Oncorhynchus mykiss (rainbow trout): 110509108
Help
Entry
110509108 CDS
T07259
Symbol
abcf2a
Name
(RefSeq) ATP-binding cassette sub-family F member 2 isoform X1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omy03009
]
110509108 (abcf2a)
Ribosome biogenesis [BR:
omy03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
110509108 (abcf2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_15
MMR_HSR1
RsgA_GTPase
AAA_22
AAA_28
XRCC4_CC
NACHT
VapE-like_dom
AAA_23
AAA_33
Dynamin_N
Hac8_like_N
Motif
Other DBs
NCBI-GeneID:
110509108
NCBI-ProteinID:
XP_021445749
Ensembl:
ENSOMYG00000034471
LinkDB
All DBs
Position
28:complement(36424954..36437017)
Genome browser
AA seq
662 aa
AA seq
DB search
MGQGHPGRLNPPLTRTTLGQLCAASRDSWPAATHPGIKPGLNFFPSRSSAAMPSDLAKKK
AQKKKEAAKSRQKAKKPGEDGEGEILEQGQQNGAESNGVDMLTKEMDEFELKKTEARAVT
GVLASHPNSTDVHVASLSLTFHGQELLQDTSLELNSGRRYGLIGLNGTGKSMLLSAIGHR
EIPIPEHIDIYHLTREMAPSDKTALQCVMEVDAERIHLEKEAERLASEDSECEKLMELYE
RLEELDADKAEVRASQILHGLGFTAAMQQKKLKDFSGGWRMRVALARALFLKPFMLLLDE
PTNHLDLDACVWLEEELSQFKRILVLISHSQDFLNGVCTNIMHLHERKLKYYTGNYDQYI
KTREELEENQMKRFNWEQDQIKHMKNYIARFGHGSAKLARQAQSKEKTLQKMVASGLTES
VSNDKTLSFCFPPCGKIPPPVIMVQNVSFKYSDDQPHIYKNLEFGIDLDTRVALVGPNGA
GKSTLLKLLTGELLPTDGMIRKNSHVKIGRYHQHLTEQLELDLSPLDYMMKCYPEIKERE
EMRKIIGRYGLTGKQQVNPIRNLSDGQKCRVCFAWLAGQNAHMLFLDEPTNHLDIETIDA
LADAINEYEGGMMLVSHDFRLIQQVAQEIWVCEKQTITKWNRDILAYKHHLKKKIDKNSH
GV
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaggacatcccggccggctaaaccctcccctaacccggacgacactgggccaa
ttgtgtgccgcctcaagggactcgtggccagctgcgacacatcctgggatcaaacccggg
ttgaatttttttccctcgaggtcctcagcagccatgccctccgacctggccaagaagaag
gcgcagaagaagaaggaagccgccaaatcccggcagaaggccaaaaaaccaggagaggac
ggagagggagagatactagagcaaggccagcagaatggagcagaaagcaacggagtggat
atgctgaccaaggagatggacgagtttgagctgaagaaaacagaggcgcgggctgtaacc
ggcgtcctggcgtcgcaccccaacagcacggacgtccacgtcgccagcttgtcgctcacc
ttccacgggcaagagctgttgcaggacaccagcctggagctcaactcgggccggcgctat
ggcctcattggcctcaacggcactggtaaatccatgttgctgtcagccattggccaccgc
gagatacctatcccagagcacattgacatctaccacctgacccgtgagatggcgcccagc
gacaagacggccctgcagtgtgtcatggaggtggacgcggagaggatccatctggagaag
gaggccgagcgcctggcctccgaggactctgagtgtgagaagctgatggagctgtatgag
cgtctggaggagctggacgcagacaaggccgaggtgcgggcctcccagatcctccacggc
ctgggctttaccgccgccatgcagcagaagaagctcaaggacttcagcggaggctggagg
atgcgtgtcgctctggccagagccctgttcttgaagcccttcatgttgctgctggatgag
cccaccaatcacttggacttggatgcctgtgtgtggctggaggaagagcttagccaattt
aaacgtattttggtcctgatttcccattcgcaagacttccttaacggcgtgtgcaccaac
atcatgcacttacacgagcgcaagctgaaatactacacgggcaactacgatcagtacata
aagaccagggaggagctggaagagaaccagatgaagagattcaactgggagcaggaccag
atcaaacacatgaagaactacatagcccggtttgggcacggctcagccaagttggctcgc
caagcccagagtaaagagaaaaccctgcagaagatggtggcctctggcctgactgagagc
gtttccaatgacaaaaccctgtcattttgttttcctccctgtgggaagattccccctccg
gtcatcatggtacagaatgtcagcttcaagtactccgatgaccagccccatatatacaag
aaccttgagttcggcatagacctcgacacccgagtggcccttgtggggcccaacggggcc
gggaaatccaccttgctcaaacttctcactggagagctcctccctactgacggtatgatc
cgcaagaactcccacgtcaagattggcagatatcaccagcatctaactgagcagctggaa
ctcgacctctcgcccctggactacatgatgaagtgttacccagagatcaaggagagggag
gagatgaggaagatcattggccgttatgggctgacgggcaaacagcaggtgaaccccatc
cggaacctgtctgatgggcagaagtgccgggtgtgcttcgcctggctggctggtcagaat
gcccacatgctcttcctggatgagcccaccaatcacttggacatcgagaccattgacgcc
ctggccgacgccatcaacgagtacgagggcggcatgatgttggttagccacgacttcagg
ctcatccagcaggtggcccaggagatctgggtttgtgaaaagcagacgatcaccaaatgg
aaccgggacatcttggcttacaaacaccatctgaaaaagaagattgacaaaaattcgcac
ggtgtataa
DBGET
integrated database retrieval system
