Oncorhynchus mykiss (rainbow trout): 110509103
Help
Entry
110509103 CDS
T07259
Symbol
ubtfl
Name
(RefSeq) upstream binding transcription factor, like isoform X1
KO
K09273
upstream-binding transcription factor
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110509103 (ubtfl)
03021 Transcription machinery [BR:
omy03021
]
110509103 (ubtfl)
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
110509103 (ubtfl)
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
110509103 (ubtfl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
DUF4473
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
110509103
NCBI-ProteinID:
XP_036822069
Ensembl:
ENSOMYG00000033155
LinkDB
All DBs
Position
28:36178766..36197438
Genome browser
AA seq
752 aa
AA seq
DB search
MNGSSSVSSASQTIQIKTEPVVDAWSKEDCLTLLERIRSLLPDGDAMKYKTTESHFDWEK
VCFGGFTGDMCKQKWAKVSTEVRKFRTMTELIVDAIEFVKNPYKGKKLKTHPDFPKKPLT
PYFRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPDKKKQKYITEFQREKESFEKNMA
RFKEDYPELIEERKKSDLPEKPKTPQQLWYNHEKKTYMKLHPDVSQKELKEALRRQWSQL
SDKKRLKWISKALELQKDYAGCMRVYQEAHPDAEEHVKSVLTKAERQLKDKFDGRPTKPP
PNGYSLYCAELMVNMKDVPSTERMVLCSKQWKVMTQKEKDMFQKRCEQKKKQYEIDLQRF
LESLPEEERDRVMTEEKLGGSRLGMGGVGSPHRSKSPSAKVGLTKLQQERCREAEQGHWV
HSGLTTKEKRDGKKRTKLPETPKTAEEMWQQGVVGDYLAKYRSDRKKTQSAMESAWKAME
KKEKIPWIKKAAEDQKRYEVQYRPVRELLEMRTAQAGAGQRKPKFEGEPRKPPVSGYQMF
SQELLTNGELNHFSLKERMVEIGKRWHKLSQSHKDKYKKLVEELQIEYKAELEAWVKSLS
PQERAVYKEFSTTKRRSTTKARGGPGAKVRVTAVKGKAVGARAAAAGVGGGKRAMAYRAK
VTVPFSSDCFPQTDGDTHSRIRPTQMTMTRRTRQTPTTNHPAAPTAKIMTTTNLRAPAAL
PQRTAVTQTQTSPHPPILPPQKRRVCAGHASS
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcagcagcagtgtgtcctctgcgtcacagaccatccagataaaaacagaacca
gttgtggatgcttggagtaaggaggactgcctcactcttttggagagaattcggagcctg
ttgcctgatggtgatgccatgaaatacaaaaccacagagtcccactttgactgggagaag
gtctgcttcggaggcttcaccggtgacatgtgcaaacagaagtgggcgaaggtgtccacc
gaggtgcggaagtttaggactatgaccgagctcatagttgatgccattgagtttgtgaag
aacccttacaaaggcaagaaattgaagacacatccagacttcccaaagaaaccccttaca
ccgtatttccggttcttcatggagaagcgagccaagtatgccaagatccacccggagatg
agcaaccttgacctcaccaagattctgtccaagaaatacaaggaactcccagacaagaaa
aagcaaaagtacatcacagagtttcagcgagagaaggagtcctttgagaagaatatggcc
cgattcaaagaggactacccggagttgatagaggagagaaagaagtcggacctccctgag
aagcccaagacaccccagcagctgtggtacaaccatgagaagaagacctacatgaagctc
caccctgatgtgagccagaaggagctgaaggaagctctgaggagacagtggtcccagctg
tcagacaagaagagacttaagtggatcagcaaggccctggagctgcagaaagactatgcg
ggttgtatgagagtctaccaagaggcccatccagacgctgaagagcacgtcaagtccgtc
ctcaccaaagccgagcggcagctcaaggacaagttcgacggcagaccaaccaaaccaccg
ccgaacggttactccctatactgtgccgagctgatggtgaacatgaaggatgttcccagt
acggagcgtatggtgctgtgcagtaagcagtggaaggtgatgacgcagaaggagaaggac
atgtttcagaaacgctgtgagcagaaaaagaagcagtacgaaattgacctacagaggttt
ctcgagagcctcccggaggaggagagggaccgggtgatgacggaggagaagctggggggc
tcgcggctgggcatggggggtgttggcagccctcacagatccaagtccccgtccgccaag
gtgggtctcacaaaactacaacaggagcgctgtcgcgaagctgagcaggggcactgggta
cactccggcctgacgacgaaagagaagcgcgacggcaagaagaggaccaaactccctgag
acacccaagactgccgaggagatgtggcaacaaggcgtcgtaggagactacctggccaag
tacaggagtgaccgtaagaagacccagagtgccatggagtcagcctggaaggccatggag
aagaaggagaagatcccttggatcaagaaggcggctgaagaccagaagcgatacgaggtt
cagtaccggcccgtgagggaattgttggagatgagaacagcccaggcaggagcaggccag
aggaaacccaagtttgaaggggagcccaggaagccaccagtgagtggctaccagatgttc
tcccaggagttgctgaccaacggcgagctgaaccacttcagcctgaaggagcggatggtg
gagatcggcaagcgctggcacaagctcagccagagtcacaaggacaagtacaagaagctg
gtggaggaactgcagattgagtacaaggccgagctggaggcctgggtcaagtctctctct
ccccaggagcgagcggtttataaagagttctctaccacgaaacggcggagcaccaccaag
gcgcgggggggcccgggggccaaggttcgcgtgactgcagtgaaggggaaggcggtaggt
gccagagccgcagcagcaggggtcggggggggcaagcgggccatggcgtaccgggccaag
gtaaccgtgccgttctcgtcggactgcttcccgcaaacagacggagacacacacagcagg
atacgtccgactcagatgacgatgacaagacggactcgtcagactccgacgacgaatcat
ccggcagctccgacagcgaagataatgacgacgaccaatctgagggctccagcagctctt
cctcagaggacagcagtgactcagacacagactagcccccacccccccatcctccccccc
caaaagaggagggtctgtgcgggacacgcttcctcatga
DBGET
integrated database retrieval system
