDVIMPQKDSDSSSSSED
NT seq
7713 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggacctctttgatgatacgccgctgttcaacctggatgctctg
ccaggcgatgccttcacccagggttcctcagaccctgtggaggaggctctgaagctggca
ctggggcagattgaccccccctatgaacccaccccagctctctgcacaccagtcgcagct
ccaataatcccagacccagtccctgtgcagcagcaggcctccgtcccatttgccctccct
cagactgtttcaatcgcttcaacagtacctcagacaacactctctgtagccagtaacact
agtcgggctgccacagtcctgctgggctcacctctgactgtcaatagctctgctggcacc
acacaacagatcacaacacaacaattcaccacacagcagctcacacagatcgcacagcag
cttactcctcagcagctagctgccatcacccagcaggccggggggcagggaggctccaag
atcgtcatcctgaaaggacctggggggcatgcacaggtgctgcagactgttcctgggaca
ggctctcaagcggggaaggtcacctttgccagggtactgtctggaacccaacttaggcct
ggcatgcagatactgtctgggggaacggtcctgaaccaagcgtctcctgggcagggaccg
gtgaaggtggggactgggatacagaggctagttcagtcgcccaacggacccctgaaacag
gtgcagttgatctccatgccccagggccagacgcaaactgtccagatgcaaataccgcag
gcccagcttgcccaatcgcagcaaatccagctacaaccccagacacaggtacagctgcag
tctaccatgcaaacacaggttaccgccactgctacaggcaccacttcagtacgaccacaa
ggggttaccctcactacagtaccacagcagggtgaagctaagaggattaccctggtgctg
cagcagccccatggtggcacgacccaggggggtgctgtgacggtgggtggttcgggtcag
ctgcagcagggccagcagcagaggctggtgttgggtaacctcccagggaagctggtcctc
caagggggtcagctggctgctctcacccaggccagggcagggcagacgggggcgcagcct
aaagtacttaccatccagctgcaagtgcagcagcaacccaaccaacaggggggacccaag
tttcagctggtgtctggagggcaaggtagcagcccacaggtggttcagatctcccagggg
caaggtgggcagagactggccatgcccctcaaactgctgctgcaaccacagatgagctcc
acctccacagcaggcggtaccgtctccgtagtgaaggtcatcaacacctcggctgctggc
tctgccccttccaccaccaccaccatggcatcaacagggatacggctagccaaggcccag
gagcctgtacggcgtgtggagaccctgggcaagcaggagaaggccaaccgcattgtggcc
gaggccattgccagagcaaaggcccggggagagaggaacattccacgagtcctcaaccag
gacgaactgcctcctggacagaaggctgctgacaaaggggctgctgcaacgaccactggc
acacctggagccaagaagaaggggggaggaggcgggagtaagaagaaaagcccaccaggg
gcgggggggaagggcatggcttgtgctgagaagaaaggcaaggccaaggcagcaggtgga
gctgctgtagggacacctgtaggggtggctggaaccagcggcagcaaaagcaaaagcaag
gcaaagatcaatacgatcactctagtggggggtaagaagaggaagaggaatgcatcctca
gaccactctgatggggacttgagccctgcctctccctctaaggccctggaggaggacatg
ttagcaaagaggcgctctaaccgtcaggtgaagaggaagaagtacacggaggacttggac
atcaaaatcactgacgacgaggatgagccggaggaggacgtggacgtaaccacgacggca
gcggtggcgtccattaccggaggggctgcggggcagctgatgggagagcagctcaaacag
gagctgcagttggacggggatggcctttccagcatgcagttctttgtggaaaaccccaac
gaggaagatgcagcaattgtcgacaaagtcttgtccatgaggctaactaagaaggaggtg
tctccaggacattatataaatgctgaggaattctttgtcaaatataagaactactcctat
atgcactgtgagtgggccactctggagcagctggagagagacaagaggatccaccagaag
ctgaagagattcaagatcaaacacgcacagatgagactcctcttacaggaggaggaggag
cccttcaacccagactatgtggaggtggaccggatcctggatgaatccaacagtgtggac
aaggacaacggagagccggtggtttattacttggtgaagtggtgctctctgccctatgaa
gacgccacctgggagctgagggaggacgtggatgaggacaaggtggtggagtttaggaag
atccaggaccgccaacctcagctcaagagaacgccccgaccccaagcggctgcatggaag
aagctggaggaattcagagagtacaagagtgggaacgtacttcgagaataccagctagag
ggagtcaactggctgctcttcaactggtacaacaggcagaactgtatcctggctgatgag
atgggtctagggaagaccatccagtccatatctctgctgtctgaggtgcttggtgccggg
gtccaaggccccttcctggtcatcgcccccctctccaccatcaccaactgggagagggag
ttcgccacctggactgacatgaatgccatcgtctaccacggcagcctggccagcaggcag
atgatccagcagtacgagatgtactgcaaggacgacaaggaccatctgatcccaggggca
tataaatttgaagccctgatcacgacttttgagatgattctgtccgactgccctgagctg
agggagatctcctggcgctgtgtgatcattgacgaagcccaccgcctcaagaaccgcaac
tgcaagctgctggacagcctcaagatgctggacctggagcataaggtgcttctgacaggc
actcccctccagaacacagtggaggagctcttcagtctgctgcactttcttgagccagct
cagttctcctcggagtccgagttcttacgtgactttggagacctcaaaaccgaggagcag
gtccagaagctccaagctattctgaagcctatgatgctgcgcagactcaaagaggatgtg
gagaagaacttggcgccaaaacaggagaccatcattgaggtggagctgacagatgtgcag
aagaaatactaccgggccatcctagagaggaactttagtttcctcagcatgggggcaacc
agcaacagcaacgtccccaatctgctcaacaccatgatggagctgcgcaagtgctgcaac
cacccctacctcatcacaggggcggaggagtctattgtggctgagctgagggaggtgtac
gaccccatggtgccagacttccacctgcaggccctggtgagatctgcaggcaagctggtc
ctgctggacaaactgctgcctcgcctgaaggccgggggacacaaggtgctcatcttctcc
cagatggtgcgctgcctggacatcctggaggactacctcatcaacaagagatatctgtac
gagcgtattgatggcagagtgagagggaacctgcgtcaggcagccattgatcgcttcagc
aaaccagactcggaccgtttcgtcttcctgttgtgtacccgggctggaggcctgggcatc
aacctgactgctgctgacacctgtgtcatctttgactcagactggaaccctcagaatgat
ctgcaggctcaggcgcggtgtcaccgtatcggccagtccaaggcggtgaaggtgtaccgt
ctgatcaccaggaactcctatgagagggagatgttggacaaggctagcctcaaactgggt
ctggaccgggctgtactgcagagcatgagtggcaacaaggagagcaacgtcaacggacaa
atccagcagttctctaagaaggagatcgaggacctcctgaggaagggggcgtacgctgcc
atcatggacgaggaggacgagggctccaagttctgcgaggaggacattgaccagattctc
cagaggagagcaaccaccatcaccattgagagcgagggcaagggctccaccttctccaag
gccagctttgtggccaccgagaacaggaccgacatcgccctggacgaccccgagttctgg
cagaagtgggccaagagggcagacattgactttgattccatgaacaggaagaacactctg
gtgattgacacacccagagtaaggaagcagacacgtcagttcgctaccctgaggggcgag
ggcggggagatctctgaccccgacagcgatgacgagtatccgcccgccaattcccggcag
tcccggtcctcaaggcgctccgagcgccacaccggaaatggctatggccgcaccgattgc
ttccgtgtggagaaacaccttcttgtttacgggtgggggcgctggcgggacatcctgtct
catgcacgctgtaagcggcgcctcggggagcgtgacgtggagaccatctgcagggtcatc
cttgtcttctgcctgctgcattaccgtggcgacgagaacatcaagagtttcatctgggag
ctcatcacccccccagagaatggccgggaaccacacacactcctcaaccactctggtctg
tccatccctgttcctcggggcaggaaggggaagagggtgaaggcccagagctcatttgac
gttcagaaggtggagtggatccgcaagtacaaccccgactccctgcttctggacgacagc
taccgcaaacatctcaagcaccagtgcaacaaggtgttgctgagagtgcgtatgctgtac
tacctgagacaggaagtcattggagaacacgccgattctgtgctgagaggagccgatgcc
agggatattgacatctggatgcctgagatggagcagcaggaggtgccatcaggctggtgg
gatacagaggcagaccgctccctcctcgtcggtgtcttcaaacacgggtatgagatgtac
accaccatgcgcgccgacgactgtctctgtttcctggagagagctggtcgccctgacgac
caggccattgatgcggagcagcactctgcagacgcagagctgggagacggaggagacgat
gacaagtattctgaagacccagagttcaagcctgcgtcaaggcacaccaaagacctgtac
gaggaggctgactccatgaacatgagtgacgatatttgtgtcgatgacaagccggggcct
gttaaaaccaagggaccgccttctggcctgtcaggagcctgtgagtggccgaccagctcg
tcacttaccgcgcggctccggcgtctgatcaccgcataccagcgcagctacaagagagag
cagctgaaggtggaggcagcagagaagggcgaccgcaagcgcaggaggtgtgagcaggcc
agtaagctgaaggagattgcacgccaggaacgccaacagaggtggacccgcagagaggag
tgtgatttctaccgtgtggtgtccacgttcggtgtcgagaggataaaagagccaaatgcc
caagagggggaggatgctaaactggaatgggcccgcttccgaaccttcgcccgtctggac
aagaagacggacgagagtctgagtcgctacttccgctgtttcatggccatgtgccggagg
gtgtgcaacctgcggcccgcccgcggagaagacccgtcagatttggggcagtctatggcc
cccatcaccgaggagcgggcatctcgcaccctgtaccgcatcagtctactgcgccgtctt
cgtgagcgtgtcctgccccacccctccatggaggagagcctgctgctggccccactcagc
tccgagcttcctgtctggtggagcactccggcccacgaccgggaactcatgctgggcgcc
gccctccacggcgtcagccgcaccgagctttcagtcttctccgacccgcagttctccttc
agtcaagcccgccacgactacctcgagatgcagcagaaccagcccgcccctgccagtccc
ctccgccaaccacaggcagaggacggctccgccgtcaaggaggaggagggactgaacagg
gagtccggcctccttggagcttctgaggctctcggccactctgatacacagaccacaccc
ctctctcaccctgatgggaaggaacgtgatcgcaccggcttgggctggaagaagagcagg
gggaggggcccgagaagcggaggaaggaaaggcggaggaagtggagaaggagggatgtct
gatttggattcagactctgattcaggctcgtctacctcttcccggcgatcagaaagctct
gacgacagtgtggacagcgacgcagagagggagagagctgctctgaagatggaggaagat
ggagagaacagcttgctctcaatgactctatctcaagatggcgtgccaccggagtccctc
actgaccccttcagggttgactggcccaaggaccgtgtgttgataaaccggctggacagc
ctctgtacactggtgctgtctgggcagtggccgacagggcggcgctacgcctctgacgcc
cagctcaacccaggctctgacgacctaggggcaggggatgagctcagctttgcacggctc
atgcggaaaggcaacagcactcccggtggagaaggagcagatggagaggaatctgagttc
acggtcaaactcctcaaggaggaggggctgaagctgaccttctctaagcatgccttgatg
tccaacgggtcagggggagaggggagcgggcgcaggaagcgtagggaccaagaattgtca
gatccagacggagcggtcccggtggtcaatgccatgacgggcacagtgctgagtggggag
cgggcccctcgacgcagggacatgcccaactggctgaaggagaacccagaatatgaggtg
gagggagacatgctggagctccttgtgaacagaagcaagaggaagaagaagaggacggag
aaggcagtagcgctgtcgggcagtgagaagattaacataattgatatgaggacaggaaag
aaggttggggctgcgcatggacctatgctgcaggatctgagggagtttctggaggagaat
cctgacactgcagttgcaccagaatgggctgagactgcccggtgctctggctttctgcca
gacagcctcttccaccggcttctctccgcacactctgtcattcccaagagagaccgtcac
cacagccaccaccacgctccccagcctgacccgctggaggacccactcctgggcggaggt
gaagaagagaccctggtctcagacggtgcctacatgatggaggacgaagacttggaggat
tcttctttcctgactcaagcctttgatgttaagatggaaggcggcgacagcttgtcacaa
ggcggatacgagagttctgacagggaggcccttttggacgacgtcatcatgccgcagaag
gactcggactcttcctccagctcagaggattga
DBGET
integrated database retrieval system
