Oncorhynchus mykiss (rainbow trout): 110509421
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Entry
110509421 CDS
T07259
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110509421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110509421
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
110509421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
110509421
NCBI-ProteinID:
XP_036823726
Ensembl:
ENSOMYG00000039365
UniProt:
A0A8C7WCN5
LinkDB
All DBs
Position
Y:31701698..31723025
Genome browser
AA seq
1274 aa
AA seq
DB search
MDALDHMLTDPLDSGEGSDGRITEECMLGNCQVSLPEDLLEDPEIFFSVLSESTWSEVLT
DDQRQHLRQLLPHFQEDNTCEQDSTISKLFNKQNFCFGNPLHLAQKLFQDGHFNPEVVKY
RQLCAKSQKKRQLNSLQQYYHKLLKQILVSRKELLELAVRSGPDIAVNRKYPTQTHGEVQ
EQRVRGRVCRILREVKTECGDSNASSDDDDTASWLPTPQSPSSPTPTVSVRVLPSLSTQD
MKTTDKQELGEKDMRAMLRRHREKRRRQPDHPDLMTSDIRLGDMMSRVNIGRKGSMMTLF
DLALPKRKMREERRKKKMRTIKVESEDPCEALMPLEAPAPSVNITAALPETPVTPLPSVK
EEPMEEVQNSPVMVEEIAVSFFNLLENILKLDGLASTTMLEEKVQQWQTSPASSLNPWFS
SASCWSEMVLPALHFLAGETKVGMLVLPSGFTPYVAFRENSQRWKWIGPSQDGEKDLSAL
CQLWVDSKDLVVVKTECEELTEMTSPTPRVSWTDFVVRPSTGDERHVFQVQEQQRYDQPH
KAFTFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPAYVTILSLVRDAAARLPNG
EGTRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRD
RGQEEFERIHQAQAAAAKARKALQQKPKPASKPKSGSKEGGGKTPGGLEASDVGGPMSPT
PTTPTTSTPGTPKSPLAPVATTPTKAGIPDSVKTSPGVLLVSPPPMPQLGTLLSSSQSGP
QVSQPATSQHTARIVGHQSGTLPQVRVVSSQTAGGQHATLVHQTPHQIRVPVTMGTKGIT
QAVVSLPLRTQSAGSPIQVQASRGQTTLSVSGLTTAVTVLKPQTASPGSPAHNPTSPAVR
QGVTSQNIIKQVAITGQLGIKSQGRPGLPITTTNLRIQGKDVLRLPPSSITTDSKGQTVL
RITPDMMATLTKSPLTTVKLTPDILGTATTKSISATLHVAPPHSTSSPASSSGEVRTSKA
SAGTTTLLKAAGDTIRLMPTLAVTMAEQKTRTFSTVSSSDSKSGTTIRIMPGLGVIPQKQ
GQTITMTTTTGSKPVSTGAATVTIATSGLAGAKGVTVGSSASGSLTLGTATATVRQVPVT
ATVVSTQPGKLPARFTVPLSVLSQPLKSKSVMTTPILKGNLSTNISSLGRNIILTTMPAG
TKLIAGNKPVSFVTAQQLQQLQQQGQATQVRIQTVPAQQLQQRSAAGSPKSMSTVVVTTA
PSPKRAPDPPPPAQ
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggatgcacttgatcacatgctgaccgaccccctagactcaggggagggcagtgatggg
cgcatcactgaagagtgcatgttgggaaactgtcaagtgagtcttccagaagacctgctt
gaggaccctgaaatattcttctctgtgctgagtgaaagcacctggtctgaagtactgaca
gatgaccagaggcagcatctccgtcaactgttaccacactttcaagaagacaacacttgt
gagcaggacagcaccatcagcaaactcttcaacaaacagaacttctgcttcggaaacccc
ttgcaccttgcacagaaactgttccaagatggccatttcaatccagaagtggttaagtac
agacaactgtgtgccaagtcccagaaaaaacgccagctgaactcgttgcagcagtactac
cacaaactccttaaacagatcctggtctctagaaaggaactgctagagttggctgtccgc
agtggccctgacattgcggtgaacagaaagtatcccacccagacccatggtgaggtgcag
gaacagagggtcagaggaagagtgtgccggatactgagggaagttaaaactgagtgtgga
gacagcaatgcctcatctgacgatgatgatacagcctcttggctgccaacacctcaatct
ccttcctctccaacacccacagtctctgtcagggttttgcccagtctctccacccaggac
atgaagaccaccgataagcaagaactgggagagaaggacatgagagccatgctacggaga
catagagagaagaggagacgacaaccggatcatccagacttaatgacttctgacatccgt
ctgggtgacatgatgtctagagtgaacataggtcgtaaaggctccatgatgacactgttt
gacctggctctgcccaagaggaagatgagggaggagaggagaaagaagaagatgaggaca
attaaagtggagtctgaggatccctgtgaggctctgatgcctttagaagccccagctcca
tcagttaacatcacagctgctctgcctgagaccccagtcactccactgcccagtgtcaag
gaagagccgatggaggaggtgcagaacagccctgtcatggtggaggagatcgcagtgagc
ttcttcaacctgctggagaacatcctaaaactagacggcctcgccagcaccaccatgttg
gaggagaaggtccaacagtggcagacatctccagctagttccctgaacccctggttctcc
tcggcctcctgctggtcagagatggtgctgccggccctgcacttcctggctggggagact
aaagtcggtatgttggttcttcccagtggcttcactccctatgttgcgttcagggaaaac
tcacagcgatggaaatggattggtcccagtcaggatggagagaaggatttgagtgctctg
tgtcagctgtgggtcgactccaaggacttggttgtggtcaagacagaatgtgaagaacta
acagagatgacttctcccacccctagagtcagttggactgacttcgtggtgcggcccagc
acaggagacgagaggcatgttttccaagtgcaggagcagcagcggtatgaccagccacac
aaagccttcaccttcagaatgcatggctttgagtctgtggtggggcctgttaagggggtc
tttgacaaggagatgtctctcaacaaagccagagaacacactctgctgcgctccgaccgc
ccagcttatgtcaccatcctctccttggtgcgggacgcagcagctcggctgcccaacgga
gaggggaccagagctgagatctgtgagctgctcaaggactctcaattcctggcaccagat
gtcaccagtgctcaggtgaacacggttgtgagtggggctctggacaggctgcactatgag
aaggacccctgtgtaaagtatgacatcggccgcaagctgtggatctacctgcaccgcgac
cgcggccaggaggagtttgagaggattcaccaggctcaagctgctgctgccaaggccaga
aaggctctgcagcagaaacctaaacctgcgtctaagcctaagtctggaagtaaggagggg
ggtggtaagacccctggaggcctggaagcaagtgatgtggggggtcccatgtccccaact
ccgaccacccccactaccagcacgcctggaacccccaaatcacccctcgcccctgtagcc
acaacccccaccaaagctgggatcccagattcagtcaagaccagtcctggtgttctattg
gtgtctcctccccccatgccccagctggggaccctgttgtccagcagccagtctggcccc
caggtctctcagccagctacctcccaacacacagccaggatagtgggccaccagtcaggc
actctcccacaggtacgagtggtttcttcccagacagcaggaggacagcatgccacactg
gtgcaccaaacccctcatcaaatcagagtgccagtcaccatgggaaccaagggcatcaca
caggctgtggtgtcattaccactgaggacccagtctgctggtagccccatccaggtgcag
gcatccagagggcagacaaccctgtcagtgtcaggcctgaccactgctgttactgtactc
aaacctcagactgcatcccctggcagcccagcacacaaccctacctcccccgctgtccga
cagggagtcaccagccagaacatcatcaaacaggtggctatcacaggccagttgggcata
aagtctcaaggtagaccgggtcttccaataacgactaccaatcttcgcatccagggcaag
gatgtgctccgcctgcccccctcctccatcaccacagactctaaaggacagacggtgctg
cggatcactcctgacatgatggccaccctaactaagtcccctctcaccaccgtcaaactc
acccccgacatcttaggcactgccactaccaagagcatatctgctactctccatgtagcc
ccaccccactccacctccagcccagcctcctcctcgggtgaagtccggaccagcaaggcc
tctgctggcaccaccaccctgttgaaggctgcaggggacactatccgcctgatgcccacc
ctagcagtcactatggccgagcagaagaccagaaccttctccaccgtctcctcgtctgac
tcgaagagtggcaccaccatacggatcatgcccggcctcggggtcatcccacagaaacag
ggccaaaccatcaccatgacaaccaccactggcagcaaaccagtctccactggagccgcc
actgtcaccatagccaccagcggactggccggagctaaaggggtgacggtgggctcttct
gcctcaggctccctgactctgggaacagccacagctactgtccgccaggtccccgtcaca
gccacagtggtgtccacacaaccagggaagttaccagctcggttcacagtgcctctgtct
gtcctcagccaaccactgaaaagtaagagtgtgatgaccacgcccatactgaaaggaaac
ctcagtaccaatatcagcagtctcggcaggaacatcatcctcaccaccatgcctgccggt
accaagctgatagctgggaacaagccagtcagctttgtcacagctcaacagttacagcag
ctgcagcagcagggacaggccacacaggtgcggatccagacggtgccagcccagcagctc
cagcagcgctctgcagcaggctcccccaagtcaatgtccactgtcgtagtcaccaccgca
ccctcacccaaacgggccccggacccgccaccaccagcccagtga
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