Oncorhynchus mykiss (rainbow trout): 110508976
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Entry
110508976 CDS
T07259
Symbol
cldn1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03272
Virion - Hepatitis viruses
omy04382
Cornified envelope formation
omy04514
Cell adhesion molecule (CAM) interaction
omy04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
110508976 (cldn1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
110508976 (cldn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110508976 (cldn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110508976 (cldn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
110508976 (cldn1)
04147 Exosome [BR:
omy04147
]
110508976 (cldn1)
Cilium and associated proteins [BR:
omy03037
]
Other cilia and associated proteins
Stereociliary proteins
110508976 (cldn1)
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
110508976 (cldn1)
Exosomal proteins of colorectal cancer cells
110508976 (cldn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
OppC_N
TMEM37
DUF6479
Tweety
DUF1218
Motif
Other DBs
NCBI-GeneID:
110508976
NCBI-ProteinID:
XP_021445588
Ensembl:
ENSOMYG00000045373
UniProt:
A0A8C7UPB9
LinkDB
All DBs
Position
28:31957635..31961212
Genome browser
AA seq
211 aa
AA seq
DB search
MANAGIQLLGFVLSFIGFIGLIASTIMAEWKLSSYAGDNIITAQAMYEGLWKSCVSQSTG
QIQCKVYDSLLQLTGMVQGTRGLMVGAILLAGIAILVAMVGMKCTTCLAEDQEKKDKVAL
TGGIVIIIAGLCALVGTSWYGNRIAKEFYDPFTPTNSRYEFGKALFVGWGSACFTIIGGA
FLCCNCSSEGSGKSSRYPPNRSAAPPGRDYV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgcggggatacagctccttggattcgtcttgtcttttattggcttcatcggg
ttgatagcatccacgatcatggccgagtggaaactgtcatcctatgctggggacaacatc
ataacggcgcaagccatgtacgaggggctttggaagtcttgtgtgtcacagagcactggt
caaatccagtgtaaagtgtacgattcactgctccaactaacggggatggtgcagggcaca
cgaggtctcatggtgggtgccatcctgttggctggcattgcgatcctggtggccatggtg
ggcatgaagtgtaccacctgtctggctgaggaccaggagaagaaggacaaagttgccctg
actggaggaatcgtcatcattatcgcaggtctgtgtgctctggtggggacttcctggtac
gggaacagaatagcaaaggaattctacgaccccttcactcctacaaattccaggtatgag
tttggcaaggccctgttcgtaggttggggctctgcttgcttcaccatcataggtggagcc
ttcctctgttgcaactgctccagtgaaggctcaggaaagtcctcccgctaccccccgaac
cgctccgctgccccaccaggcagagactacgtctag
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integrated database retrieval system