Oncorhynchus mykiss (rainbow trout): 110508821
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Entry
110508821 CDS
T07259
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110508821
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110508821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
110508821
NCBI-ProteinID:
XP_036822316
Ensembl:
ENSOMYG00000047790
LinkDB
All DBs
Position
28:27348104..27454444
Genome browser
AA seq
3155 aa
AA seq
DB search
MADPGMLSLFGDDANLFSDELEGLGDCGFPQGQPNPIGQQEHQGYRSLSSNSLHHPSQAG
PGQPKMGHPYDPFAGYEQQQGNGPAVNGMVTPHSRYHNSPQQPGGGHHVYPRAQGDGHGQ
SFPDGGAVWGPQTGPGQGRPPFQQQQASPQGPSHQQHGPSVPQAPSHQQHGPSGPQAPSH
QQHGPSGPQAASHQQHDPSGPQDHGHRMGPYMGRSDYATMQGHPGQTQTPPRINHFPPGM
GQEPNHYMGHVGLQQNSSMTAHPAQQQQPPQQFLHRPGQGPVHTQDHMASHTSHQQHQGL
AGRPHQNMGFNMHGQAASPDAVTSSGPYPPYPQYGNLNQGLAGSAGMSPRMSLSSTSNNN
SSACGPMGPDQVQCYPNAGGAPQCYPDPQVHRQPVHPNQITGQPMHPSQAQATPHKQPHL
PTPPHGSYGSPTSMSPMKGMGTTAVTPLPQQVRPPSAGLAPEVGAYPGVPLQAPNPMAPP
QRNTTPLGVQQPQHHPQHLSHPQQHPHMPPSQQLYQGMSPNQRGPLDQVRPPGPMAHGEH
PGPQDQQLLTPQQQAPKSGLQPPPMAFQQQVHPAQTALPPSQAQTHLAGPHHQSSPPNQP
PWAPAGHQSPTTPQKVPHIQYSTSSEMTASDRTPASGANLQPANRDKKPTEQKPKKKKAK
VMVEGEKKPKKKKGGCIEECGEEGKRKVGDGPWAEVNCLTGALEESLVVKTKKKPKEPKE
PKTPKTPKTPKEPKEKAKSTTPKVKMPKKPRSTKKVESAEGSGSSVKEIKRTREPSVSSD
VEKSPPGPSDEDDDDDGVQKRRSSRQVKRKRYTEELEFRISDDDGDVSPTPKSPFNTSEQ
QEVETEGPVVEKILSIRMGKKEMESGEKMEVEEFYVKFKSFSYLHCRWADLEELEKDKRI
HQKVKRFRAKQALPTFVTEMDDEPFNPDYVEVDRVLDVSESTDENGEPVKLYLVKWCSLP
YEDITWELKADIDQAKIDEYEAVAARQPETKRVERPPTENWQKSESSRDYKNDNALRDYQ
LEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWE
REFRTWTELNVIVYHGSQASRKTIQAYEMNYRDVQGRVIKGAYKFHAVITTFEMILTDCP
ELRSVSWRCVVIDEAHRLKNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELFSLLNFLE
PERFPSENTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTN
IQKKYYRAILEKNFSFLSKGGPGGGGGAWGGGGAQVPNLLNTMMELRKCCNHPYLINGAE
EKILDDFRENHHAEMPQFHLQAMIQAAGKLVLIDKLLPKLKAGGHRVLVFSQMVRCLDIL
EDYLIQKRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCI
IFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM
SGRENAANGVPQLSKKEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTQTITIES
EGKGSTFAKASFVAAGNRTDISLEDPDFWQKWAKKAELDMEAINGRNTLVIDTPRVRKQT
RHYSSMKEDELAEFSELESDGENEKPLTKLRRPQDRAHGYPRSECFRVEKNLLVYGWGRW
GDILSRGRFKRPLQEQDVETICRALLAYCLLHYRGDENIKRFIWDLITPSEDGQSRTLTN
HSGLSTPVPRGRKGKKGKPAPPAPPQLPRAEWLASCNPDLLLQEDSYKRHLKHHCNKVLL
RVRMLYYLRQEVIGDHADRILEGTDSSEMDIWIPQPFHAEVPADWWDSEADKSLLIGVFK
HGYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGADMMADGPEGEDEDPEYKPLRMTFK
DEMEDFANSPLDDKDETVDIESGESKPGENIAGSRGAGRLYWPAASALTARLRRLITAYQ
RTHKREQLRQEAMARPDGRRRRRPREHLFSMVTDGGGAYVQEDGAFMAEGSPYMAKGGAF
IPEATVLPAEGGAAFKERRQRWTRREESDFYRVVSTFGVIYDTDRQLFDWTQFRAFARLD
KKSDESLEKYYFSFVAMCKRVCRMQVKANTELPDPTLIIDPITEERASRTLYRIELLRRI
REQVLPNPLLGERLRLCQPSSDLPEWWACRRHDHDLLLGASKHGVSRTDYHILNDPALGF
LEAHRKFTKGTSAGVPQPPRDGALSTASSSSTEQATATAGAEKSLPVQEEEEGKEMKEEG
DDIPCTKPEKPDEGKEEEMEAKKEEKAGSPKKVKDEKGEEEDREEKVEVTGDADGETSKE
AKPEKEYKAPTEETKDQDKKLDFLEKPESPKASEEQGTKKEERDEKEGSLAKSPKPVAEK
GPDEEKMEEDDKSEKSSQAEAGATSEQKNFDEESNASLSTTARDETRDGFCPEEEPSAIP
ALQERTTSSFWPKDRVMINRMDNICDAVIKGKWPANRRQFFDFPGLLPGYPGPMTSESPM
PRRSLAELSMTAQTNFSGSEDLTLSPQVNEDALSISLPKQRRRRRRKVEIEAERAAKRRN
LMDMVAQLRESHAAESQSQAMDLTKGILHQHHKSSAPSPVSFSSSMVSPAALKAQMELLQ
AATPSRHRANCSLAEADLPTRRRRGRRKNVEGLELLFMRGATEDSERTKASVEGLQMPPR
SHHHNIPSTSARVPSVSAMEDREAGTPSNKDLSDWLRQHPTYTMDMPTAYTPKSEETLLS
SQFPKPKQKRHRCRNPNKIDINTLTGEERVPVVNRRNGRKMGGAMAPPMKDLPRWLLENS
DFAVAPDWTDIVKQSGFLPEAMFDRLLTGPLVREEGVRRRGRRPKSEIAKATAAASSGGL
NPLLINSLFGGMDLTSLQGLQSLQSLQLQLMGFPGMGGADAKHASAMLPLMLPGMAGMGV
LPNMFGLGGLFASNLAAASPAAASNGTNNEDDSDETSKRDAREGGEEQDEEKDDTGEEEE
SSKAIGEAAALNVAAAATASSGMSANSMAFNPFLLSTMAPGLFSPYMFLPPGLGGLTLPG
FPPTALTDLQSAMAGAMGVASGAQGQEKEPNQVALDCPAAAIADPETADDSDSAESLEKT
AESSALEDETSALAGEADSPEDLEEGEDALEEEEK
NT seq
9468 nt
NT seq
+upstream
nt +downstream
nt
atggctgacccggggatgttgagcctgttcggggatgatgccaacctgttctcggacgag
ctggagggcctgggggactgtggcttcccccagggccagcccaaccccataggacagcag
gagcaccagggctacaggtcgctctcctccaactcactccaccacccctcgcaggccggc
cccggacagcccaagatgggccacccctacgacccctttgcaggctacgagcagcagcag
ggcaacggtcccgccgtcaatggcatggtgaccccgcactcgcgctaccacaacagcccc
caacaacccggaggggggcaccatgtctaccccagagcccaaggcgatgggcacgggcag
tccttccctgacggaggagccgtatggggcccccagactggccccgggcagggcaggcct
ccattccagcagcaacaggcatccccccagggcccctcccaccagcagcacggcccctct
gtgccccaggccccatcccaccagcagcacggcccctctgggccccaggccccatcccac
cagcagcatggcccctctgggccccaggccgcctcccaccagcagcatgacccctcaggg
ccccaggaccatggccaccgtatgggcccctacatgggccggtccgactatgccactatg
cagggccaccctggccagacccagacgccacccaggatcaaccacttccctccgggcatg
ggccaggagcccaaccactacatgggccacgtggggctccagcagaactccagcatgacg
gcccacccggcacagcaacagcagcccccccagcagttcctccaccggcccggccagggc
cctgttcacacccaggaccacatggcctcccacacctctcaccagcagcaccagggcttg
gccgggaggccacaccagaacatggggttcaacatgcacggccaggcagcctctcctgat
gctgtaaccagctcagggccgtaccccccctacccccagtacggcaaccttaatcaggga
ttagccggcagtgcagggatgagtccccgcatgagcctcagcagtaccagcaacaacaac
agtagtgcctgcgggcctatggggccagaccaagtccagtgttaccccaacgcagggggg
gccccacagtgctacccggatcctcaggtacaccggcagcctgtccaccccaaccaaatc
accggccagcccatgcacccctcccaggcccaggccaccccccataagcagccccacctc
cccacaccacctcatggatcttacggctctcccacctccatgtcccccatgaagggcatg
ggaaccaccgcggtcacacctctgcctcaacaggtccgaccccctagtgcaggtcttgct
cccgaggtaggggcgtaccccggagtgccactccaggcccctaaccccatggccccccct
cagagaaacaccactcccctgggcgtgcagcaaccgcaacatcatccccagcacctctcc
cacccacagcagcacccccacatgcccccgagccagcagctctaccagggtatgtccccc
aaccaaagaggccctctcgaccaggtgagacctccaggtcctatggcccacggtgagcat
ccaggaccacaggaccagcagctgctcactccccagcaacaggcacccaaatctgggctg
cagcctcctcccatggccttccagcagcaggtgcacccagcccagaccgctttgccccca
tcgcaggctcagacacatctggccggcccccaccaccagagctccccgcccaaccagcca
ccttgggcgccggcaggacaccagtcgcctacaaccccccagaaagtgcctcacattcag
tattctacgtcatctgagatgacagcttctgacaggacacccgcttcgggggctaacctc
cagccagccaaccgtgacaagaagcccaccgagcagaaaccaaaaaagaagaaagcgaag
gtgatggtggagggggaaaagaagcccaaaaagaagaaaggaggatgtatagaggaatgt
ggcgaggaggggaaacgaaaggtcggggacggtccctgggcggaggttaactgtctgaca
ggtgccctggaggaatcacttgtggtgaagacaaagaagaaaccgaaggagcctaaagag
cccaagactccgaaaacacccaagacccccaaagagcccaaggagaaggccaagagcact
acccccaaggtcaagatgcccaagaagcccagaagcactaagaaggtggagtcagcggag
ggcagtggcagcagtgtgaaggagattaagaggacgagggagccctcggtcagctccgat
gtggagaagtcacccccaggcccctccgatgaggacgacgacgatgacggtgtccagaag
cgtcgttccagtcgtcaggtgaagaggaagcgctatacagaggaactggagttcaggatc
tcagacgatgatggagatgtttcccccactcccaagtcgcccttcaacacctctgaacag
caggaggtggagacagaggggcctgtggtggagaagatcctgtccatacgcatggggaag
aaagagatggaatcgggagagaaaatggaagtggaagaattctatgtcaaattcaagagc
ttctcctacctgcactgtcgctgggcagatctggaggagctggagaaggacaaaaggatc
caccagaaggtcaagcggttcagggccaaacaggccctccccaccttcgtgacagagatg
gatgacgagcctttcaacccagactacgttgaggtggaccgggtactggacgtgtcagag
agcacagatgagaacggagagcctgtaaagctgtacctggtgaagtggtgttccctgccc
tatgaggatataacttgggagctgaaggccgacatcgaccaggccaagatcgatgagtac
gaggccgtggcggcccgtcagcccgagaccaaacgcgtggagcgacctcccaccgaaaac
tggcagaaatccgagagttccagggattataaaaacgacaacgcactcagggattaccag
ctggagggagtgaactggctgctcttcaactggtacaatacacggaactgcatcctagca
gatgaaatgggcctgggcaagaccatccagtccatcacattcctctatgagatctacctg
aaggggatccacgggcccttcctggtcatcgcccccctctccaccattccaaactgggag
agggagttccgcacctggaccgaactcaacgtgatcgtctaccacggcagccaggccagc
cgcaagaccatccaggcctacgaaatgaactaccgcgacgtgcagggtcgtgtgataaag
ggagcgtacaaattccatgcggtcatcaccacatttgagatgattctgacagactgtccg
gagctgcgcagcgtctcgtggcgctgtgtggtcatcgacgaggctcaccgcctcaagaac
aggaactgcaaactgctggagggtcttaagatgatggacatggagcacaaggtgctgctg
accgggacccccctgcagaacacggtggaggagctcttcagtctgctcaacttcctggag
cctgaacgcttcccctctgagaacaccttcatgcaggagtttggagacctcaagactgag
gagcaggtccagaagctgcaggccatcctgaagcccatgatgctgcgacgtctcaaggag
gacgtggagaagaacctggcccccaaggaggagaccatcatcgaggtggagctgaccaac
atccagaagaagtactaccgggccatcctggagaagaacttctccttcctgtctaaagga
ggaccgggaggaggaggtggcgcatggggaggcggaggtgcacaggtccccaacctgctc
aacaccatgatggagctgaggaagtgctgcaaccacccctacctcatcaatggtgcagag
gagaagatcctggacgacttccgtgagaaccaccatgccgagatgccccaattccaccta
caggccatgatccaggcagcgggcaagctggtgctgatcgataagctgctgcccaagctg
aaggccgggggacacagggtcctcgtcttctcccagatggtgcgctgcctggacatcctg
gaggactacctcatccagaaacggtacccgtatgagcgtatcgatggccgtgtgaggggt
aacctccggcaggctgcaattgaccgtttctctcgtccggactctgaccgctttgtattc
ctgttgtgtacccgggccggaggtctgggcatcaacctgaccgctgccgacacctgcatc
atctttgactctgattggaacccccagaatgatttacaggcgcaagccagatgccacagg
attggccagagcaaggcagtgaagatctacaggctgatcaccaggaactcctatgagagg
gagatgtttgacaaggccagcctcaagctgggcctcgacaaggctgtgctgcagtccatg
agtggccgagaaaatgcagccaacggggttccacagctgtctaagaaggaggtggaggac
ctcctccgtaaaggagcctacggagctctgatggacgaggaggacgagggctcaaagttc
tgtgaagaggacattgaccagatcctcctgagacgaacccagaccatcaccattgagtcc
gagggcaaggggtccaccttcgccaaggcgagctttgtggctgctgggaacaggacggac
atttccctggaggacccggacttctggcagaagtgggccaagaaggcggagctcgacatg
gaagccatcaatggacggaacacccttgtgattgacactccgagggtgcggaagcagaca
cgccactacagctcgatgaaggaggacgaattggcagagttctctgagctggaaagtgac
ggcgagaatgagaagcccttgaccaaactcaggcgaccccaggaccgagctcacgggtac
ccccgcagcgagtgcttcagggtggagaagaacctgctggtttatgggtggggtcgctgg
ggagacatcctgtcccgtgggcgtttcaagcggcccctgcaggaacaagacgtggagacc
atctgccgcgccctgctggcctactgcctgctgcactaccgtggcgacgagaacatcaag
cgcttcatctgggacctcatcacgccctctgaggacggacagagccgcacactcaccaac
cactccggtctgtctactccagtaccgcggggtcgtaaggggaagaaagggaaaccagcc
ccccctgcccctccccagctccccagggcagagtggctggccagctgtaaccctgacctg
ctactgcaggaggacagctacaagagacacctcaaacaccactgtaacaaagttctcctg
agggtccgtatgctctactatctgcgacaggaagtcatcggtgaccacgccgacaggatc
ctagagggaacagactcaagtgaaatggatatctggatccctcagcctttccacgccgag
gtgcccgccgattggtgggacagcgaggcagacaaatcgctgctcatcggtgtcttcaaa
cacggctatgagaagtataactcgatgcgtgccgaccctgcgctgtgtttcttggagcgg
gtgggcatgcccgacgccaaggccatcgctgcagagcagaggggggcggacatgatggca
gatggtccggagggagaggatgaagaccccgagtacaagcctctccgcatgacctttaaa
gatgagatggaggactttgcgaactcacccctggatgacaaagacgagactgtggacatt
gagagtggtgaatctaaaccaggtgagaatatagcaggcagcagaggggcgggtcgtctg
tactggccggcggcctcggccctcaccgctagactccgccgcctcatcacggcctaccag
cgcacgcacaagagggagcagctccgccaggaagccatggcccggcccgacggacgccgc
cgccgccggccccgagaacatctcttctccatggtcacagacggaggaggggcctacgtg
caggaggacggagccttcatggcagagggaagtccttatatggccaagggcggagctttt
atacctgaggcgacggtgctcccggcggaaggaggggccgccttcaaagagaggcgtcag
aggtggaccaggcgtgaggaatcagacttctaccgggttgtgtccacgtttggtgtgatc
tatgacacggaccgccagctctttgactggacccagttcagggccttcgcccggctggac
aagaagagtgacgagagcctggagaaatactacttctccttcgtggccatgtgcaagcgg
gtgtgtcgcatgcaggtcaaggccaacacagagctcccagaccctaccctgatcatcgac
cccatcacggaggagcgcgcctcacgcaccctctaccgcattgagctgctgcgtcgcatt
cgcgagcaggtgctgcccaaccccctgctaggtgagcgcctgcgcctctgccagcctagc
tccgacctgcccgagtggtgggcctgccgccggcacgaccacgacctcctcctgggcgcc
tccaagcacggcgtgagccgcactgactaccacatcctcaacgaccctgcgctgggcttc
ctggaggcccacaggaagttcaccaaggggacatcggctggggtgcctcagccgccccgc
gatggagctctctctactgcttcttcctcttccactgagcaggccacagctactgctggt
gctgagaaatccttacctgtccaggaggaggaagaagggaaggagatgaaagaggaaggt
gatgatattccatgtactaaacctgagaaaccagacgaaggcaaggaagaagagatggag
gcgaagaaggaagagaaggccgggtctcccaagaaggtgaaggacgagaagggagaggag
gaagacagagaagagaaagtggaggtcaccggcgacgctgacggagagacttccaaggag
gccaaacccgagaaggagtacaaagctcccactgaggagaccaaggaccaggacaaaaag
ctggacttcctggagaaaccagagtctcctaaagcatcagaagagcagggaaccaagaag
gaagagagagatgagaaagaaggaagccttgccaagtctcctaaaccagtggctgagaaa
gggcccgatgaggagaagatggaggaagacgacaagtctgagaagtcctctcaagctgaa
gcgggcgccacctcagagcagaagaactttgacgaggagagcaacgcctcactgagcacc
acagccagagacgagacccgcgacgggttctgccccgaggaagagccctctgccatcccg
gccctccaggagagaactacctcatccttctggcccaaggaccgtgtcatgatcaatcgc
atggacaacatctgcgatgcggtcatcaagggcaagtggcccgccaaccgacgccagttc
ttcgacttcccgggcctgttgcctggataccccggccccatgacgtctgaaagccccatg
ccgaggcggagcctggccgaactgtcgatgaccgctcagaccaacttcagtggcagcgag
gacctcaccctctcgccccaggttaatgaggatgctctaagcatatcattgccgaagcag
cgtcgtcgcaggcggaggaaggtggagatagaggcggagcgtgcggccaagcgcaggaac
ctgatggatatggtggcccagctcagagagtctcacgctgcagagtcccagagccaggcc
atggatcttaccaagggtattctgcaccagcaccacaagtcttcagcgccgtccccggtg
agcttctccagcagcatggtgtcacctgctgccctcaaggcacagatggagcttctgcag
gcggccacaccctccagacacagggccaactgctcattggccgaggctgacctgcccacc
aggaggaggcggggccgcaggaaaaatgtggaggggctggagctgctgttcatgagagga
gccacggaggattcagagaggaccaaagcttcagtggaggggttgcagatgcccccacgt
tcccaccaccacaacattcccagcacctccgcccgtgtcccctctgtcagcgctatggag
gacagggaggctggtaccccctctaacaaagacctgagtgactggctcagacagcacccc
acatacaccatggacatgcctactgcgtacacaccaaagagtgaggagactctcctctcc
tcccagttccccaaacccaagcaaaagagacaccgctgccggaaccccaacaagatcgac
atcaacacgctcaccggagaagagagggttcccgtggtcaaccggagaaatggaagaaag
atgggtggagccatggcccctcccatgaaggatcttcccagatggctcctggagaactca
gattttgccgtcgctccagactggactgacattgtcaagcaatcgggcttcctccctgag
gccatgttcgaccgtctcctaactgggcccttggtgcgtgaggagggcgtccgtcgtcgg
ggaagacgtcccaaatcggagatcgccaaggcaacagcggctgcatcctctgggggcctt
aaccccctgctgataaacagcctgtttggaggcatggacctcaccagcttgcagggccta
cagagcctccagagtctgcagctgcagctcatgggcttccccggcatggggggggctgac
gctaaacacgcctcggccatgctgcctctcatgctgcctggcatggctggtatgggcgtt
ctgcccaacatgtttggcctgggaggcctgttcgcaagcaacctggctgcagcctcccct
gctgcagcctccaatggcaccaacaacgaggacgattcggacgagacatcgaagagagac
gccagggagggtggagaagagcaggatgaggagaaagacgacactggggaggaagaagag
tcgagcaaggctattggggaggctgcggctctgaatgtggctgctgccgctacggcctcc
tccggcatgtcggctaactccatggccttcaatcccttcctgctctccaccatggccccg
gggctcttttccccctacatgttcctgccccctggcctgggaggtctcaccctgcctggc
ttcccccccactgccctgaccgacctgcagagtgccatggctggagccatgggggttgcc
tctggagctcagggccaggagaaggagcccaaccaggttgccctggactgccctgctgcc
gctatcgcagacccagagactgctgatgacagtgactcagctgagagcctggagaagact
gcagagtcgtctgcgctagaagatgagacctccgcattggcaggggaagccgactcaccg
gaagacctggaggaaggagaggatgcccttgaagaggaagagaagtga
DBGET
integrated database retrieval system
