Oncorhynchus mykiss (rainbow trout): 110509156
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Entry
110509156 CDS
T07259
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110509156
03041 Spliceosome [BR:
omy03041
]
110509156
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
110509156
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110509156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
FUBP_C
Motif
Other DBs
NCBI-GeneID:
110509156
NCBI-ProteinID:
XP_036822724
UniProt:
A0A8C7R8E9
LinkDB
All DBs
Position
28:40874061..40903421
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AA seq
658 aa
AA seq
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MADYSNVAPPSGNGAGMNDAFKDALQRARQIAAKIGGDGVPPAAPSGSEFGYGGQKRPLE
DAGEYDQPETKKVAPNDSFSTAMGMGGMGGGGMGGGGPRSSSEEFKVPDGMVGFIIGRGG
EQISRMQQEAGCKIQIAPDSGGMPDRSVTLTGSPDSILAAKRLLTEIVDKGRPSPAFHHN
DAGGPGMSVQEMLVPASKAGLVIGKGGETIKQLQERAGVKMVMIQEGPQNTGADKPLRIS
GEPFKVQQAKDMVMELIREQGFREQRGEYGSRMGGGGGGGGGGGGGEGLDVPVPRFAVGI
VIGRNGEMIKKIQSDTGVRIQFKPDDGTTPERIAQIIGPPDQSQHAAEIITDLLRSVQQG
GPGGPNGGGRGRGRGGNGGGNWNMGPPGGLQEFTFTVPTMKTGLIIGKGGETIKGISQQS
GARIELQRNPPPNSDPNIKMFTVRGSHQQIDYARQLVEEKIGGPVSPMGGPHGPPGPHGG
PSPHGPPGPPGPPAQMGPYNPGPYNQGPPGPHGPPAPYQPQGWGNGFPHWQQGQPDPGKA
AADANAAAWAAYYSQYQQQPQAPMTPTGGAPGNPQANGQGQQPQDYTKAWEEYYKKQGQA
APQASAAGGQPGGQPAGQPGGQPDYSAAWAEYYRQQAAYYGQGSPQAMGAQPQAPQGQ
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggccgactattcaaacgtggctccgccgtcgggaaatggcgcaggaatgaacgacgct
tttaaagacgcacttcagcgagctagacagattgcggcaaagattgggggggacggcgta
ccccccgcggcgccctcaggcagtgagtttggctatggaggccagaagcgaccccttgaa
gatgccggtgagtacgaccaaccagagaccaagaaggtggcacccaatgactcgttctca
acagcgatgggaatgggaggaatgggaggtggaggaatgggaggtggtggaccacgatcg
tcgtcagaggagttcaaggttcctgacggaatggttggattcattattggaagaggagga
gaacagatatcccgcatgcaacaggaagcgggctgtaaaatccagatcgcccccgacagt
ggaggtatgcctgataggtcggtgacactgactggatccccagactccatattagctgcc
aagaggctgctgacggagatcgttgataagggtcgtccttctccagctttccaccacaac
gacgccggtggccccggtatgtctgtccaggagatgctggtccctgcctccaaggctggc
ctggtcatcgggaagggaggagagaccatcaaacagctgcaggagagggccggggtcaag
atggtgatgatccaggaagggcctcagaacacaggagcggacaaacctctacgcatctct
ggggaaccttttaaagtccagcaagccaaggacatggtgatggagctgatcagagagcag
ggcttcagggagcagagaggagagtatggctccaggatgggaggaggaggaggaggcggc
ggtggaggaggaggaggagagggcctagatgttcctgtccccaggtttgcggtaggaatc
gtgatcgggagaaacggagagatgatcaagaagatccagagcgacacaggagtcaggatc
cagttcaaaccagatgacggcactaccccggagaggatagcccagatcataggtcctcca
gaccagtcccagcatgcagcagagatcatcactgaccttctgaggagtgtccagcagggg
gggccgggtggtcctaacggagggggcagggggagaggcagggggggtaacggggggggg
aactggaacatgggtcctccaggaggattgcaggagttcaccttcaccgtccctaccatg
aagactggactcatcatcggcaaaggaggagagaccatcaagggcatcagtcagcagtct
ggggcgcgtattgagctccagagaaatcctccccccaactccgaccccaacattaagatg
ttcaccgtccgaggatctcatcaacagatagactacgcacggcagctggtcgaggagaag
atcgggggtccagtcagtccaatgggtggtcctcacggcccaccaggcccccacggaggt
ccctctccccacgggccccccggcccacctggaccccctgctcagatgggcccctacaac
cccggcccctacaaccagggaccccctggaccacatggtcctccggctccctaccagcct
cagggttggggcaacggcttcccccattggcagcaaggacaaccagaccctggtaaagct
gcagctgatgccaacgcggcggcctgggcagcgtattactcccagtaccagcagcaaccc
caggcccccatgacgcccaccggcggagcccccggcaacccacaggccaatgggcaaggt
cagcaaccacaggactacaccaaggcctgggaagagtactataagaaacaaggtcaagct
gccccccaggcatcagcagcaggcggtcagccaggcggtcagccagcaggtcagccaggc
ggtcagccggactacagtgctgcctgggcagagtactaccgtcagcaggctgcttactac
ggacagggaagcccacaggccatgggagcccagccgcaagcacctcagggccagtaa
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