Oncorhynchus mykiss (rainbow trout): 110508841
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Entry
110508841 CDS
T07259
Name
(RefSeq) histone deacetylase complex subunit SAP130 isoform X1
KO
K19192
histone deacetylase complex subunit SAP130
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110508841
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
110508841
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP130_C
Motif
Other DBs
NCBI-GeneID:
110508841
NCBI-ProteinID:
XP_036821864
Ensembl:
ENSOMYG00000039947
LinkDB
All DBs
Position
28:complement(27964886..27984136)
Genome browser
AA seq
1033 aa
AA seq
DB search
MSSQQYSRPGIPPGMGKKQIPGGNTAMVASSQPNTTGGTDDSSRDPHPDHSPYDRPSGGS
GAPGFRDDKQETVVVRPYPQVHGPSQGHHPTLPQHLPLQQGMPVTVSAPPPHIPQGLPLA
FTEGPIKVQSSLKSPMPSRVIAPAPANIQGHISLPPKVPSHITVTMESTVPPTPGIPVAT
ISGQQAWRFQGNPSNLHHHVQIIRSNGPPLQLGSTGIPQHTFTSHLPRGAAAAAVMSSSK
GPTVLRPATGPGSGTGPPTVQHIIHQPIQSRPIVTTSTAVLPTVVAPVTATRPQSPVVSS
ATHSAEMVHGRPGLTVHPPPATLSIQRPPQSRETPTRITLPSHPAIGGQKPQLYNTMAQK
PIFSNVTPVAAATVAPILATNTAPSPSTTGSGPHPNSNIVTMAMPSHSSHATAVTTSNIP
VAKVVPQPIAHTSPRIQPEYPGERGNLIPISGPRSSPNPITMEARSDNRQPVPVQFQYFL
PTYPSSSYPLTHTYTPITSSVSTIRQYPVTPQAPSGTAMQTQASVGVASAVHLNPMQLMT
VDRIAQINTQNIQPAAMATQGIKSTNISTQGLHTATGQITAQNIQPVPINQQQPAIENKT
SVVLADGSTLVANPIGQTFGSSQPPTCVGQTHPQNTGPGAPTLLSSPRPSILRKKPANEG
SAVRKNLIPEATSPRIDGGIRPASGMKHKADLHVSLAPPLTSSSMEVLPSHQINEQQPSQ
PIQTLLSVSAPPHSQPGPAMSAITPPISSMANVVVPPTQATASSTAACGISSTLPELKIK
QEVEPMDTSKAGPPMPHCGAPMLSMIPGGDVILGASPRKKPRKQQHIISTEESEMMETNS
TDEEKVLARPHSMRPEKRKSPPKEYIDEEGVRYVPTRARPPVTLLRHYRNPWKAAYHHFQ
RYSDIRVKEEKKGTLQDVANQKGVVCRAQGWKMHLCAAQLMQLTSLEHDVYSRLTTLQEG
LIPKKKAGSDDDMHRINELIQGNMQRCKLVMDQITEARDAMMKVLDHKEKVMKLINKNGG
AKKVNKLKRKDKA
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgcaacaatattcacgaccgggaataccccctggtatgggaaaaaaacagatt
cccggaggaaacactgcaatggtggctagtagtcaaccaaacacaacaggtgggacagac
gatagcagccgtgaccctcacccagaccacagtccttatgaccgccccagtggtggtagt
ggagcaccggggtttagagatgacaagcaggagacagtggtggtccggccttacccccag
gtccacggcccctcccagggtcaccacccaacactacctcagcacctgcccctccagcag
ggcatgcccgtcacagtgtcagctcctccaccgcacattccccagggcctgcctctggcc
ttcactgaaggacctataaaggtgcagtcatctctgaagtcgcccatgcccagtcgagtg
attgccccagcaccagccaacatccagggccacatctccctgccacccaaggtgccaagc
cacatcactgtaaccatggagagcactgtgcctccgacccccggcatccctgtagcaact
atcagtggccaacaggcgtggcgtttccagggcaaccccagtaacctgcaccatcacgtg
cagatcattcgcagcaacggcccgcccttgcagctcggctccactggcattccccagcac
acctttacctcccatctaccccgaggagctgctgcagctgctgtgatgtccagttccaaa
ggacccaccgtactgagacctgctacaggccctggtagtggtactggcccacctactgtc
cagcacatcatccaccagcctatccagtcccggccaatagtaacaacgtccacggctgtg
ttgcccacggtggttgccccggtaactgccacacggcctcagtccccagtggttagctca
gccacgcactccgccgagatggttcatgggcgtccagggctgaccgttcacccccctcca
gccactctgagcatccagcgtcctccccaatctcgggagacccccacacgcatcaccctg
ccctctcaccctgccattgggggtcagaaaccccagttgtacaacaccatggcacagaag
cccatattcagcaatgttactcctgttgctgcagcaactgttgcccccatattagccacc
aatactgctccatcgcctagcactacaggctcaggaccccaccccaacagtaacatcgtc
accatggcgatgccctctcattcctcccacgccacagcagtcaccacgtccaacatcccc
gtggctaaagtggttccccagccaatagcccacacctcgcccaggatccaaccggagtac
cctggagagaggggcaacctgatccccatctcaggcccccgctcctcccccaaccccatc
accatggaggcccgcagtgacaacaggcaaccggtgccagtgcagtttcagtacttcctg
cctacctacccttcttcgtcgtaccctctgacacacacctacacccccatcaccagctct
gtttcaaccatccgacagtacccagtaacccctcaggcccccagcggcacggccatgcag
acccaggccagtgtgggcgtagcgtcggcggtgcacctcaaccccatgcagctgatgacg
gtggaccgtatcgctcagatcaacacgcagaacatccagcccgccgccatggccacgcag
ggcatcaagtcaaccaacatcagcacccagggcctgcacactgccaccggtcagatcact
gcgcaaaacattcaacctgtgcccatcaaccaacagcagccagccattgagaacaagacc
tcagttgtgttagcagacggctccactctggtagccaaccccattggccagacgttcggc
agcagccagcctcccacctgcgttgggcagacacacccccagaacactgggcctggtgcc
cccaccctgctgtcctccccccggcctagcatcctgcgcaagaagcctgccaatgaaggg
tctgctgtgaggaagaacctgatcccagaggccaccagccccaggatagatggaggcatc
aggcctgcatcaggtatgaagcacaaggctgatctccacgtgtccctggctcccccgttg
acatcgtcctccatggaagtgctgcccagccatcagatcaatgagcagcagccctctcag
ccaatccagaccctcctctcagtgtctgcacccccacactcccagcctggccctgccatg
tccgccataactccaccaatctcgtctatggccaacgtggtggttccgcctacacaggca
acggccagtagcacagcggcatgtggaataagctccaccctccctgagctcaagataaag
caggaagtggagcctatggatacctccaaagcaggtccccctatgccccattgcggtgcc
cccatgttgtctatgatacctggtggggacgtgatcctcggggcctcacccaggaagaag
ccccggaagcagcagcacatcatctccacggaggagagcgagatgatggagaccaacagc
acagatgaggagaaggtcctggccagaccacacagcatgaggcccgagaaacgcaagtcg
ccccccaaggagtacatagatgaggagggtgttcgttatgtccccacccgtgctcgcccc
ccggtcaccctcctccgccactacaggaacccctggaaggctgcctaccaccacttccag
agatacagtgacattcgggtcaaagaggagaagaagggcaccctgcaggatgtagccaat
cagaagggggtggtgtgcagagcacagggctggaagatgcacctgtgtgcagcacagctc
atgcagctgactagtctggagcatgacgtgtacagccgcctcactaccctccaagagggc
ctgatcccaaagaagaaggccgggtcggatgatgacatgcaccgtatcaacgagctcata
cagggtaacatgcagcgctgtaagctggtgatggaccagatcactgaagctagagatgcc
atgatgaaggtgctggaccacaaggagaaagtcatgaagttaatcaacaagaacggcgga
gcgaagaaagtcaacaagctgaagcgcaaggacaaagcctag
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