Oncorhynchus mykiss (rainbow trout): 110508868 Help Entry 110508868         CDS       T07259                                  Name (RefSeq) roquin-1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism omy  Oncorhynchus mykiss (rainbow trout) Brite KEGG Orthology (KO) [BR:omy00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:omy03000]     110508868    04121 Ubiquitin system [BR:omy04121]     110508868 Transcription factors [BR:omy03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     110508868 Ubiquitin system [BR:omy04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     110508868 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-C3HC4 zf-CCCH zf-C3HC4_2 zf-CCCH_4 zf-CCCH_UNK zf_CCCH_4 Prok-RING_4 FYVE NS3_helicase_C Baculo_IE-1 RING_XB3-XBAT31 zf-RING_6 Motif Other DBs NCBI-GeneID:  110508868 NCBI-ProteinID:  XP_021445412 Ensembl:  ENSOMYG00000046090 LinkDB All DBs Position 28:complement(29045566..29073745) Genome browser AA seq 1100 aa AA seqDB search MPVQAPQWTEFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAIATD IEQLPVNTALLQLVGGQVPKVQPVALITSPEDSQHYEEARQCVDELALYLKPLSNNRGVG LSNTAQSMLSRPMQRKLVTLVHCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGLALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNQLRPHLELL ANIDPSPDAPPPTWEQLEKGLVAVKTVVHGLVDFIQNHSKKGADPQQPPQHSKYKTYMCR DMKQKGGCPRGASCTFAHSQEELEKYRKMNKRLAARLPGSSGLLSDDCLPLDMGVTRNTS PLTNGSAGHPMPQLITRGTDAVTYDLLCKPKIDGGSSSSPGSPPDSLDSGPKQGFLQPPL AMGHPRGSGDPMPKQMPVGVMPRGPQMYPQQLPDMYYSDSHPLPSASQYEPSQYPQGYPY QQPPQYSTQRYIRNLPTPSEPAGPPYQDPYPGYGPPERPYPAPHSGTPYSYLPHYDTRGR HGPYPGPQPYPSQRDDMPPNHHYQQEQAARGRYPPEGYYPTGAQPQSMRSNVREQYRRSS QPSLDYLHHRRKELMAQLEERKVISPPPFAASPTLPHAFPSDYPPEYGEESSKAFGKCRE PDYAGQYSPWSCDTIGSYIVTKDAKPKDIMTPGAMEMMNVDGKGLRGEPSMEVQARRGAE VKDDDPIIPFGPQPTVSRFGAISRTSKTGYQTTGPVQAMASAQGPKHMAAEFSYGHHGGW GGASYPSHQTGFSSQGHFSEKLSMPAQDREHLKIELQQVNQQITQQTHTHGMEREVSALA AQPSQPCQNQGQQGKWPGPVGVSSNAALVSSEQLSMELHQVEREIGKRTRRIDMDSQVAH EVQYKMKAAQNGQQDHKTQLEEIALALGEVSNGSSGLGQDGGVGGAMLSLTNKASSLSLC SEPGPGVSELQKNGMVHSCS NT seq 3303 nt NT seq  +upstreamnt  +downstreamnt atgcctgtgcaagccccacaatggacggagttcctgctgtgtcccatctgcacgcagacg ttcgaggagacggtgcggcggcccatctcgctgggctgtggccacaccgtctgcaagatg tgcctgaacaagctccaccgcaaggcctgccccttcgaccagacagccatcgccaccgac atcgagcagctgccggtaaacacagccctactgcagcttgtggggggacaggttcccaag gttcagccggtggccctgatcaccagcccagaggactcgcagcactatgaggaggctaga cagtgtgtagatgagctggccctctacctcaaacccctcagcaacaacagaggggtgggt ctaagcaacacagcccagagcatgctgagtcggcccatgcagaggaagctggtgaccctg gtccactgtcagctggtggaggaggagggccgtgtgcgggccatgagggcagccaggtct ctgggggagcgcacggtcacagagctcatcctacaacaccagaacccccagcaattgtca tccaatttgtgggccgccgtccgggcccggggatgccagttcttgggcccagccatgcag gaggaggctctgaagctggtgctgctggctctggaggatggcttggccctgtccaggaag gttctggtgctgtttgtggtccagaggttagagccacgcttcccccaggcctccaagacc agcataggccatgtggtgcagctcctctacagggcctcctgcttcaaggtgaccaagcga gacgaggactcgtccctgatgcagctgaaagaggagttcaggacgtatgaggcactgcgg cgcgaacacgattcccagattgtgcagatcgccatggagggtggcctccgcatcgctccc gaccagtggtcctccctgctctatggggaccagtcccacaagtcccacatgcagtccatc attgacaagttgcaaacgccagcatcgtttgcccagagcgttcaggagctgaccatcgcc ttgcagaggacgggcgaccccgccaaccttaatcagctccgaccacatctggaactactg gccaacatcgaccctagccccgacgccccccctcccacgtgggagcagctggagaagggt ctggtggcggtgaagaccgtggtccacggcctggtggacttcatccagaaccacagcaag aagggagccgacccacaacagcctccccagcacagtaaatacaagacgtacatgtgtcgg gacatgaagcagaaggggggctgtccccgaggagccagctgtaccttcgcccactctcag gaggagctggagaagtaccgtaagatgaacaagcgtttggcagctcgcctccctggctcc tccggcctgctgtcggatgactgtctccctctggacatgggggtgacccggaacacctcg ccccttaccaacggctcagctggacaccccatgccccagctcatcacccgcggcacggac gccgtgacctacgacctgttgtgcaagcccaagatagacggcgggagcagcagctccccg ggatcgccccctgactctctggattcagggcccaaacaagggttccttcagcctcccctt gccatgggccaccccagggggtcaggcgaccccatgcccaaacagatgcccgtaggtgtg atgccccgggggcctcagatgtacccccagcagctgcctgacatgtactactccgactca cacccactgccttccgcctcccagtacgagccttcgcagtacccccaaggatacccctac cagcagcccccccagtactccacccagcgctacatccgaaacctccctacccccagcgag cccgctggacccccctaccaggacccctatcccggctatggccctcccgagcgcccttac ccagctccccactccggcaccccctactcctaccttccccactatgacacccggggccgc cacggcccttaccctggcccccagccatacccctcgcagagggacgacatgccccctaac caccactaccaacaggagcaggcggccagggggaggtaccccccagaggggtactaccca actggggcccagcctcaatccatgaggtccaacgtcagggagcagtacagacgctcctcc cagcccagcctggactacctgcaccatcgccgcaaggagctgatggcccaactagaagag cggaaggtcatctccccgccaccctttgctgcctcccccacccttccccatgcctttcct agtgactaccccccagagtatggggaggaaagctccaaagcctttgggaagtgcagggag ccggactacgccggccagtattctccctggtcctgtgacactatcggctcctatattgtc accaaggacgccaagcccaaagacatcatgacgcccggcgccatggagatgatgaatgtg gatggtaaaggtctacggggggagccctccatggaggtccaggccaggcggggggcggag gtcaaagacgacgaccccatcatccccttcggcccccagcccaccgtgtcgcgcttcggg gccatctcacgcacctccaagacaggctaccagacgacaggccccgtgcaggccatggcc tccgcccagggacccaagcacatggccgcggagttttcctatgggcaccacggaggctgg ggcggcgcctcctacccctcccaccagactggcttctcctctcagggacacttcagtgaa aagctgtctatgccagctcaggacagagagcatctgaagattgagctccaacaggtcaac cagcagatcacccaacagacccatacccacggcatggagagggaggtcagtgccctggcg gcccagccctcccaaccatgtcagaaccagggccagcaggggaagtggcccggtccagtg ggggtttccagcaatgctgccttggtgtctagcgagcagctcagcatggagctgcaccag gttgagagggagattggcaagaggacccgccggatagacatggacagtcaggtggctcat gaagtccagtacaagatgaaggctgcacagaatggccagcaggaccacaagacccagctg gaggagattgctctggccctcggtgaggtatctaatggctccagcggtctaggtcaggac ggtggtgtgggcggagccatgttgtcactgaccaataaagcgtcttcgctcagcctgtgt tctgagccggggcccggggtctcagagctgcagaagaatggtatggtccattcctgctcc tag

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