Oncorhynchus mykiss (rainbow trout): 110509192
Help
Entry
110509192 CDS
T07259
Name
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110509192
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
110509192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-C2H2_15
zf-met
PDU_like
Motif
Other DBs
NCBI-GeneID:
110509192
NCBI-ProteinID:
XP_036822965
LinkDB
All DBs
Position
28:2094076..2190557
Genome browser
AA seq
1272 aa
AA seq
DB search
MADGPRCKRRKQANPKRNNVTNYNNVVEGQSDSDDEDKLHIVEEDPDGDSTVPEDASVVL
TQNGTETHQDTWDEVKEDCGSEEEDEEEGEEGEEEEGGKDALVEEMLQLGDTAVIYPEAP
EDEQKSMPERRVPDENGTPDALFQLLTCPYCSRGYKRCTALKEHIKLRHEKSEDNFSCSQ
CSYTFAYRTQLDRHMTQHKTQHKEPVQRHMPQTTTTTGGNRKFMCTECSKAFKYKHHLKE
HLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCVGMVPVNGTPRPVMKASQTPATQNQ
LSGTAPVAPTRLLLRGEKTDGKPLQEQLPVNQIKSEPVEYEYKPVAVGPNGAAGTNGAAG
TNGTVFTSGMAVPQGTGLPQGMVQAVVLPTVGLMSPISINLSDLQNVLKVAMDGNVFRQV
LGTANGLVTSKQGVVGQAGQQVISAISLPGFVDQDGTTKIIINYTLEPSLAQQPSAPQLL
KKEPLTAPTTTNIQPASKVTEKLTQDLSIIKTEQPDSESEKEMEKEEAQTEAEAEQSKEG
ETPKAQTGKTTCLLCDDCPGGLDALHMLQHCKPTNGEGGDGSPLDPSIAALLAEAGITPG
QPPLKNLLSLLKAYFALNAEPTEEELAKISDNVSLPVDIVKKWFEKMQSGQITVEPPGSS
SPLPSTGLGTETQAAQEKSGEQTEEQLASAQTQETSSSQPPNSSPASTSASPLVSASAPS
PLNLSSSGRVIVKTEEDSEGESQDLPLDLSLPKQPQSEPQVPHVPQEQPLNLTCLKKETS
HPQLQAQLQPQLPGFQTQLQSQLQPQLQAQIQAQLQPQLQAQLQPQLQGQLPGFQTQLQA
QGTTNTIYVTSPPQMATSSPVNIMTTQLVAITNQGSGVPCLRAISTGTTKRTILIPQLTY
TYTTKAGNNATGADGAQKTVILNGCQEEEKADTSSESVSAVEEQNDSDSAPPQKKMRRLE
SGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICNKAFKHKHHLIEHTRLHSGEKPY
RCDKCGKCFSHSGSYSQHMNHRYSYCKKEPQGDHQVGRRLRMTPEMSPQAEEQQLDSRPT
SPPSQLDSDERESEEELEEEEGEEEGMEAMSMDDIRVVQVGEDDEESEIYEVEDFEGERQ
EEEEEGSREEEAQQEEEEGQQEEEEAQQEEEEEEEEEMEVQVMGDGEAEEGEAEKETVVT
EKETVVTEKETVVTEKETVITEKETVVTEKETVVTEKAKETDNKEPHVDKENITETLENG
QKETEENKMNSE
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggcgaacccgaagaggaataacgta
acaaattacaacaatgttgtggagggccagtcagactctgatgatgaggacaagctacac
atagtggaggaagaccctgatggtgacagcacggtgccagaagacgcctcagtagtatta
acccagaacggtacagagactcaccaagacacctgggatgaagtgaaggaggactgtggc
tctgaagaagaggatgaggaggaaggggaagagggggaggaggaggaggggggtaaggat
gccctggtagaggagatgctacagttgggggatacagcggtcatctaccccgaagctcca
gaggacgagcagaagagcatgcctgagagacgggtcccagacgagaatggcacgccagac
gctcttttccagctcctgacctgcccatactgctcgcggggctacaagcgctgcactgcc
ctgaaggagcacatcaagctgcgccacgagaagagtgaggacaacttcagctgctcccag
tgcagctacaccttcgcctaccgcacacagctggaccgtcatatgacccaacacaagact
caacacaaggaacctgtacagcgccacatgccccaaaccacgacaacaacaggggggaat
aggaagttcatgtgtacagagtgttccaaggcttttaaatacaagcaccacctgaaggag
cacctgcgtattcacagcggagagaagccatacgagtgccccaactgtaagaagcgattt
tcccactccgggtcctacagctcccacatcagcagtaagaagtgtgttggcatggtgcct
gtcaacggtaccccccgaccagtcatgaaggcctcccagacccccgccacccagaaccag
ctttccggcactgcccccgtagcccctacccgactgctcctccggggggagaagacagat
ggcaagccccttcaggagcagctccccgtcaaccagatcaaatcagagccggtggaatat
gagtacaagccggtggcggtagggcctaacggggcagcagggactaatggggcagcaggg
actaacgggacagtgtttaccagtggcatggcggtaccccagggcacggggctgccacag
ggcatggtccaggcggtggtactgcccaccgttggtttgatgtctcctatcagtattaat
ctcagcgacctgcagaacgtactcaaggtggccatggatgggaatgtgtttcgccaggtg
ctggggacggccaacgggctggtgacgtccaagcagggggtggtggggcaggctgggcag
caggtcatctcagccatcagcctccctggcttcgtggaccaagacggaaccaccaagatc
attatcaactacaccctggagcccagcttggcccaacagcccagcgcacctcagctcctc
aagaaggaacctctcactgcccccaccaccacaaacatacagccagcctccaaagtaaca
gagaaactcacccaggacctcagcatcatcaagaccgagcagcccgactctgagtctgag
aaggagatggagaaagaggaggctcagaccgaggcagaggcagagcagagtaaggagggt
gaaactccaaaggcccagacaggcaagacaacatgtctgctgtgtgatgactgtcctggt
ggtttggatgcactacacatgctccagcactgtaaacctaccaatggggaggggggtgac
ggcagccccctggacccctctatcgccgccctgctggcagaagcagggataacaccaggc
cagccccctctgaagaacctgctctccctcctcaaggcctactttgccttaaacgcagag
cccaccgaggaagagctggccaagatctctgacaacgtcagcttgcccgtggacatagtc
aagaaatggtttgagaagatgcagtccggtcagattactgtcgagccccctggttcctct
tcccctctaccttcaacaggtcttggcacagagactcaggcggcccaagagaagagcgga
gagcagacagaggagcaactcgcctcggcccaaacccaggagacatcatcttcccaacct
cccaacagttcccctgcctcgacctccgcctcgcccttggtctcagcctcggctccctca
ccactaaacctctcctccagcggccgggtcatcgtgaaaacagaggaggactcagagggc
gagtctcaagatcttcccctggacctgtcacttcccaagcagccccaatcagagccccag
gtcccccatgtcccccaggagcaacccctcaacctcacctgtttgaagaaggaaacgtcc
catccccaactccaggcccagctccaaccccagctcccagggttccaaacccagctccag
tcccagctccaaccccagctccaggcccagatccaggcccagctccaaccccagctccag
gcccagctccaaccccagctccagggccagctcccagggttccaaacccagctccaggct
cagggaaccaccaacaccatctacgtcacttcccccccgcagatggccacctccagcccg
gttaacatcatgaccacccagctagtagccatcaccaaccagggcagcggtgtgccctgt
ctcagggccatctccactggcaccaccaaacggactatcctcatcccccagcttacctac
acatacaccactaaagcaggcaacaacgccactggggccgacggagcccagaagaccgtc
atactcaacggctgccaggaggaggagaaggctgacaccagttcagagagcgtgtcggcg
gtagaggagcagaacgactcggactcagcccctccacagaagaagatgcgtcggctggag
agtggcatgtatgcctgtgacctatgtgacaagatcttccagaagagcagctccctgctc
aggcataaatacgaacacacaggaaaacgtccacacgagtgtggcatctgcaacaaagcc
ttcaaacacaagcaccacttgatagagcacacgcgtctgcactccggagagaagccctac
cggtgtgacaagtgtggcaagtgtttctcccactcgggctcctactcccagcacatgaac
caccgatactcatactgcaagaaggagccccaaggagatcatcaggtggggcgtcggctc
aggatgacccccgaaatgagcccccaagcagaggagcagcagttagatagccggcccacc
tcccctccctcccaactggactcagatgagagggagagtgaggaggagctggaggaagag
gaaggagaggaggaaggcatggaagccatgagcatggacgacatacgggtggtgcaggtg
ggcgaggatgatgaagagagtgagatctacgaggtggaggactttgaaggggagaggcaa
gaggaggaggaagaagggagcagagaggaggaggcacagcaggaagaggaggagggacag
caggaagaggaggaggcacagcaggaagaggaggaggaggaggaggaggagatggaggta
caggtgatgggagatggggaggcggaggaaggagaggcagagaaggaaactgtggtaaca
gagaaggagactgtggtaacagagaaggagactgtggtaacagagaaggaaactgtgata
acagagaaggaaactgtggtaacagagaaggaaactgtggtaacagagaaggctaaggaa
acagataacaaagaaccacatgtggacaaagagaacattacagaaacattagaaaatgga
cagaaagaaacagaggaaaacaagatgaacagtgaatga
DBGET
integrated database retrieval system
