Oncorhynchus mykiss (rainbow trout): 110508920
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Entry
110508920 CDS
T07259
Symbol
kcnn1a
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2 isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110508920 (kcnn1a)
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
110508920 (kcnn1a)
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
DUF7310
DALR_1
Med4
IRK
Motif
Other DBs
NCBI-GeneID:
110508920
NCBI-ProteinID:
XP_036822033
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All DBs
Position
28:30534338..30592397
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AA seq
964 aa
AA seq
DB search
MRHRYAGAVYQHQIPDEEQGSAQSRDPNPVSPVFSLPPPPPSFRERSTTTSHYQNHELPC
LSQPSLRGIHACQPQHGEPPPLTNYDIAQRPSHRVCEPDGQPAHLKQNLWAAVGSQPQSE
QPVSQSCHCSFSEKANLSHQRQPLTHPPQPSLSLPPPPTSSSLLFLQESNRGEHFQSSAN
YQQASIVEHCRGGEGGGGYRDQKQLLQQHCQRLRHRDPSPEAIRANSQKGRTVNVCESIE
ANRRAFESQAQDLQQLQQQPLLRAQQQLLVGSSLPINYCANGSGEVCRNNQASLLQQHQQ
QQDALGLCPQRPQHCDQDCNKPGRTNQANQSHQHCRDSRVNPPTQPYGGNSSATGSSSKS
SPNYGSSYHLWPESPHKGEERILIDHYQATTEQKKLSHAGSKPCLSESSGRLPQIAMNTC
KYNGGVVRPLGSLASSRRNLAELDSETQPLQTLHSSGLEVVVSKGNGEDPSKASNESLVR
DGNGAPVKKNKDIGYRLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYGKES
SYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFIVLELLVC
AIHPIPGHYRFTWTARIAFTYTPSTANADVDIILSIPMFLRLYLIGRVMLLHSKLFTDAS
SRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDTQEVTSN
FLGAMWLISITFLSIGYGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEK
HVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIHQAQK
LRSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGMLEEKLDSVTGSL
QALPCLISQAINQQQQEFLDGFLHRFRPTSLGSERSERSVRSWTSTARRRRSPSTAPHTS
SDSG
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcggcatcgatacgcgggagctgtctatcagcaccaaatccccgacgaagagcaaggc
agcgcgcagagccgagacccaaacccagtctctccagttttcagtctgccgccccctcct
ccgtctttcagagagcgttcaactaccacctcacactaccagaaccacgaactgccttgt
ctgagtcaaccctctctgagaggtatccatgcctgtcagccgcagcacggcgaaccccca
cctctgacaaactacgacattgcccagcgaccgtcacaccgggtctgtgaacccgacggg
cagccagcgcacctgaagcagaacctttgggccgcagtcggctcgcagccgcagtcggaa
cagcctgttagtcagagctgccactgcagtttttccgagaaggcgaacctttctcaccag
cgccagcccctcactcacccgccgcagccctccctgtctttgccgccgccgccaacgtcg
tcctctttgctgtttttgcaggaatctaatcgcggggaacatttccaaagcagtgccaat
taccaacaggcgagcatcgtggaacactgcaggggaggagaaggaggaggagggtaccga
gaccagaagcagttgttgcagcaacactgtcaaagactccgacacagggacccctcccct
gaagcaatccgagcaaactcgcagaaagggcgcacagtaaatgtatgtgagtcaatcgag
gctaatcggcgagcattcgagtcccaggctcaggacctgcagcagctacagcaacagcca
ctattgcgagctcaacaacagctactggtggggagcagcttgcctatcaactactgcgcc
aacggctcaggagaggtatgtaggaataaccaggcatcactgctgcaacagcatcagcag
cagcaagacgcactggggctatgtccccagcgtccgcagcactgtgaccaagactgcaat
aagccggggcgaacgaaccaagccaatcagtcgcatcaacattgccgcgactcccgtgta
aacccaccaacgcagccgtacggggggaactcgtctgcgactggcagtagcagcaagagc
agccctaactacggctccagctatcacctgtggccggagagcccgcataagggagaagag
cggatactaatcgatcattatcaggcaaccactgagcagaagaagctgagccatgctgga
tccaagccctgcctctccgagagcagcggccgactccctcagatagccatgaacacctgc
aagtacaatggcggcgtagtgagaccactgggcagcctggcgtcgtcgcggcgcaaccta
gcagagctcgactcggagacgcagcccctccagacgttgcacagctccggcctggaggtg
gtggtatcaaagggcaacggcgaggaccccagcaaggcgtccaacgagagcctggtcagg
gacggaaacggtgctcctgtgaagaagaacaaggacattggctataggctcggccaccgg
agggcgctctttgagaaacggaagagactcagtgactacgccctcatctttggaatgttc
gggatcgtcgtcatggtgactgagactgaactgtcctggggagtttacggcaaggaatct
tcgtactcatttgcactgaaatgccttatcagcctttccactgttatattgcttggtctt
ataataatgtaccatgcccgggaaatccagctgtttatggtggacaatggggcagacgac
tggaggatagccatgacgtacgaacgcatcttcttcatcgtgctggagctgctggtgtgc
gccatccaccccatcccgggccattaccgcttcacgtggacggcacggatcgccttcacc
tacacgccgtcgacggccaacgccgacgtggacatcatcctctccatccccatgttcctc
aggctctacctgatcggccgcgtcatgctgctgcacagcaagctcttcacagacgcctcg
tcgcgcagcatcggcgccctcaacaagatcaacttcaacacacgcttcgtcatgaagacg
ctcatgaccatctgccccggcaccgtgctgctggtcttcagcatctcctcctggatcatc
gccgcctggacggtgcgagtctgcgagaggtatcatgacacacaggaagtgaccagtaac
ttcctgggagccatgtggctcatctctattaccttcctctccattggctacggagacatg
gtacctaacacgtactgtgggaaaggcgtatgtctgcttacagggatcatgggagctggc
tgcactgcactggtggtcgccgtggtagccaggaagttggagttgaccaaggctgagaag
catgtccacaacttcatgatggacacacaactctgcaaacgagtaaagaacacagctgcc
aatgtactcagggaaacatggctcatctacaaacacactaagttggtcaagaagatcgat
cacgccaaggtgcggaaacaccagcgcaagtttctacaggccatccatcaagctcagaaa
ctgcgcagtgtgaagatggagcagaggaaactcaatgatcaggccaacacgctagtagac
ctggctaagacccagaacgtgatgtatgacctggtgtcggagctgcaggagcgtagcgag
gaactggacaagcggatcggcatgctagaggaaaagctggactcggtgacgggcagccta
caggctctgccctgtctcatctcccaagccataaaccagcagcagcaggaattcctggac
ggcttcctacaccgcttccggcccacctcactgggctcagagcgctccgaacgttccgtg
cgttcctggacctccaccgcccgccggcgtcgctcgccctcaacggcgccgcacacctcc
tctgacagcggttag
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