Oncorhynchus mykiss (rainbow trout): 110509183
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Entry
110509183 CDS
T07259
Symbol
myom1a
Name
(RefSeq) myomesin 1a (skelemin) isoform X1
KO
K24495
myomesin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110509183 (myom1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110509183 (myom1a)
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
110509183 (myom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
ig
Ig_DSCAM-DSCAML_C
Ig_2
V-set
C2-set_2
C2-set_3
Motif
Other DBs
NCBI-GeneID:
110509183
NCBI-ProteinID:
XP_036822887
LinkDB
All DBs
Position
28:43199050..43302773
Genome browser
AA seq
1474 aa
AA seq
DB search
MSASFHVKQHHHHSDKKQQHESISHHSSRSSFSQLSYAAHKRIQHSTIGVQQSFVESEKR
SEFIPSQLLPPRVKKYLAMDPDTNDVIGYIVPVFRTSHEFARGLVEVQEEVKEEGVGHVA
MRNLFSLETSSMETITVEKKSRKRHIRESADRLELSKKVEERAEFRKKQNSDNLTHPPEF
IVRPRGQTVWEGKTVKLHCTVSGWPKPRIAWYKNNVVIDEKAHPDKYTAESNYNMHSLEI
KSCDFLDTAQYRVSALNIKGESSSVATVVIKRFQEGQKVGTLDAKPHGFCSEHGVTFETA
IIDSFEVAFGREGETLSLGCTVIVYPTVKRYQPDVLWYRNGKALAESKWVHTHWSGEKAT
LTLIHLNKEDEGLYTLRVNTKSGFQSYSAYVFVRDEEVELEGVPVAPLDVRCHDANKDYV
VVTWKQPAVEGSSSILGYFIDRCEVGHHHWAQCNDTPVKYARFPVTGLIEGRSYTFRVRA
INRAGVSRPSRASDPVTAIDPHDRARHRAGPSAPFTGMIKFTEEDATVGVVPGEPTDLVV
TEATKNYVVLAWSPPAQRGHEGVVYLVEKCVAGSECWQRANTGMPVKSPRFALFDLAEGK
SYSFRVRCCNSAGMSEASSATGDITVGDMLDLPAAPGPAVATRNTDTSVVVSWGASKDVK
HLVGYYINYTVAGSDVWTPANNKPVKGTRFVCHGLNTGDSCVFRVKAVNAAGYSHSSLES
EAVVVKAGIAIPGVPSGVHLMEAARDYMVLAWREPAVTGGADIRGYFVDYRTVKGGVEGQ
WHELNPKAVTCTSYKAENLKENLFYQFQVRAINMAGVSEASLPSAALECKEWTIAKPGAP
HDLHVLEVRDSSLVLLWEPPTFDGRTPVNGFYVDIKEAVAGEDWKGVHEKATKLKYMKVN
GLIAGRSYVFRVRAQNLAGVGKTSAVLGPVLALTMPGTHEIILDVDDDGVISMIFECSEM
AEGSEFIWSKNYKTLTDTSRLTIVTEGGKSRAIFNAPSLEDLGIFSCEVTNTVGVSASYT
LTEAGLKRLLDISHEHKFPIIPFKTQMAMELLEKGRVRFWTQVEKFTTGCHVDYVFNDAI
VENGEKYQMNFDKNSGIIEMFMDSLAVTDEGTFTFNLVDGKAKGSTSLVLIGEEFRELQK
KSEFEHAEWIRRQGPHFVDYLGFQVTPECNVLLKATIGNIRPETEIRWYKDGIEIEEDDA
DYKKIEMKDEVLIFNIGKLSKKDAGVYEVKLKDARGKDKSMFNLTEAGYQTVLNELFRVI
ANSSTEISVKSTEHGIVLYSLITYHMEDLQVGWLHKEAKIAHSDRVQCGVTGEQLWLKVN
EPTEKDKGKYTINICDGKDGVKRFCDLSGQAWEEAFVEFQRLKAAAIAERNRARVVGGLP
DVVTIQEGKSLNLTGNVWGDPAPEVTWMKNDRELVSDERYALKFEHGKFASITIAAVTTT
DSGKYALLVKNKYGTEAGEFTVSVYIPEEEKKKE
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatcgttccacgtgaaacagcaccaccaccacagtgacaagaagcagcagcat
gagagcatcagccatcacagctctcgctcctcttttagtcagctgtcatatgctgcccac
aagagaatccagcacagcaccataggagtgcagcagagttttgttgaatcagagaagagg
tcggagttcatacctagccagctgctgccgccgagagtcaagaagtacctggccatggac
cctgacaccaacgatgtcattggatacatagttcctgtcttcaggaccagccatgagttt
gcccggggcctagttgaggtccaggaagaagtgaaggaggagggagtggggcatgttgcc
atgaggaacctgttctccctggagaccagctccatggagacgattaccgtggagaagaag
agcaggaagaggcacattagagagtcagctgaccgcctggagctcagcaagaaggttgag
gagagagcagagttccgtaagaaacagaacagtgacaacctgacccatcctcctgagttc
atagttcgtccccgaggacagactgtctgggagggcaagactgtcaagctgcactgcacc
gtgtctggatggcctaaaccacgtattgcatggtataagaacaatgtggtgatagatgag
aaggcccatcctgacaagtacacagcagagagtaactacaacatgcactctctggaaatc
aagagctgtgacttcctagacacggctcagtaccgtgtgtctgctctcaacataaaggga
gagagctcctccgtggccaccgtggttatcaagaggttccaggagggacagaaagtggga
actcttgatgctaaaccacatgggttctgctcggagcacggcgtgacctttgagacagcc
atcatagactcgtttgaggtggcgttcggccgggagggagagactctaagtctgggctgc
accgtcatcgtctaccccaccgttaaacgctaccagcctgatgtcctctggtacagaaat
ggcaaggccctggcagagtccaagtgggtccacacccactggagtggagagaaagccacc
ctgacactgatccatcttaacaaggaggatgaaggactctacaccctgagagttaacacc
aagtctggcttccagtcctactccgcttacgtcttcgtcagagatgaagaggtggagttg
gaaggtgttcccgttgcgcccctggacgtacgttgtcatgacgccaacaaggactacgtt
gtggtgacatggaaacagccggcggtggagggaagcagctccatcttgggatacttcatt
gataggtgtgaggtgggccaccaccactgggctcagtgtaacgacacccctgtgaagtac
gcccgtttcccggtaacggggctgattgaggggaggagctataccttccgggtcagagcc
atcaaccgggctggggtcagccgaccttctagagcctctgatcccgttaccgccatagac
ccccacgacagggctcgccatcgagctggtccctctgctcccttcaccggaatgatcaag
ttcactgaggaagacgctacagtgggcgtggtaccaggtgagcccaccgacctggtggtt
accgaggcaacgaagaactacgtggttctggcctggtctccgcccgctcaaagaggtcat
gaaggggttgtgtacctcgtagagaagtgtgttgctggtagtgagtgctggcagagggcc
aacacagggatgcctgtcaagtctcctcgcttcgcgctgtttgatctggcagaggggaag
agctacagtttcagagtccgctgctgtaactctgctgggatgtctgaggcctcctctgct
actggagatatcactgtaggagacatgctggacctgcctgcggcccccggcccagccgta
gccactaggaacacagatacatcagtcgttgtttcctggggggcgtctaaggatgtaaaa
cacctggtgggatattacatcaactatactgtggcgggcagtgatgtctggacacctgca
aacaacaagcctgttaaaggaactaggtttgtgtgccacggtctgaacacaggagactcg
tgtgtgttccgtgtgaaggcggtgaacgcagcagggtacagtcacagctctttggagtca
gaggccgtggtcgtcaaggctggcatcgccatccctggtgtccccagtggagtccacctg
atggaggcagctcgtgactacatggtgttagcctggagggagccggcggtgaccggggga
gctgacatcagaggatactttgtggactacaggacagtaaagggtggagttgaaggacag
tggcatgaactcaaccccaaggctgtcacctgtacttcctataaggcagagaacctgaag
gagaacttgttctaccagttccaagtgcgagccatcaacatggccggggtcagcgaggcc
tctctgcccagcgcagctctggagtgtaaagaatggaccattgctaagccaggtgctcct
catgatctccatgtgttggaggtgcgtgacagttccctggtgttgctgtgggaacctcct
accttcgatggccgtactcctgtcaacggcttctatgtggacatcaaggaggccgtggca
ggggaggactggaagggagtacatgagaaggccaccaagctgaagtacatgaaggtgaat
ggtctgattgcaggcaggtcctatgtgttcagggtgcgtgctcagaacctggctggagtg
ggaaagacttctgctgtgttaggacctgttctggctctaaccatgcctggtactcatgag
ataatactggatgtggatgatgatggtgtgatctccatgatctttgagtgttctgagatg
gccgaggggtcagagttcatctggtctaagaactacaagactctgacagacacctccaga
ctcaccatcgtcacagaggggggcaagtccagagcaatctttaatgctcccagtctggag
gaccttggtatcttctcctgtgaggttaccaacactgttggagtctcagccagctacact
ctaacggaggctggtctgaagcgtctcctggacatcagccacgagcacaagttccccatc
attcccttcaagactcagatggccatggagctcctggagaagggtcgtgtgaggttctgg
acccaggttgagaagttcaccactggctgccatgtggactatgtctttaacgatgcgatc
gtagagaatggagagaaataccaaatgaactttgacaagaactcaggcatcattgagatg
ttcatggactctctcgcggtcacagacgagggaacattcacctttaacctcgtggacggg
aaggccaaggggtccaccagcctggtgctgattggagaagagttcagagagctccagaaa
aagtctgagtttgaacatgctgaatggatcagaagacaaggtcctcacttcgtggactat
cttggtttccaggtcaccccagaatgcaacgtgctgctgaaggccacgataggaaacatc
aggccagagacagagatcagatggtacaaagacggaatagagattgaagaggatgatgct
gattacaagaagatcgagatgaaggacgaggtgttgatcttcaacatcggaaagttgtcc
aaaaaggatgcaggtgtgtacgaggtgaagctaaaggatgccagaggaaaagacaagagc
atgttcaacctgactgaagcaggttaccaaactgtgctaaacgaactgttcagggtgatt
gccaactcatcaactgagatcagtgtgaagagtacagaacatggtattgtcctctactcc
ttgatcacctatcacatggaggacctccaagtcggctggctgcacaaggaagcaaagatc
gcccactctgacagagtccagtgtggagtgaccggggagcagctgtggctcaaggtgaat
gagcccacagagaaagataagggcaaatacacaataaatatctgtgacggcaaggacggg
gttaagaggttctgtgacctgtctggacaagcctgggaggaagccttcgtagagttccag
aggctgaaggctgctgccattgcagagagaaaccgtgcccgggttgtgggaggtctgcca
gatgtggtcactatccaggagggcaagtctctgaacctgacaggcaacgtgtggggtgac
cctgcacccgaggtcacctggatgaagaacgacagagagctggtgtctgacgaacgctac
gccctcaagtttgaacacggcaagttcgccagcatcaccatcgcggcggtaaccacgacc
gactcagggaagtacgcactcctggtgaagaacaagtatggaactgaggcaggagagttc
actgtgtctgtctacatcccagaagaagagaagaagaaagagtag
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