Oncorhynchus mykiss (rainbow trout): 110508784
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Entry
110508784 CDS
T07259
Name
(RefSeq) partitioning defective 3 homolog isoform X4
KO
K04237
partitioning defective protein 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04144
Endocytosis
omy04517
IgSF CAM signaling
omy04520
Adherens junction
omy04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110508784
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110508784
09144 Cellular community - eukaryotes
04520 Adherens junction
110508784
04530 Tight junction
110508784
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omy01009
]
110508784
Protein phosphatases and associated proteins [BR:
omy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110508784
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
110508784
NCBI-ProteinID:
XP_021445275
Ensembl:
ENSOMYG00000046548
LinkDB
All DBs
Position
28:24687485..24915445
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AA seq
1400 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNIKIHILILQAVMRYKKAIAKDASYWLHVHRLEHGDGGILD
LDDVLCDVADDKDRLVAVYDEQEPHHGGDGTSASSTGTQSPDLFATELNTSSVSAFQPYQ
AASEIEVTPSALRTNMPLHVRRSSDPALATVNGPFSDPRVTLPPEEPSRKNPTRWSTTAG
FLKPRHSVGDTSTEANSLERKGKVVDTYRSLPRDSGTWANQREFQRETARSSLSANHPMV
DRWLERQEQEEGGHGEEENGRIQPVGRADSCMAHTPVRSLDDIVKLVEVSNDGGPLGIHV
VPFSAQDRRTLGLLVKRLERGGKAEQHCLFQENDCIVRINNGDLRNIRFEQAQNMFRQAM
RSPVIMFHVVPNLMKAQYEQLSHSERNPNVAYSSGSFSPDSLASERGSTTSGLDHTPQRM
SRGPHPHQHPEQGDAYTSLPHPHGLAHGGSMGKPPLGHAPPGRTPSPHRVLNSTPTAGFT
KKVGRRLNIQLKKGPEGLGFSITSRDVPIGGSAPIYVKNILPRGAAIQDGHLKAGDRLLE
VNGVDLVGLTQEEVVCLLRATPMGGAVGLVVLRQEETFLPREVNAEPQMQSPRDLKIEED
DLVLTPDGTREFLTFEIPLSDSGSAGLGVSVKGNRSKENHSDLGIFVKSIINGGAACKDG
RLRVNDQLIAVNGESLLGKTNQEAMETLRKSMSVEGNKRGMIQLIVARRVTKRNEMEASG
SPLGPEQTLNSTLLDDRERRISHSLYGGIEGLDDNLMPRQTLMGRMMGNYQLSPTVNMPQ
DDTVIIEDDRLPVLPTHLSDQSSSSSHDDVGVPPPWAKEIQIQNESPLSPDDTDPDGAFQ
REGFGRQSMSEKRTKQFGDAGQLEIIKTRKSKSMDLVADEINLTPRKENTPGSSTRDVGP
FLGLKKSSSLESLQTAVAEVTLNGDMPFHRPRPRIIRGRGCNESFRAAIDKSYDRPAATE
DDDEDMETLEEDTEGSSRSGRDSVSTVADLTPLPNTERPLVNGNRTDEDEKDKGGNDKKK
QKDKEKDSKNKAKKGMLKGLGDMFRFGKHRKDGEKIERKGSSKWRPEELQASEEETLRMR
LEQERIQLKTRELRERQARERDYAEILDINLSRDEEHPYAGIGPLDMSLGSGHSRPQSPR
DNDHHHQDSSLYTQVGKARNANGRPPSADSNRLAPSNHDRIQRLRHEFQQAREDDDPDDR
RRTYSFEQPWQNTTNTGPSPYQTDRQQTGRHSVSVEMQMQRQRQEERDAFQQAQRQYSSL
PRQPRKNPSSISQDSWVKVYPPGEGFQTTKENPRYSSYKGSRNGYPGVSSVNARVLLEAQ
ELLRQEQRRREQKAKGKQLLLAPPQEHHGNNTYNATPSYSAHKDPVSPKGPYRQDVPPSP
SQLARLNRLQGPEKGRPFYS
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgactgtgtgttttggaaggactagggtggtggtaccgtgcggagatggaaat
atcaaaatccatattctcatcctgcaagccgtcatgagatacaaaaaagcaattgcaaag
gatgccagctactggttacatgtgcaccggttggagcatggggacggaggtatcctggac
ctggatgacgtgctgtgtgatgtggctgatgacaaagaccggctggtggcggtgtatgat
gaacaggaacctcaccatggtggtgacggcaccagcgccagctcaacgggcacccaaagt
cccgacctgtttgccaccgagctcaacacaagcagcgtgtctgctttccagccctaccag
gccgccagcgagatagaagtcactccgtccgcactccgaactaatatgcccctccatgtg
cgtcgcagcagtgatccagcactggcgacggtcaacgggccattcagcgacccccgtgtg
accctgccgccagaggagccgtccaggaagaaccccacccgctggtccaccacagctggt
ttcctcaaaccacgacactctgttggagacaccagcactgaagccaacagcctggagaga
aagggtaaggttgtggacacgtaccgtagtctcccccgtgactcagggacctgggcaaac
cagagagagttccagagagagacggcccgctcctccctgagcgccaaccaccccatggta
gaccgctggctggagagacaggagcaggaggagggggggcacggggaggaagagaacggc
aggatccagccggttggccgagctgactcctgtatggcccacacccctgtgaggtcactg
gatgacattgtaaagctggtagaagtgtccaatgacggtgggcccttgggaatccatgta
gtgcctttcagtgcccaggaccgcaggactctcggcttgttggtcaagcgcctggagagg
ggaggcaaggcggagcaacattgtctgttccaggagaatgactgcatcgtacgcattaat
aatggagacctgcgaaacatccgcttcgaacaagcccagaacatgttccgccaggccatg
cgttcaccagtcatcatgttccatgtggttcccaacctgatgaaggcccagtacgagcag
ctgtcacacagcgagaggaaccccaacgtggcctactcctctggaagcttcagccctgac
tccctagccagcgagagaggcagcacaacctcaggcctggaccacaccccacagaggatg
tcccgtggtccccaccctcaccagcaccccgagcagggtgacgcctacacctctctacct
cacccccatgggcttgcccatgggggctccatgggcaagcccccattaggccacgcccct
ccaggccgcaccccctcccctcacagggtgctaaactccacccccacggcgggcttcacc
aaaaaggtcggcaggagactgaacatccagctgaaaaaaggtccggagggtctgggtttc
agcatcacatcgcgtgacgtccccatcggcggctcggcgcccatctacgtgaagaacatc
ctgccccgaggagctgccatccaggacggacacctcaaggctggagacaggctgctggag
gtgaacggagtggacctggttgggttgacccaggaggaggtggtctgtctgctgagggcc
acgcccatgggaggggctgtggggcttgtggtgttacgacaggaggagaccttcctgccc
agagaagtgaatgcagaaccccagatgcaaagccccagagatttgaagattgaggaggat
gacctggtgttgaccccggatggtaccagggagttcctgacctttgagatccctctgagt
gactccgggtcggcggggttaggggtcagcgtcaagggcaaccgctccaaggagaaccac
tctgacctgggcatcttcgtcaagtccatcatcaacgggggagctgcctgcaaggatgga
aggctgcgggtcaacgaccagctgatagcggtgaacggggagtcgttgctaggcaagacc
aaccaggaagccatggagacgctaaggaagtccatgtcggtagagggcaacaagcggggg
atgattcagctgattgtggccaggagggtcactaaacgcaacgagatggaggcctctggg
agccccctgggaccggagcagaccctcaactccaccctgctggacgacagggagcggcgg
atctcccactccctgtacggaggcatagagggcctggacgacaacctgatgccacggcag
acactaatgggccgaatgatgggtaactaccagctctcccctacagtcaacatgccccag
gacgacacagtcatcatcgaagacgataggctgccagtacttcctacccatctctctgac
caatcgtcttccagctcacatgacgatgtgggggtccctcccccctgggccaaagagatt
caaattcagaatgagagccctctgagccctgatgacaccgacccagacggagcctttcag
agggagggcttcggcagacagagcatgtctgagaaacggacaaagcagtttggagatgcc
ggtcagctggagatcatcaagacacgcaagtccaagagcatggatctagtagccgacgag
attaacctcacccctcgcaaagagaacacaccagggtcttccaccagggacgtgggtcct
ttcttaggcctcaagaagtccagctctctagagagtttacagacagccgttgccgaggta
acgctgaacggtgacatgcccttccacaggccacgcccacgcatcatcagggggcggggc
tgcaatgagagcttccgggctgccatcgacaagtcatacgacaggccagccgctacagag
gatgacgatgaggacatggagacattggaggaggacaccgaggggagctctcggtccggg
cgcgactctgtgtccaccgtggcagatctgacgccactgcctaacaccgagagaccgctg
gtcaacggcaaccgcaccgatgaagacgagaaggacaagggagggaatgacaaaaagaaa
cagaaggacaaagagaaggacagcaagaacaaggctaagaaaggcatgctgaaaggcctg
ggagacatgttcaggtttggtaaacatcgcaaggacggagagaaaattgagcgtaaaggg
tcaagcaagtggaggccggaagagctgcaagcctcagaggaagaaacactgaggatgaga
ctggagcaggagaggatccagcttaagacccgggagctgcgggagcggcaggcacgggag
agggactacgctgagatcctggacatcaacctgagccgagatgaggagcacccctatgcc
ggcatcgggcccctggacatgtccctgggcagcggacacagccgtccccagagcccccga
gacaacgaccaccaccaccaagattcctccctctacacacaagtcggcaaggcccgcaac
gcaaacggacgccctccctccgccgacagcaacagactagcgcctagcaaccacgaccgg
atacagcggctgaggcatgagttccagcaggccagggaggacgatgacccagacgaccgg
agacgcacatatagcttcgagcagccctggcagaacaccaccaacaccggtccaagcccg
taccagacagacagacaacagacaggccgacactctgtgtctgtagagatgcagatgcag
agacagaggcaggaggagagagacgccttccaacaggcgcagagacagtacagctctctg
ccacgacaacccaggaagaaccctagctccatctctcaggactcctgggtcaaggtctac
ccgccgggcgagggcttccagacgaccaaggagaaccctcgctactccagctacaagggc
tccaggaacggctacccgggggtgagcagtgtgaatgcccgcgtcttgctggaggcccag
gagctgctgaggcaggagcagagacgcagggagcagaaggccaaagggaagcagctacta
ctagcacccccgcaggagcaccacgggaacaacacctacaacgccactccgtcatactca
gctcacaaggaccctgtgtcgcctaagggcccctatagacaggacgtacccccctcgccc
tcccagctggccaggctcaacaggctgcaggggcctgagaaggggaggcccttctactcc
tga
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integrated database retrieval system
