Oncorhynchus mykiss (rainbow trout): 110508833
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Entry
110508833 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110508833
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110508833
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110508833
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
zf_RING_Vps8_fungal
Prok-RING_4
DUF7027
zf-RING_4
PHDvar_NSD
zf-RING_16
PHD
RINGv
VPS18_RING_C
zf-RING-like
zf-C3H2C3
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
110508833
NCBI-ProteinID:
XP_036842936
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All DBs
Position
1:complement(8495925..8580590)
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AA seq
379 aa
AA seq
DB search
MLLSLGMLMLSATQIYTIFTVQLFAFLNLLPVEADISAYTFDNKTGNFDDLPARFGYRLP
SDGLKGFLIGARPENACEPIDPPPIRDNLTGAFIVLIKRFDCNFDIKVLNAQKAGYKSAI
VHNVDSDDLISMGSNDLDILKQIDIPSVFVSEETANSLKEDYTYDKGGHVVLMPDFSLPL
EYYLIPFLITVGICLILIVVFMITKFVQDRHRARRSRLRKDQLKKLPIHKYKKGDVYDVC
AICLDEYEDGDKLRVLPCSHAYHSKCVDPWLTKTKKTCPVCKQKVVPSAGDSDSEDDSGT
EENEVSESTPLLRSLASASGHGFGATSGASRSEPDQESSEYEDTSDDSEEEDVTVETETV
VVQLQEPRPDDHDAPDWLA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctcccttgggatgctgatgctgtctgccacacagatctacaccatcttcacc
gtgcagctcttcgctttcctcaacctgctgcccgttgaggccgacatctctgcctacaca
tttgacaacaagacaggtaattttgatgacctgcctgcacggtttgggtaccggctgccc
agcgatggactcaagggctttctgattggtgcacggcccgaaaatgcctgcgagcccatc
gacccgccccctatccgggacaacctcactggcgccttcatcgtgctcatcaagcgcttc
gactgtaactttgacatcaaggtgcttaatgcccagaaggccgggtacaagtcggccatt
gttcacaacgtggactctgatgacttaatcagcatgggatccaatgatctggatattttg
aagcaaattgacattccatcagtgtttgttagtgaagagactgccaactccctgaaagaa
gactacacatacgacaaggggggtcatgtggtcctcatgccagacttcagcctgcctctg
gaatactacctgatccccttcctcatcaccgtgggaatctgcctcatcctcatcgttgtt
ttcatgatcaccaagtttgtccaggacagacacagggctcggagaagccgtttgcgcaag
gaccaactgaagaaactccccattcacaagtacaagaaaggcgacgtctacgatgtctgc
gccatctgcctcgacgagtatgaggatggagacaagctccgggttcttccctgctcccac
gcttaccacagcaaatgcgtggacccctggctaaccaagaccaagaagacatgtcccgtg
tgcaagcagaaggtggtcccctccgcaggcgactcggactcggaggacgacagcgggacc
gaggagaacgaggtgtctgagagcactccgctgctgcgctccctggcctccgccagcggc
cacggcttcggcgccacgtcaggggcctctcgctccgagcccgatcaggagtcctcggag
tacgaagacaccagcgacgacagcgaggaggaggacgtcaccgtggagactgagacggtg
gtggtccagctgcaggagcctcgtcccgatgaccatgacgcgcctgattggttggcctga
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