Oncorhynchus mykiss (rainbow trout): 110508744
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Entry
110508744 CDS
T07259
Symbol
astn1
Name
(RefSeq) astrotactin-1 isoform X1
KO
K24479
astrotactin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110508744 (astn1)
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
110508744 (astn1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASTN_1_2_N
Annexin_2
ASTN1_2_fn3
FXa_inhibition
TM_ErbB1
fn3
NDNF
Motif
Other DBs
NCBI-GeneID:
110508744
NCBI-ProteinID:
XP_036821871
Ensembl:
ENSOMYG00000046816
LinkDB
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Position
28:complement(22286666..22527081)
Genome browser
AA seq
1318 aa
AA seq
DB search
MRGMMGLRLLVSLAWILAFKAANIQGVNADEDQSQDMECKMKSVTVSALPFLRENDLSIM
HSPSASEPKLLFSVRNDFPGEIVVVDDLENTELPFFVLEITGNSEDIPLVRWRQQWLENG
TLLFHIHHQDGSQNLPGLSATDDPSSDSAEEELRILHVSVMGGMIALLLSILCLVLILYT
RRRWCKRRRVPQPQKSASAEAANEIHYIPSVLMGGQARESLRNSRGQGHNSSGTLSIRET
PILDGYEYDITDLRHHLQRECMNGGEDFASQVTRTLDSLQGCNDKASMDLTPGEWSDNTK
LSLMSKYKDNIIATSPIGSNHLQQNTLLLHNTSSTGQRKQRLSSKTRVGSTFLNPDGDSG
TEADSEPQLTFYTDPNRSRRRSRGMRNGNANSAWGSGAGSPRSPINKTTLTLISVVSCVI
GLVYSSHLSCGLNVRVILHVPEHLIADGSRFILLQGSQLDASDWLNPAQVLLYYQQNASG
PWINELCGRRILDPCEHQCDPETGDCLCLDGYMKDPVHKHLCIRNEWGPNQGPWPYTIFQ
RGFDLVMGEQPSDRIFRFTYTLGEGMWLPLSKSFVIPPAELAINPSAKCKTDMTVMEDAV
DVREELMISSSFDSLEVLLDSFGPVRDCSKDNGGCSRNFRCVSDRKLDSSGCMCPPGLSP
MKDGTGCYDHHIGIDCSDGFNGGCEQLCLQQLAPLEDDPTLYNIQMFCGCIEDYKKGQDG
RSCQPLSEACTEGLDCGETADIPANQTVFGDLFYGYNNHTKEITSGQILKATFRQKNFAR
GIEQQLPDGMVVASVPTEVQCHEELSDPVPDPDYLTGMVNYSEVSGYPLIQQWRLRSILY
HVKLNQWVLSQAFSSAIHSLDGATLRSDFVSILREFGNHFVQEAVYGFEEACTIWYPNKQ
VQRQLWLEYQDISKGNSPSEESEERDKEPRTLTYPAYIASLLDSGAKRMAVGVRMDCSSQ
GQCPYSCHLCHMSPGPGRPAEPVLLQMTKATPLYELVSNNETYQALQEAMMSMLWCSGKG
DVIDDWCRCDSNAFGMDGLPTCAPLPQPRLRLSHSYEPSSSLVIMEWNHTEPLIGVRIVD
YLISQEKVTERTDHSKVETETMLSFVDDILSGAKSPCVMLGDIPDLLTSSVSMIIRCLEP
DTTYMFRLWAVDNTGRRSSPSEVTIKTPCPAVDDVKAQEISDKIYNLFNGYTSGKEQQTA
YNALMELGSPTLHRVLYHYNQRYESFGEFTWRCEDELGPRKAGLILSQLDDLSGWCRGLL
QESKIGLRRMSLKYLSCRYTDTKAFGLNWVELGQDVRKACDEQNLLVMYNDYGEPKER
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcatgatgggtctgagattgcttgtctcactcgcatggattcttgccttcaaa
gctgctaatattcaaggtgtgaatgccgacgaggatcagtcccaagatatggaatgcaaa
atgaaaagcgtcaccgtgtctgcgttgccgtttttgagagaaaacgacctgagcatcatg
catagtccgtcggcctccgagcccaagcttctgttctccgtcagaaatgatttcccggga
gaaatagtcgtcgtggacgatctagaaaacactgaactcccctttttcgtcctagagatc
acgggaaactctgaggatattcctctggtgcgatggcggcaacagtggctggagaacggc
acgttgctctttcatatccaccatcaagatggcagccagaacctccccggcctctccgcc
acggacgacccttccagcgactctgccgaggaggagctacgcatcctccacgtctctgtc
atgggaggcatgatcgctttgctcctctccatcctctgcctggtcctcatcctctacacg
cgcaggcggtggtgcaaacgccgccgtgtgccccagccccagaagagcgccagtgcagag
gcagccaatgagatccactacatcccttcggtattgatggggggccaggccagggagagc
ctgagaaactccaggggccagggccacaattccagcggcacgctcagtatccgagagact
cccatcctggatggctacgagtatgacatcactgacctgagacaccacctgcagagagag
tgcatgaacggaggagaggactttgccagccaggtcacacgcaccctggactcccttcag
ggctgcaatgacaaggccagcatggacctgacacctggtgagtggagtgacaatacaaag
ttgtccctaatgagcaagtacaaggacaacatcatcgccaccagccccatcggcagcaat
cacctgcagcagaacactctcctcctccacaacacctcctccactggccaacgaaaacaa
cgtctgtccagcaaaactcgtgtgggttcaaccttcttgaacccagacggggactctggc
acggaggccgacagcgaacctcagctgaccttttacactgaccccaatcgcagcaggcgc
cgcagccgaggtatgagaaatggtaacgccaacagcgcgtggggctcaggggcaggttcc
ccacgaagccccatcaataagaccaccctgactttgatcagcgttgtcagctgtgtgatc
ggcctggtgtactcctcacacctctcctgtggcctcaacgtcagggtcatactccatgtg
cccgagcacctcatcgcagacgggtccaggttcattttgctgcagggcagtcaactggat
gcatctgactggcttaacccggcccaggtgttactatactaccagcagaatgccagcggg
ccttggatcaatgagctgtgtggccgccgcattctggacccctgtgaacaccagtgtgat
ccagagacaggtgactgtctctgcttagatggttacatgaaggacccagtccacaagcat
ctctgtattcgtaacgagtggggtccaaatcaaggaccctggccttacactattttccag
cgtggttttgatctggtgatgggagaacaaccatctgatcgcattttcaggttcacatac
acattgggggaagggatgtggttaccattaagtaaaagctttgtcattccacctgctgag
ctggcaatcaacccttcagccaagtgcaagactgatatgactgtcatggaggatgctgtg
gatgtgagagaagagctgatgatctcctcatcgtttgacagtctggaggttttactggac
tcgtttggcccggtgcgcgactgctcaaaggacaacggtggttgtagccgaaacttccgc
tgcgtctctgaccgcaagcttgattccagtggatgcatgtgccctcctggactgagtccc
atgaaggatggcacaggctgctatgaccaccacattggcatcgactgctctgacggcttt
aacggaggctgtgaacaactgtgcctccagcaactcgcccccctggaggatgaccccact
ctttacaacatccagatgttctgcggttgtattgaggattacaagaaaggtcaagatggt
cgttcctgccagcccctgtctgaagcctgtaccgagggactggactgtggggagacagct
gacatcccagccaaccaaaccgtttttggggatctcttctatggctacaacaaccacacc
aaggagatcacctctgggcagatcctcaaagctaccttcaggcagaagaactttgcccga
ggcatcgagcagcagctcccagatggcatggttgtggcatcagttccaaccgaggtgcaa
tgccacgaagagctgtcagacccagtccctgacccagactatctcacaggaatggtgaac
tacagtgaggtctctgggtacccactcatccagcaatggcggctgaggtccatcctgtac
cacgtcaaactgaaccagtgggtactctctcaagcgttcagctctgcgatccactccctg
gacggtgccaccctccgcagtgattttgtctccatcctcagggagtttggtaatcacttt
gtacaagaggcagtgtacggcttcgaggaggcctgcactatctggtaccccaacaagcag
gtccagaggcagctgtggctggagtaccaggacatcagcaaagggaattccccatcagaa
gagtcagaggagcgcgacaaggagccccggaccctgacctacccagcgtacatcgccagc
ctgctggactccggtgccaagcgcatggcggtgggggtgcgcatggactgcagcagccaa
ggccagtgcccgtactcctgccacctctgccatatgagccctgggcctgggcgtccagct
gagcctgtactgctccagatgactaaggccaccccgctctacgagctggtctccaacaac
gagacctaccaggcactgcaggaggccatgatgagcatgctctggtgttctgggaaaggt
gacgtcatcgatgactggtgccgttgcgactcgaacgcattcgggatggacggcctgcca
acatgtgcacctctcccccagcctaggcttaggttgtcccactcctatgagcctagcagt
tcattggtcatcatggaatggaatcacactgagccactaattggggtgcggattgttgat
tacctcatcagccaggagaaggtgacagagaggacagaccactccaaagtggagacagag
acgatgttgagctttgtggatgacatcctgtctggggccaagtctccgtgtgtgatgctt
ggggatatccctgacctcttgacctcctccgtgagcatgatcatccgctgcctggagcca
gacacaacatacatgtttaggctctgggcagtggacaacacaggccgtcgctccagtcct
agtgaggtcaccatcaagaccccctgtcctgctgtggatgacgtcaaagcacaagagatt
tcagacaagatctacaacttgttcaatggttacacaagtggcaaggagcagcagacggcc
tacaatgcgctgatggaactgggctctcccaccctgcaccgtgtgctctaccactacaac
cagcgttacgagagcttcggagagttcacctggagatgcgaggatgaactggggcccagg
aaagctggcctgattctctcccagctggacgacctgagtggctggtgcaggggtcttctc
caggagtccaagatcggcctgcgcaggatgtccctcaagtacctgtcctgccgttacaca
gacaccaaagcctttggtctcaactgggtggaactgggccaggatgtgcgaaaggcctgc
gacgaacagaacctgctagtcatgtacaatgattatggggagcccaaagagcgttga
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integrated database retrieval system