Oncorhynchus mykiss (rainbow trout): 110509042
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Entry
110509042 CDS
T07259
Symbol
cfap57
Name
(RefSeq) cilia- and flagella-associated protein 57 isoform X1
KO
K24729
cilia- and flagella-associated protein 57
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
110509042 (cfap57)
Cilium and associated proteins [BR:
omy03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
110509042 (cfap57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
WDR55
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
NBCH_WD40
ATG16
CC4_CEP85
YabA
Beta-prop_Nup120_160
TMF_DNA_bd
Lactonase
DUF1912
Motif
Other DBs
NCBI-GeneID:
110509042
NCBI-ProteinID:
XP_036822584
Ensembl:
ENSOMYG00000028033
UniProt:
A0A8K9X933
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Position
28:33811613..33850430
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AA seq
1219 aa
AA seq
DB search
MASVVAQCHYIFGLRTGVINNICYFDEQTVIFPCGNNCVRYNIDQRWQRFIPGTEKSQGM
QALAISANRRYLAVSERGEKGTITVYDLQHEQSRKRKVLSGGEVPVLEFVSMAFSPDSKY
LIGQAGAPDWTLFYWMWEKQKVMASVKTTGSTNPINQVSFNPQDNTQICVSGNGVFKLFR
YAEGALKQSNFLKLESQNFLSHTWMSEERVIAGTETGRLLVFESGDLRWEMSVTTKPATQ
EADRQLERRKPEEVKSEGAAPSRMPRITAITSYSKGFACSAGPGTVCLFEKTEEKDNYRK
TREIRIPADPCSNEPSHAEQQEMVTLCISPSEETLVTSTDRGQLYSITLSSAEMSKGEQA
HFEFLSHSFHSNIITGLSICIRKPLIATCSLDHSVRIWNFETNVLELHKEFQEEAFSVAL
HPSGLFILVGFSDKLRLMNLLIDDVRTFKEFTVRGCRECVFSHGGHMFAAVNGNLIHIYS
STTFDNLLNLKGHNGKVRAIVWSTDDSRLVSCGMDGAVYEWNTLNSKRESESVLKSCSYT
GVTISPDAKTIFAVGTDCTLKEIQDCQILREVAADDVAYTTIAMSRSGRVLFAGTSIGTV
RAIKYPLSTQKDWIEYQAHSGAVTKMVITFDDQYLLTVSEDCCLLIWKIIDKEGRGLKRD
KDITYAEEILITKSDLEEKNQIMMELKTRVEELKMENEYQLRLKDMNYNEKIKDLSEKFV
QEIESLKTKNQVLKTEKEKQEMSHLEVTREVVEKHSREQQDFESTSNQKLMLEYEKYQEL
QLKSQLMQEGYERQLQAMEDSKGRALEELTLFYEAKLQEKMLMLGQCQDESRQQMREFEE
SKKQMEEDGDREIQDIRIKYERKLRVEKEINLRLKGETGVMRKKFSSLQKDIDDRNVEIE
KLRVEQQKLRGVIKSLEKDILGLKKEIQERDETIQDKEKRIYDLKKKNQELEKFKFVLDY
KIKELKKQIEPRENDIKEMKEQIQEMEGELDQVHKRNTQLELNITELKLKLKATDKEMHK
ETQRVRDVEALVRRFKTDLHNCVGFIQEPKRLKDSIRELYDHYVQQSDVVDIVGVDADIQ
REYSRQREHLERNVASLKRKLAKDTEVHRTENVKIMKENVSLIKEINDLRRELRLVRTQV
HDNKSQSGISKKKLSSSDLTALTSVEGRGLVARLNFEEEAERIIQLQRVEIQRLKMQMQG
QSHSLIPPSSSTKLPVLTT
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggttgtagcccagtgtcactacatcttcggtttgcggacaggagtaataaat
aatatttgctacttcgatgagcagacggtcatcttcccatgcggaaacaactgtgtacgc
tacaacattgaccagagatggcagaggttcattccaggcacagagaaaagccagggcatg
caggccctggccatcagcgccaaccgccgctacctggccgtgtcagagcgtggtgagaag
ggcaccatcaccgtgtacgacctgcagcacgagcagagccggaagcggaaggtgctcagt
gggggagaggtccccgtgctggaatttgtctccatggccttctcccccgactccaagtac
ctgatagggcaggcaggagcccccgactggaccctgttctactggatgtgggagaagcag
aaggtcatggcctcagtgaagacgacagggtccaccaaccccatcaaccaggtcagcttt
aacccgcaggacaacacccagatctgcgtgagcggcaatggggtcttcaagctcttccgc
tatgctgagggcgccctgaagcagtccaacttccttaagctggagtcccagaacttcctg
tcgcacacctggatgtccgaggagcgtgtcatagcggggacagagacgggcaggctgctg
gtgttcgagtcaggtgacctgcgctgggagatgagcgtcaccaccaagcctgccacacag
gaggcagacagacaactagagaggagaaagccagaggaggtcaagtcagagggggcagcc
ccatcccgtatgcccagaatcacagccatcacgtcctactctaagggctttgcctgctct
gccggcccagggaccgtgtgtctgtttgagaagacagaggagaaggacaactacagaaag
actagggagatcaggatcccggcagacccgtgcagcaacgagccgagccatgcggagcag
caggagatggtcacactgtgtatcagcccgtcagaggagaccctggtcaccagtacagac
cgtggtcagctctacagcatcaccctgtcctctgctgagatgagcaagggggagcaagcc
cactttgagttcctgtcccactcgtttcactccaacatcatcacaggtctgtccatctgc
atccgcaagccccttatcgccacatgctccctggaccactccgtacgcatctggaacttt
gagaccaatgtgctggagctgcataaggagttccaggaagaggccttcagcgtggccctg
cacccctctggtctcttcatcctggtgggcttctccgacaagctgcgcctcatgaacctg
ctcatcgacgatgttaggaccttcaaggagttcactgtcagaggctgcagagagtgtgtt
ttcagtcatgggggacacatgttcgctgctgtcaacggaaacctcatccacatctactcc
tccactacatttgacaacctcttaaatctgaagggccacaatggaaaggtgcgtgccatc
gtgtggagcaccgacgacagtcgcctggtgtcgtgcgggatggacggggccgtgtacgag
tggaacacgctgaacagcaagcgcgagtcggagagcgttctgaagtcctgcagctacact
ggcgtcaccatctcgcccgatgccaagactatcttcgccgtggggacagactgtaccctt
aaggagatccaagactgtcagatccttagggaggtggcagcggacgacgtggcttacacc
accatcgctatgtcccggtcgggacgggtgctcttcgcagggacctccatcgggactgtc
agggccatcaagtaccctctatccacacagaaagactggatcgagtaccaggcccactca
ggggctgtcaccaagatggtgatcacgtttgacgaccagtacctgctgacggtgtctgag
gactgctgcctgctcatctggaagatcatagacaaggagggccgcggcctgaagagagac
aaggacatcacctacgctgaggagatcctcatcaccaagtcagacctggaggagaagaac
cagatcatgatggagctgaagacccgtgtggaggagctgaagatggaaaatgagtaccag
ctgcgtctgaaggacatgaactacaacgagaaaatcaaggacctctcagagaagtttgtc
caagagatcgagtccctcaagaccaaaaaccaggtcctgaaaacggagaaagagaagcag
gaaatgtcccacctggaggtcacgagggaggtcgtggagaaacactccagagagcagcag
gatttcgagtcgaccagtaaccagaagctgatgctggagtacgagaagtaccaggagctg
cagcttaagtcgcagctcatgcaggagggctatgagcggcagctgcaggccatggaggac
agcaagggtcgcgccctggaggagctcaccctcttctacgaagccaagctccaggagaag
atgctcatgctgggccagtgtcaggacgagtccaggcagcagatgagggagtttgaggag
tccaagaagcagatggaggaggacggagaccgggagatccaggacatccgcatcaagtac
gagaggaagctacgggtagagaaagagatcaacctgcgcctgaagggagagacgggcgtc
atgaggaaaaagttcagcagcctgcagaaggatatagacgaccgcaacgtggagattgag
aagctgagggtggagcagcagaagctacgaggggtcatcaagtccctggagaaggacatc
ctgggcctgaagaaagagatccaagagagggacgagaccatccaggataaggagaagaga
atctacgacttgaagaagaagaaccaggagctggagaagttcaagtttgtcctggactac
aagatcaaagaactgaagaaacagatcgagcccagagagaacgacatcaaggagatgaag
gagcagattcaagagatggagggcgagctggaccaggtccacaagagaaacactcagctg
gagctgaacatcactgagctgaaactcaaactgaaagccaccgataaggagatgcacaag
gagacgcagagggtgagggacgtggaggccctggtacgcaggttcaagacagacctccat
aactgtgtaggcttcatccaggagcctaagaggttaaaggatagtatcagagagctctat
gatcactacgtccagcagagtgatgtggtggacatagtgggtgtggacgcagacatccag
agggagtacagtcgtcagagggaacacctggagaggaatgtggcgtctctgaagaggaag
ctggccaaagacacagaggtccaccggacagaaaacgtcaagatcatgaaggagaacgtg
tctctgataaaggagatcaatgatctgaggcgggagctgcgtctggtgaggactcaggtc
cacgacaataagagccaatcaggcatcagcaaaaagaaactgagctcctcagacctcact
gcgctgacctctgtggaggggaggggtttagtggcgaggctgaatttcgaggaggaagcg
gagcgtatcatccagctgcagcgcgtggagatccagaggctgaagatgcagatgcagggc
cagagccactccctaatacccccctctagcagcaccaagctgcctgtactcaccacttga
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integrated database retrieval system
