Oncorhynchus mykiss (rainbow trout): 110508860 Help Entry 110508860         CDS       T07259                                  Name (RefSeq) nucleoprotein TPR isoform X1   KO K09291   nucleoprotein TPR Organism omy  Oncorhynchus mykiss (rainbow trout) Pathway omy03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:omy00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     110508860  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:omy03019]     110508860 Messenger RNA biogenesis [BR:omy03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      110508860 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TPR_MLP1_2 GAS Fez1 ERM_helical Apo-CIII Motif Other DBs NCBI-GeneID:  110508860 NCBI-ProteinID:  XP_021445403 Ensembl:  ENSOMYG00000045515 LinkDB All DBs Position 28:complement(28817604..28840725) Genome browser AA seq 2572 aa AA seqDB search MAAVLLQVLERTELNKLPKAAQNKLEKFLTDQKNEIESLKTQHERFKADCEQQYFDVEKR LAESQEQIVSHTRNYQTLKEENTKLIEELNNLKGVDVDSSEEKESQQPSKAKYEIEAERR ELARLLEKRTQDVENLTEDVKRLNDKLVETNTAKIDLQLKLDEIQSSEVSIQHREKRMEQ EKELLQNQNTWLNSELKTKTEELLSVSRDKGKEILELKCSFECKKDEVTRLQTQVTNLKK SSENLQKRVEDLMTKLKEAKDHHSTMEEKYRNEQNAHIKLSNLYKGSASDAESKNEELNR AVEELHKLVKESGDARQNMEKKLADMEGSKSKQEAELKEKFKKMELENANLRASDKKRSM PVLTEEELDSMCPTAAAVAKIVKPGMKFMELYNAFVDIQDQLLVEKQENRRVTRVLDEIV QEVEEKAPILKRQREEYESMQRSMNSLCAKLEQARTEIHSLQKETDEAKKHCSNLEKDNQ HSERELEDMSQQVRVLLVELEEARGNPVVREETMNLSSSSEIINPRQVSFRSVEELQRQN QSMLARLRELGEKMEREQTEAKSARVTQLEQQLEKVQKELEIIKEQRNQQKQLADSNGRQ RDMYRILLSQSTGFNLPPQGPTQEAAPQMYTPSRPSFPPPTRSTPMRASAAESSQTTQAK AALKQLNDSFTTYKNEKAVNDRMLNEQNEKLQEQLSAVRSQKAKLSTQLEFASKRYEMLQ ENVNGYRREIAALHDKSQKMAATAQKHEQIIHTMTQDLRAANEKLALAEVRGENMKKERD MLKSAESRLNQEKEAMMAEQRNQNLLLTNLKSIQLTMERTETETRQRLNSQIERLERELT QFKKKLAEEVEQRHMLGRNQDAQLLEAKKQLEAQCALHQKTKELLKNAEQQANLLKQQLS HAESQNQGSGLGQGQSLGQTNPRAPIRAPLRAPSQTQSQEAQAKLQSELEEVRGRLQQAE KQISDLQERLQNASTNVEQYRTVVLSLEESLSKEKQARSPVETRLKEAQEFQRGLEKKLV EAEKEKQELREEKRKAMDIVEKQVNELKRTMKNLQSELQEAEERKAAAITQEQKAMQDSL QQGKLAAEAQNKYERELMLHAADVEALQAVKKQGLQGNQSRKQLEDKAKQTTTQLQEART NWNQLEKKLKEDLSKQQKRADELQKQNGLLHQQMESLGAKMAATVQQQQQASRESSLNLS FSEEGKSQEQILEILRFVRREKEIAETQFEVAEVETLRYKQQVEHQDRELKELQESLNAE REKLQLTAKTMAQHDEKMKRMENLNVLVETNKMLKEERERLEQELHQTQAKVRKLEADIT PLQDSNSELSEKNGMLQAEKKLLEEDIKRWKARTQQLVSQQKDTDQEENKKLHSEREAHL KRIQQLSEETGRLKAEVARTHASVITAQSQAQNLKENLGKVTTERDAKHLDIQEKCKTIT QVKKIGRRYKTQYEELKVQHDKLVAEAAAKPAQEEVLQAVQQAQQQAQQAQQASAQEIQS LKDSLSQAETKVKDLEGQLENVQETVNERNTEMGRLKQELTRLQEQSTQAQGTQSEVTRL KQELTRLQEQSSQGTQGEVTRLKQELTRLQEQSTQAQGTQGEVTRLKQELTRLQEQSTQA QGTQGEVTRLKQELARLQEQFTQAQGTQGEVTRLKQELTRLQEQFTQAQGTQGEVTRLKQ ELTRLQEQSTQAQGTQGEVTRLKQELTRLQEQSAQGTQGEVTRLKQELQEKTAQEESLRQ QIADKEEKTKKVFMGAKQKINQLNIAKEHLTKEVEELKQQREEQEVRLSAIKSQYEGRLH RQDREIRELRDHRDEQPQRDESQDQGKNKTQEQQQRAPDQRQINQRTSQAADRGSGSSGS SEQPPTANIKPTTVSGGAPSKPSPIPGNKSTPRASIRPMVPITMPTPTATVMPHTQSESQ EVLQSSEGGTPVEHVSVFGSTSGSVRSTSPSVQNITHSQFQPISSQATAFVQPTQQQQAP PTAELASQETEAGPSGQVERPSTSTAVFGSAIATGGSAGPKRAREVELEARAESVDMALE NPDEPPIPKKLRIIQRVGLEEENEEGTDGEAEGSGENQETPDGSQELPDVSFPVLGEVEE EDDGVSQSVPSDHQVTPQPSDTQDSSEERQPDVIIIDTDSSSREEEEEEAEQYEEEVEEE KDDDDDEDQGMGREESNEGSGDANEPFEGDETGPETSEPASENEESMGAIDSTSQKQADS QSGEGSSSTTESFPMAMSDPPKELLQPTASTTSTFSFSTSPFSPSSSLRLPQSVPRRPPH PLPPRLYIQPPGPELGLGPPPTQRLSAPIRRQSVGRGPQLTPGIGNMQHFFDDDDRMVPS TPTLVVPHRTDGFAEAIHSPQVAGVPRFRFGPPEDMPQASSSHSDLGQLASQGGLGMYES PLFLAAHDEESGGRSVPTTPLQVAAPVTLFNESHPSDAQDMASQSVPMVTTSTSHHGLAV PGGEAIPGDDGDEVFMEADSEGRSGEASMDSQAEMDSVQPSDDASLPSTSQEPTSSSADT SSSVQPKPSGRPLAQHSLPMRTANRGRALIRRGGMGFLRAGRGPFGRGNLPR NT seq 7719 nt NT seq  +upstreamnt  +downstreamnt atggcggcagttctgctccaagttttggagcgtacagagcttaataaactccctaaagct gctcaaaacaaattagaaaagttccttactgaccagaagaatgaaatcgaatccctcaaa acgcagcacgagcggttcaaagcggactgtgagcagcaatactttgacgttgagaagaga ttggcagagagtcaagagcagattgtgtctcacacccggaattaccagactctcaaagag gagaataccaaactcatcgaagagctgaacaatctgaaaggtgtggatgtggactcgtca gaggagaaggaatcacagcagccgagcaaagccaaatatgagattgaggccgaaaggcgg gaactggctcgtctgcttgaaaagagaactcaagatgtggaaaatctcaccgaggatgtc aagcggctcaatgacaagctggtggagaccaacacagccaaaatagatctacagctcaaa ctggatgagatccaatcttctgaggtctccattcagcaccgtgagaaacgtatggagcag gagaaggagctactgcagaatcagaacacgtggctgaactctgaactgaagaccaagaca gaggagctgctatcagtctccagggacaagggcaaggagatcctggagctcaagtgcagc tttgagtgcaagaaagatgaggtcacaagacttcaaacccaagtcaccaatctgaagaag agcagtgagaacctgcagaagcgagtggaggacctgatgacaaaactgaaagaggctaaa gaccatcatagcaccatggaggagaagtaccgcaatgaacagaatgcccacatcaagctc tccaacttgtacaaggggtcagcgtcagatgcagagtccaagaacgaggagttgaacagg gccgtggaggagctgcacaagctggtgaaggagtctggtgatgcgagacagaacatggag aagaagctggcagatatggaggggtcaaagagcaaacaggaggctgagctgaaggagaag tttaagaagatggagctggagaacgccaacctgcgtgcctcagataagaaaagaagcatg ccagtgctcacagaggaagagttggactccatgtgtccgaccgcagctgctgtggccaag attgtcaagcctggaatgaagttcatggagctgtacaacgcattcgtggacatccaggac cagttgctcgtggagaagcaggagaaccggcgtgtgacgcgcgtgctggacgagatcgtg caggaggtggaggagaaggcgcctatcctaaagcgccagcgggaggagtatgagagcatg cagaggtccatgaacagcctctgtgccaaactggaacaggccaggacggagatccacagc ctgcagaaagagacagatgaggccaaaaagcactgctccaacctggagaaggacaaccag cactctgagagagagctggaggacatgtcccagcaggtgcgcgtcctgctagtggagctg gaggaggcgcgtggcaacccggtggtccgcgaggagacgatgaacctgagcagcagctct gagatcatcaacccacgccaggtttccttccgcagtgtggaggagctgcagcggcaaaac cagagcatgctggcacgtctccgggagctgggggagaagatggagagagagcagactgag gccaagtctgcacgtgtgacccagctggaacagcagctagagaaggtccagaaggagctg gagattataaaggagcagagaaaccagcaaaagcagctggctgactccaacggccgccag agagacatgtaccgcatcctgctgtcccagagcaccggcttcaacctcccaccacaaggt cctacacaggaggcagccccccagatgtacacccccagccggccctccttcccccctccc accaggtccacccccatgagggcttcagccgctgagtcttcccagaccacccaggccaag gctgctctcaaacagttgaacgactccttcaccacatacaagaatgagaaggcggtgaac gacaggatgctgaacgagcagaacgagaagctacaggagcagctgtctgcggtccgctcc cagaaggccaagctctccacacagctggagttcgcctccaagagatacgagatgctgcag gagaatgtaaacggctacaggcgggagatcgctgctctgcacgataagagccagaagatg gccgccacggctcagaaacatgagcagatcatccacaccatgacccaggatctccgggcg gccaatgagaagctggccttggcagaggtgcgtggtgagaacatgaagaaagagagagac atgctgaagtcagcagagtccagactgaaccaggagaaggaagccatgatggctgagcag cgcaaccagaacctcctgctcaccaacctcaagtcaatccagctgacgatggagcgtaca gagaccgagaccaggcagcgtctgaacagccagatagagagactggagagagagctcacc cagtttaagaagaaactggctgaggaggtggagcagaggcacatgctgggccgtaaccaa gacgctcaactgctggaggccaagaagcagctagaggcccagtgtgccctgcaccagaag accaaggagctgttgaagaatgctgagcagcaggctaaccttctgaaacaacagctcagc catgctgaaagccagaaccagggttcaggtctgggccagggtcagagcctgggccagact aacccccgggcacccatcagagcaccgttaagagctccatctcagacccagtcccaggag gcccaggccaagctccagtcagaactagaggaggtgcgtgggcgtttgcagcaggccgag aagcagatcagcgatctgcaggagcgcctgcagaacgcgagcactaacgtggagcagtac cgcaccgtagtgctcagcctggaggagtccctcagcaaagagaaacaggctcgttctcct gtggagactcgtctaaaggaggcccaggagttccagcgtgggctggagaagaaactggtg gaggctgagaaggagaaacaggagctccgtgaggagaagaggaaggccatggatattgtg gagaaacaggtgaatgagctgaagaggaccatgaaaaacttgcagtcagagctgcaggag gcggaggagaggaaggctgcagccatcacccaggaacagaaggccatgcaggacagcctg cagcagggcaagctggcagcggaggcccagaacaagtacgagcgggagctgatgctgcat gcggctgatgtggaggcgctacaggcggtcaagaaacaaggcctgcaggggaaccagagc aggaagcagctggaggacaaggccaaacagaccaccacccagctacaggaggctcgcacc aactggaaccagctggagaagaaactcaaggaggacctgtccaagcagcagaagcgggca gacgagctgcagaagcagaatggcctgctgcaccagcagatggagagcctgggagccaaa atggccgccacagtacagcagcagcaacaggctagtagggagagcagcctcaacctgtcc ttcagcgaagagggcaagtcccaggaacagatcctggagatcctcaggtttgtgcgtcgt gagaaggagattgcagagacacagtttgaggtggccgaggttgagacactgcgctacaaa caacaggttgaacaccaggatcgagagctgaaggaactacaagagagcctcaacgctgag agagagaaactacagctgacagcaaagaccatggcccagcacgatgagaaaatgaagagg atggagaacttaaacgtgctggtggagaccaacaagatgctgaaggaggagagggagcga ctggaacaggagctgcaccaaacccaggctaaagtgcgtaagctggaggcggacatcact cccctgcaggactccaactctgagctgagtgagaagaatggcatgctgcaggctgagaag aaactgttggaagaggacatcaaacgctggaaggcccgcacacagcaactggtgagccag cagaaggacacagaccaggaggagaacaagaagctgcactctgagagagaggcccacctc aaacgcatccagcagctctctgaggagactgggagactgaaggctgaggtggccaggacc catgcgtcggttatcacagcccagagccaggcgcagaacctgaaggagaatctgggcaag gtgaccactgagagggatgcgaagcacctggacatccaggagaagtgcaagaccatcacg caggtcaagaaaatcggacgacgctacaagacgcagtatgaggagctcaaagtgcagcac gacaagctggtggcggaggcagcagccaagccagcccaggaggaggtgctgcaggctgtg caacaggcccagcagcaggctcaacaggcccagcaggcctctgcccaagagatccagagc ctgaaggactccctcagccaggctgagaccaaggtcaaagacctggagggacaactggaa aacgtacaggagacggtgaatgagcgcaacacagagatggggcggctgaaacaggagctg acccggctccaggaacagtctacacaggcccaggggacacagagtgaagtgacccggctg aaacaggagctgacccggctccaggaacagtcttcccaggggacccagggtgaagtgacc cggctgaaacaggagctgactcggctccaggaacagtctacccaggcccaggggacccag ggtgaagtgacccgactgaaacaggagctgacccggctccaggaacagtctacccaggcc caggggacccaaggtgaagtgacccggctgaaacaggagttggcccggctccaggaacag tttacccaggcccaggggacccagggtgaagtgacccggctgaaacaggagctgacccgg ctccaagaacagtttacccaggcccaggggacccagggtgaagtgacccggctgaaacag gagctgacccggctccaggaacagtctacccaggcccaggggacccagggtgaagtgacc cggctgaaacaggagctgacccggctccaggaacagtctgcccaggggacccagggtgaa gtgacccggctgaaacaggagctgcaggagaagactgctcaggaggagtcgctacggcaa cagattgccgacaaggaggagaagaccaagaaggtcttcatgggcgccaagcagaagatc aaccaactcaacattgcgaaggagcatctgaccaaggaggtggaggagctgaagcagcag cgggaggagcaggaggtgcgtctgagtgctatcaagtcccagtatgagggccgtctgcac cgacaggaccgagagatcagggagctccgagaccaccgtgacgaacaacctcagagagac gagtcccaggaccaggggaaaaataagacccaggagcagcagcagagagctccagatcag aggcagatcaaccagaggacttcccaagctgcagacaggggaagtggttcttccggctct tcagagcagccccccactgccaacatcaaacccaccacggtgtcgggcggtgcccccagt aaaccttcccccatccccgggaacaagtccacccccagggccagcatccgacccatggtg cccataaccatgcccacccccacggccactgtcatgccccatacacagtctgaaagccag gaagtgctgcagtcctctgagggtggaacccctgtggaacacgtgtctgtgttcggcagc accagcggctcggtccgctccaccagccctagcgtccagaacatcacgcactctcagttt cagccaatcagcagccaggccaccgccttcgtccagccaacccagcaacagcaggccccg cccaccgctgagctggccagtcaggagacagaggcgggccctagtggtcaagtggagagg ccctccacttctacggccgtatttggctccgctattgctacagggggctctgctgggcca aagcgtgcacgcgaggtggagctggaggctcgggcagagagcgtcgacatggccctggag aacccagacgaaccacccatccccaaaaagctccgtatcatccagagagtgggactggag gaggagaatgaagagggcactgatggagaggctgaggggtcaggggagaaccaggagact ccagatggcagccaggaactaccagacgtgtcctttcctgtactgggagaggtggaggaa gaggatgacggggtgtcccagtctgtcccctcagaccaccaggtgaccccccaaccctcg gacacccaggactccagcgaagagcgccagcctgacgtcatcatcatcgacacagacagc tccagtcgagaagaagaggaggaagaggcagagcagtatgaggaagaggtggaggaagag aaggatgatgatgatgacgaggaccaggggatgggaagagaggagagcaacgaggggagc ggagacgccaacgagccatttgaaggagacgagacgggccctgagacctcggagcctgcc tcggagaacgaggagagcatgggagctatagactccacctcccagaaacaggctgactca caaagcggtgaggggagcagcagtaccaccgaatccttccccatggccatgtccgacccc cccaaagaactactacaacctaccgctagtactaccagcactttctccttctctacctcc cccttctccccctcctccagcctgcgcctgccccagtctgtcccccgccgacccccacac cccctgcccccacgcctctacatccagccccctggccctgagctgggcctgggacctcca cccacacagaggctgtctgcgccaatccgccggcagtctgtaggcagaggaccccagcta acgcctgggataggcaacatgcaacacttctttgatgacgatgacaggatggtccccagt acgcccacgctggtggttccccaccggactgatggctttgctgaggccatccattctcca caggtagcaggagttcctaggttcaggtttggtcctcctgaagacatgcctcaggccagc tcgtcccactctgacctcggacagctcgcctcacaaggaggtctggggatgtacgagagt ccactgttcctggccgctcacgacgaggagtctggagggaggagtgttcccaccacgccc ctgcaggttgctgccccagtgacgctcttcaatgaatcccacccctctgatgcccaggac atggcatcccagtctgttcccatggtgacgacatccacgagccaccacgggctggcagtc cccggcggagaggccatcccaggagatgacggtgacgaggtgttcatggaggcagatagt gaaggtaggagtggtgaagcgtccatggatagccaggctgagatggactctgtccagccg tcagacgatgccagtctgccctccacaagccaggagcccacctccagctctgccgacacc agcagtagtgtgcagcccaagccctccggtcgccccttggcccagcactctctgcccatg agaacagccaacaggggcagggcgctcatccgcagaggaggtatgggcttccttcgagca ggaagaggccccttcggcagaggaaacctaccccgctaa

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