Oncorhynchus mykiss (rainbow trout): 110509332
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Entry
110509332 CDS
T07259
Symbol
cacna1bb
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
omy04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110509332 (cacna1bb)
04020 Calcium signaling pathway
110509332 (cacna1bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110509332 (cacna1bb)
Ion channels [BR:
omy04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
110509332 (cacna1bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
110509332
NCBI-ProteinID:
XP_036823384
Ensembl:
ENSOMYG00000040752
LinkDB
All DBs
Position
Y:16071600..16285864
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AA seq
2393 aa
AA seq
DB search
MARFAEDLPTRYGAGGGGRGAPGAGRGGARPGGPPGGQRMYKQSMAQRARTMAIYNPNPV
KQNCFTVNRSLFIFREDNLIRKYAKRITEWPPFEYLILATIIANCIVLALEQHLPASDKT
PMSERLDDTEPYFIGIFCFEGGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGS
DFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAILMFAIIGVEF
YMGKFHSTCFTVDTGERAAAFPCGTEAPSRMCPNGTECTEYWIGPNYGITNFDNILFAVL
TVFQCITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERER
VEKRQDFLKLRRQQQIERELTGYLEWICKAEEVLLAEEDENAEEKSPLDGAWYKRKQNLP
VLKRGKVKKSKNELIGAEEGDDHFTDMSSVVPPGSPFGRASVKSMKLDSSSYFRRKERRM
RFFIRRMVKAQSFYWTVLCLVGLNTLCVAIVHYDQPEWLTTALYLAEFVFLGLFLSEMSL
KMYGLGARNYFHSSFNCFDFGVIIGSILEVVWSMIKPGASYGISVLRALRLLRLFKFTKY
WNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEEETPTTNFDTFPA
AILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSVYFIVLTLFGNYTLLNVFLAIAVDN
LANAQELTKDEEKQEEEANKKLALQKAMEVKEVSPVSAANISIAVFVKQNRDVLSRSSSV
SSVHSPKEQQRANKIMSVWEQRTNQLRQNNLRASSEALFNELDPEERLRVSSALHLRPDM
KTHNDRPLVVEPGNGDKPRPPKEDRDGADPQQEGGDPYGPQLRKHHRHRERNGENGESRH
HTHHSRSRDHCHPDGPRPKEGKVERSHSREGGQGHRHHHQAGSPEEGVNGGGEEREHRHH
HSHRQPREGNGALANGARVERKGRGHKEGNGEGNGERRRYRSRMVRAQSTLDGEECRENG
KRDGDWDQGHRASLDAQGESLATSPVQPPAGLQAGEKQEDADNQKNSHRVSQAGLNSNTV
HIPVTITAPPRETTIIPMNNIDCESLPLNEEKKNLEEDEEELKNGPKHILPYSSMFVFGQ
TNPVRRLCHYVVNLRYFEMCILSVITMSSIALAAEDPVQANAPRNNVLKYLDYVFTGVFT
FEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFACSGTKGKDINTIKSLRVLRV
LRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDES
KSLEKDCRGKFLDYDRDDVAAQDREWRKYEFHYDNVLWAFLTLFTVSTGEGWPMVLKHSV
DATYEDQGPSPGFRMETSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKN
ERACIDFAINAKPLTRYMPADKQSFQYKMWKFVVSPPFEYSIMTMIALNTVVLMMKFHGA
PELYEAMLKYLNIVFTALFTLECILKIIAFGPLNYLKAAWNVFDFVTVLGSITDILVTEI
KTDKLINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAII
GMQVFGNIELNEESAINHHNNFQTFFQALMLLFRSATGEAWHEIMLSCLSNRPCDKLSGS
GGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDASILGPHHLDEFIRVWA
EYDPAACGRMTYLDMHEMLRHMSPPLGVGKKCPPRIAYKRLVKMNMPIADDNTVHFTSTL
MALIRTALEIKLASGVLAQRLCDADLRKEISRVWPNLPQKTVDLLVTPYKIDEFNELICP
FAVVNRELTVGKVYAALMIFDYYKQNRAKRLEQQLGLDFTGTIKNKKGAAFFRPMMPMTH
MQEETPITTAKPPPPSQPEPEPQPEPPPVTTSLTNGDTVPSPRSAIKESISGDQLSQEGQ
RSSTSSRTVQRGQSEDVPYSIKPQEPVEMRQVENGADLEGYFGLEGHGRAASMPRLDSQY
YRNHPRHLPGTYLAPIPDISPIRRSASTLASQRPQEVSLRDYTLETPSQAQALSSSAPGQ
AQDRPYHHHHHHRCHRRRDKDRDKKQKSLDRASSVQPSSIAGLPADPAVEGLSMERARER
DRGRPQERRHHSAAGEKQRYYSCERYGGREHYHTKSAGPSRSTSPGETHDLGLFKQSIGM
AKGSQVVLTSAFSTPCRGRRQLPQTPLTPRPAVAYKTANSSPVQFGATGHKSSLSRGLSE
HSALLESPAMPVTRIGSDPNLSPQSRGAPPRSLPEEPDDFQDTVSTHGGGGGRSPRTSAS
ASHGATEPSSAPAPQGRAGVPNGYHFTLGVNAGSSSSTRGTGSFREKEEDDWC
NT seq
7182 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcgcagaagatctacccacccgctatggagctggaggaggaggcagaggt
gcgccgggcgcaggcagagggggcgcccgaccaggtggtcctccaggcggccaaaggatg
tacaagcagtcgatggctcagagagccaggacaatggccatatacaaccctaacccagtc
aaacagaactgcttcactgtcaaccgatccttgttcatctttcgagaggacaatctcatt
aggaaatatgctaagcgaataaccgaatggcctccgtttgagtacttaatcctggccacc
atcatcgccaactgcatcgtactggccctggagcagcacctaccagccagcgacaagaca
cccatgtcagaacgcctggatgacacagagccctactttattggaatattctgtttcgag
ggcggcattaagatcatcgccttgggctttgcattccacaaaggctcgtacctccgcaac
ggctggaacgtaatggactttgtggtcgtcctcactgggatcctggctacggtggggtca
gactttgacctgaggactctgcgggcagtgagagtactcagacctctcaaactggtgtct
ggcatccccagtcttcaggtggtattgaagtctatcatgaaggccatggtgcctctgctc
cagataggcatgctgctcttcttcgccatactcatgtttgccatcatcggagtggagttc
tacatgggcaagttccactccacttgcttcactgtcgacactggtgagcgtgcggcagcg
ttcccctgtggcacggaggccccatccaggatgtgtcctaacggtacagagtgtacagag
tactggatcggccccaactacggcatcaccaactttgacaacatcctgttcgccgtgctc
accgtcttccagtgcatcaccatggagggatgggtggacatcctctacaacgccaatgat
gcctcggggaacacctggaactggctctacttcatccccctcatcatcatcggatccttc
ttcatgctcaacctggtcctgggtgtcttatcaggggagtttgccaaagagagagagcgt
gtggagaagaggcaggactttctgaagctgaggagacagcagcagatagagagagagctg
acggggtacctggagtggatatgcaaggcagaggaggtgctgctggcggaggaggatgag
aacgcggaagagaagtcccctctggacggtgcgtggtacaagaggaaacagaacctccca
gtgttgaagcgaggcaaggtcaagaagagtaagaatgagctgatcggtgctgaggaggga
gacgatcactttactgacatgtcctctgttgttcccccgggctcaccgtttggccgggcc
agcgtgaagagcatgaagctggacagctcatcctacttccgccgcaaggagaggaggatg
cgtttcttcatccgtcgcatggtcaaagcccagagcttctactggacagtcctttgcctg
gtggggctcaacacactgtgtgtggccatcgtccactatgaccaacccgagtggctcacc
actgccctgtacctggcagagtttgtgttcctgggtctgttcctgtctgagatgagcctg
aagatgtacggcctgggagccaggaactatttccattcctctttcaactgcttcgacttt
ggtgtgataatagggagtatacttgaggtggtgtggtcgatgatcaaaccaggggcatcc
tatggcattagtgtactgagggctcttcgtctgctcaggttgttcaagtttaccaagtac
tggaactccctgaggaacctggtggtgtctctgctcaactccatgaagtccattatcagc
ttgctcttcctcctcttcctcttcattgtggtctttgctctgctgggcatgcaacttttt
ggaggacagtttaatttcgaagaggagacgccgacgaccaacttcgataccttcccggcg
gccattctcaccgtcttccagattctgactggcgaggattggaatgctgtaatgtatcat
ggcattgagtctcaggggggcgtgcggcggggaatgttctcctcggtctacttcatcgtc
ctcacactctttggaaactacactctcctgaacgtcttcttggctatcgccgtcgacaac
ctcgccaatgcacaggagctcaccaaggatgaggagaagcaggaggaagaagccaataag
aagctggccctgcagaaggccatggaggtgaaggaggtcagccccgtgtcagcagctaac
atctccatcgctgtttttgtaaagcaaaatcgagatgtactctctcgcagctcgtccgtc
tccagcgtacattcacctaaggagcagcagagagccaataagattatgtcagtgtgggag
cagcgcaccaaccagctgcgtcaaaacaacttgagggccagctcagaggctctgttcaac
gagctggacccagaggaacgcctgcgtgtctcctccgccctccacctgcgccccgatatg
aagacccacaacgaccgccccctagtggtggagccaggcaatggggacaaaccacgaccc
cccaaggaggacagagatggagcagacccccagcaagagggaggagacccctacggtcca
caactccgcaagcaccaccgtcaccgggagaggaacggggagaatggggagagcaggcat
cacacccaccacagccgcagtagggaccactgccacccagacgggccccggcccaaagaa
ggaaaggtggagaggagccatagtcgagaggggggccagggccacaggcaccatcaccag
gctggatccccggaagaaggggtgaacggagggggggaggagagggagcaccgccaccac
cactcccacagacagccccgagagggaaacggggccctggctaacggggccagagtggag
aggaagggccggggtcacaaggaggggaacggagaggggaacggagagaggaggagatac
cgctcccgcatggtcagggcccagtcaactctggatggagaggagtgcagagagaatgga
aagagagatggagactgggaccagggacacagagcttcactggacgctcaaggggagagc
ctggccaccagccctgtgcagcctcctgcaggtctgcaggccggagagaagcaagaggat
gcagacaaccagaagaacagccacagagtcagccaggcaggcctcaacagcaacactgtc
cacatccctgtcaccatcactgccccgcccagagagacaaccatcatacccatgaataac
atagactgcgagagcctccccctgaacgaggagaagaagaacttagaggaggatgaggag
gagctgaagaacggccccaaacacattctaccctacagctctatgtttgtgttcggtcag
accaacccggtgcgtcggctgtgccactacgtggtgaacctgcgttactttgagatgtgt
atcctgtcggtcatcaccatgagcagcatagccctggctgctgaagaccctgtgcaggcc
aatgcaccacgcaataacgtgctcaaatacctggactacgtcttcacgggagtgttcacc
tttgagatggtgattaagatgatagacctgggactactcctccatcctggttcttacttc
cgcgacctgtggaacatcctggactttatcgtggtcagtggagctctggtggcgttcgcc
tgctcaggaactaaaggcaaggacatcaacaccatcaagtcactcagggtgctgcgagtc
ctgaggcccctgaagaccattaaacgactgcccaagctcaaggctgtgtttgactgcgtg
gtcaactctctgaagaatgtgctcaacatcctcattgtctacatgctcttcatgttcatc
ttcgctgtgatcgctgtgcagctgttcaagggcaagttcttctactgcaccgatgagtct
aaaagtctggagaaggactgcaggggtaagtttctggactatgaccgtgatgacgtggct
gcccaggatcgtgagtggagaaagtacgagttccattatgataacgtgctgtgggccttc
ctcaccctcttcaccgtctccactggggagggctggccaatggtcctaaagcattctgtg
gatgccacctatgaggaccagggccccagcccaggcttccgtatggagacctctatcttc
tatgtggtctactttgtggtctttcccttcttcttcgtcaacatctttgtggctctcatc
atcatcaccttccaggaacagggagacaaggccatgtcagagtgtagtctggagaagaac
gagagagcttgtatcgactttgccatcaatgccaagcctctgacgcgctacatgccagct
gacaagcagtcgtttcagtataagatgtggaagtttgtggtgtcgccgccctttgagtac
tccatcatgaccatgatcgcactcaacactgtggtgctgatgatgaagtttcacggtgct
ccggagctgtacgaggccatgctgaagtacctgaacatcgtgttcacagctctcttcaca
ctggagtgcatcctgaagatcatcgcttttggaccactgaattacctgaaggcagcctgg
aatgtgtttgactttgtgacagttttgggaagtatcacggacatcttggtcacagagatt
aagacggacaagctgatcaacctgagtttcctgaggcttttcagggcggccaggctcatc
aagctattgaggcagggctacaccatccgcatcctgctgtggacctttgtccagtccttc
aaggccctaccttacgtctgcctcctcatcgctatgctcttcttcatctatgccatcatc
ggcatgcaggtgtttggaaacattgagctgaatgaggaatcggccatcaaccaccacaac
aacttccagacattctttcaggctctgatgcttctgttcaggagtgcaacaggcgaggcg
tggcatgagatcatgctgtcgtgtctgagtaaccggccgtgtgataaactgtcagggtct
ggagggaaggagtgcggcagtgattttgcttacttctactttgtctccttcatcttcctc
tgctccttcctgatgctcaacctttttgtggcggtcatcatggacaactttgagtaccta
accagagatgcctccatcctggggcctcaccacctggacgaatttatccgcgtctgggcc
gagtacgaccctgctgcctgtggccgtatgacctaccttgatatgcacgagatgctccgc
cacatgtcccctccgctaggtgtgggaaagaaatgcccgcccagaatcgcctataagcga
ttggtcaaaatgaacatgcccatcgccgatgacaatacggtgcacttcacgtccacgctg
atggctctcatccgcaccgctctggagatcaaactggcatctggggtgctggctcagcgc
ctgtgtgatgctgatctgaggaaggagatctccagagtctggcctaacctgcctcagaag
actgttgacctgctggtcacaccatataaaattgatgagttcaatgagctcatatgcccc
tttgcggttgtaaaccgagagctgacagtggggaaggtctatgctgccctcatgatcttt
gactactacaagcagaaccgggccaagaggctggaacagcaactgggacttgacttcaca
gggacaattaagaataaaaagggtgcagccttcttccgccccatgatgcccatgacccat
atgcaggaggagacgccaatcaccactgccaagcccccgcccccctcacaacctgaacca
gagcctcagccagagcccccgcccgtcaccacctctctaaccaatggtgacacagtacca
agccctagaagtgccataaaagagtccatatcaggagatcagctgtctcaggagggccag
cggtccagcactagcagtcggactgtacagcggggccagtcagaggacgtgccctactcc
atcaaacctcaggaaccagtggagatgaggcaggtggagaacggtgctgatttagagggc
tactttggtctggagggccatggcagagcagcctccatgcctagactggactcccagtac
tatcggaaccaccctcgccacctacctgggacctacctggcacctatccctgacatcagt
cctatcaggcggtcggcatccacgttggcttcccagcgcccccaggaggtgagtctgagg
gactacaccctggagacgcctagccaagcccaggccctgtcttcctcagccccaggccag
gcccaagacaggccctaccaccatcaccaccaccaccgctgtcacagacgcagggacaag
gacagggacaagaagcagaagtcactcgacagggcatccagcgtgcagccttctagtata
gcaggtttgcctgctgatcctgccgtggagggcttgtccatggagcgggcgagggagcgt
gaccgaggcaggcctcaggagaggaggcatcactctgctgccggggagaagcagcgctac
tactcctgtgagcgctacggaggcagggagcactaccacaccaagtcagccggaccgagc
cgctccacctcccctggagagacccatgacctaggcctcttcaagcagagtatcggcatg
gctaaaggcagccaagtggtcttaacttcagcgttcagcacgccctgccgtgggcgcaga
cagctcccccagacccccctcaccccccgccccgccgtggcctacaagaccgccaactcc
tcacctgtgcagtttggtgccacggggcacaagtccagtctcagccggggcctctcggag
catagcgccctgctggagtcacccgccatgcccgtcacccgcatcggctcagaccccaac
ctgagcccccagtcgcggggtgcccctccacgcagcctccctgaggagcctgatgacttc
caggacactgtgagcacccatggagggggaggtggacgctcccccaggacctctgcctca
gcttcccatggggctactgagccttcctctgcacctgccccacagggccgggctggggtc
ccaaacgggtaccacttcactctgggggtcaacgcaggttcgagttccagcaccagagga
actgggagcttccgggagaaggaagaggatgactggtgttag
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integrated database retrieval system
