KEGG   Oncorhynchus mykiss (rainbow trout): 110508976
Entry
110508976         CDS       T07259                                 
Symbol
cldn1
Name
(RefSeq) claudin-1
  KO
K06087  claudin
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03272  Virion - Hepatitis viruses
omy04382  Cornified envelope formation
omy04514  Cell adhesion molecule (CAM) interaction
omy04530  Tight junction
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    110508976 (cldn1)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    110508976 (cldn1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    110508976 (cldn1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    110508976 (cldn1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:omy03037]
    110508976 (cldn1)
   04147 Exosome [BR:omy04147]
    110508976 (cldn1)
Cilium and associated proteins [BR:omy03037]
 Other cilia and associated proteins
  Stereociliary proteins
   110508976 (cldn1)
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   110508976 (cldn1)
  Exosomal proteins of colorectal cancer cells
   110508976 (cldn1)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 OppC_N TMEM37 DUF6479 Tweety DUF1218
Other DBs
NCBI-GeneID: 110508976
NCBI-ProteinID: XP_021445588
Ensembl: ENSOMYG00000045373
UniProt: A0A8C7UPB9
LinkDB
Position
28:31957635..31961212
AA seq 211 aa
MANAGIQLLGFVLSFIGFIGLIASTIMAEWKLSSYAGDNIITAQAMYEGLWKSCVSQSTG
QIQCKVYDSLLQLTGMVQGTRGLMVGAILLAGIAILVAMVGMKCTTCLAEDQEKKDKVAL
TGGIVIIIAGLCALVGTSWYGNRIAKEFYDPFTPTNSRYEFGKALFVGWGSACFTIIGGA
FLCCNCSSEGSGKSSRYPPNRSAAPPGRDYV
NT seq 636 nt   +upstreamnt  +downstreamnt
atggcaaacgcggggatacagctccttggattcgtcttgtcttttattggcttcatcggg
ttgatagcatccacgatcatggccgagtggaaactgtcatcctatgctggggacaacatc
ataacggcgcaagccatgtacgaggggctttggaagtcttgtgtgtcacagagcactggt
caaatccagtgtaaagtgtacgattcactgctccaactaacggggatggtgcagggcaca
cgaggtctcatggtgggtgccatcctgttggctggcattgcgatcctggtggccatggtg
ggcatgaagtgtaccacctgtctggctgaggaccaggagaagaaggacaaagttgccctg
actggaggaatcgtcatcattatcgcaggtctgtgtgctctggtggggacttcctggtac
gggaacagaatagcaaaggaattctacgaccccttcactcctacaaattccaggtatgag
tttggcaaggccctgttcgtaggttggggctctgcttgcttcaccatcataggtggagcc
ttcctctgttgcaactgctccagtgaaggctcaggaaagtcctcccgctaccccccgaac
cgctccgctgccccaccaggcagagactacgtctag

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