Oncorhynchus mykiss (rainbow trout): 110509453
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Entry
110509453 CDS
T07259
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110509453 (supt6h)
03036 Chromosome and associated proteins [BR:
omy03036
]
110509453 (supt6h)
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
110509453 (supt6h)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
110509453 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
S1
Spt6_S1
HHH_9
S1_RRP5
HHH_3
SH2
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
110509453
NCBI-ProteinID:
XP_036824039
UniProt:
A0A8K9WNL8
LinkDB
All DBs
Position
Y:complement(35911028..35950373)
Genome browser
AA seq
1749 aa
AA seq
DB search
MSDFIDSEAEESEEEFEEKDLKPKKTQAFMDDEEEEEELNTEDQDEHGNLMGLIDDDVDE
DEEEEEKKSGGAGSGSDSEDEVRHRRKKRNYDDYLDDDDLDLIEENLGVKVKRRKKKYDR
VKTMDDDEDDEKDQIADEIFHRGDDEDGEGELEEGETVDPPLRRHGERLDEEEEEEGEEE
SDIDDFIVDDDGQPITKRRSKKFSGYTDAALQEAQEIFGGDFDFAEFDADGAYEQGEEEE
EDQDEEGWDRPKKPTKRRVGRKSIFELYEPSELESSHMTDQDNEIRSTDMPERFQLRSIP
VKPAEDDELEEEAEWIYRNAFSTPTISMQESTDYLDRGATTNFSRKGPSTIAKIKEALNF
MRNQHFEVPFIAFYRKEYVEPELNINDLWKVWQWDEKWCQLKSRKQNLTRLFRRMQGYQY
EQISADPDKPLADGIRPLDTADMERLKDVQSIDELSDVYSHFLLYYGRDIPKMQNAAKAA
SKKKKKKKKIEVNEEGEEEEVEEEEEVEEEKGPDLKLASRRDMYSICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPVELAKDYVCSQFNSPEVVLEGTRYMVAMQIAREP
LVRHVLRQTFQERAKINIKPTKKGKKDMDEAHFGYSFKYLKNKPVKELNGDQFLKMCQAE
EEGLLTIDICIDLLGVKGVAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERSLTQF
LYPQMAKELKNKLIAEAKENIIKSCCRRLYNWLKVAPYRPDQQAEEEDDDLMDESQGKGI
RVLGVAFADSRDTPVFCSLINGEGEVVDFLRLPYFLKRRNAWKEDERDKKLQDIENLKKF
LTSKKPHVVAVAGENRDAHMIMEDIKRTVSELEQESSLPAVGVELVDNELAMLYMNSTKS
QTEFRDYPPLLRQAVSVARKIQDPLVEYAQVCSSDEDILCLKLHPLQEHVVKEDLLSALY
CEFINRVNEVGVDVNRAISHPYTQSLVQFVCGLGLRKGSHLLKILKQNNTRLENRTQLVT
MCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDES
AEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRV
PYRAPNTEEVFNLLTKETPETFYIGKLITSVVTGIAHRRPQGESYDQAIRNDATGLWQCP
FCQQDNFPELSEVWNHFDSGSCPGQAIGVRARMDNGVQGFIPTKFLSDKVVKHPEERVKV
GMTVHCRIMKIDIEKFNVDLTCRTSDLMDKNNEWKLPKDSYYDFDTETEDTKTEEERKKK
QQRTTYIKRVIAHPSFHNINFKQAEKMMESMDQGDVVIRPSSKGENHLTVTWKVADGIYQ
HVDVREEGKENAFSLGHTLWINTEEFEDLDEITARYIQPMAAFARDLLGHKYFQDCNGGD
RKKMEELLIRSKKEKPTFIPYFVSACKDLPGKFILGYQPRGKPRVEYVTISPDGFRYRSQ
MFPTVNGLFRWFKDHFQEPVPGITPSSSSRTRTPASVNATPANINIADLTRAVSALPRNM
TSQMFSAIAAVTGQGQGQNANTTPAQWNSSQYGYTGGSSGGGGGSSSAYHVFATPQQPMA
TPMMTPSYSYTTPSQQTMGTPQYPSTPQSSHSHGHTQSNQGHSSHQGPSSNTPSSSSRGR
TPQQQPKSSGSTAVDWGKVAEQWLQEKEAERKKQKTPRMTPRPSPSPMIQSTPMSIAGDA
TPLLDEMDR
NT seq
5250 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcatcgatagcgaggctgaggagtcggaggaggagtttgaagagaaagac
ctgaagcctaaaaagacccaggcgtttatggatgatgaggaagaggaggaagagttaaac
acagaggaccaggatgagcacgggaacctgatggggctcatcgacgatgatgtggatgaa
gatgaggaagaggaagagaagaaaagcggaggagcaggcagcggcagcgactcagaggat
gaagtcagacacagacgcaagaaacgcaactatgacgactatctggatgatgatgacctg
gacctcattgaggagaacttgggagtcaaagtcaagaggaggaagaagaagtatgaccgt
gtgaagactatggatgatgatgaagatgacgagaaggaccagatcgcagacgagatcttc
cacagaggagatgacgaggacggagagggggagctggaggagggagagacagtcgacccg
cccctacgtcgccatggtgaacgcctcgacgaggaagaggaagaggagggagaggaggag
tcagatattgatgactttatcgtggacgacgatggccagcctatcaccaagaggagaagc
aagaagttctcaggatacacagatgcagccctccaggaagctcaggagatcttcgggggc
gactttgactttgcggagttcgacgccgacggtgcttatgaacagggtgaggaagaggag
gaggaccaggatgaagagggctgggaccggcccaagaagccaacgaagaggagggtgggg
aggaagagcatcttcgagctctacgagcccagcgagctggagagtagtcacatgactgac
caggacaacgagatccgctccacagacatgccagagaggttccagctgcgctccatccca
gtgaagcctgctgaggatgatgagttggaggaagaggcagagtggatctacagaaacgct
ttctcaacccccaccatctccatgcaggagagtacagattacctggacagaggagccacc
actaactttagcaggaagggccccagcaccatcgccaagattaaggaggccctcaacttc
atgaggaatcagcattttgaggttccattcatcgccttctacaggaaggagtacgtagaa
ccggagctcaacatcaacgacctgtggaaggtctggcagtgggacgagaagtggtgccag
ctgaagagcaggaagcagaacctgacacgtctgttccggaggatgcaggggtaccagtat
gagcagatatctgccgaccccgacaagcccctggctgacggcatcaggcccctggacact
gctgatatggagagactgaaagatgtccagtccatagatgagctgagtgacgtgtatagt
cacttccttctgtactatggccgagacatccccaagatgcagaacgcagccaaagctgcc
agcaagaagaagaagaagaagaagaagattgaggtcaacgaggaaggtgaggaggaagag
gtggaggaagaggaggaggtggaggaagagaaggggccggacctgaagctggcatctcgt
agagacatgtacagcatctgtcagagcgctgggctcgatggcctggctaagaaatttggg
ctgactccagagcagtttggagagaatctgagagacagctaccagcgtcacgagacagag
cagttccctgccgagcctgtggagttggctaaagactacgtctgcagccagtttaacagc
cctgaggtggtgttggaggggactcgttatatggttgcgatgcagattgccagggagcct
ctggtcagacacgtcctcagacagacgttccaggagagagccaagatcaacatcaagccc
accaagaagggaaagaaggacatggacgaggcccactttggctactccttcaagtacctg
aagaacaagccagtgaaggaactgaacggagaccagttcttaaagatgtgccaggctgag
gaggaggggcttctcaccatagacatctgcatcgatctcctaggggtcaaaggggttgca
ggtgaccagacatactttgatgagatcaagcagttttactacagagatgagttcagtcac
caggtgcaggagtggaacagacagaggaccctggccatcgaacgctccctcacacagttc
ctgtaccctcagatggccaaggaactcaagaacaaactcatcgcggaggccaaggaaaac
atcatcaagtcatgttgcaggaggctgtataattggctgaaggtggctccttacagacca
gaccagcaggcggaggaggaggatgatgatctgatggatgagagtcaaggaaaaggcatc
agagtcctgggagtggccttcgcagacagcagagacacgccagtgttctgttcactgatc
aacggagagggagaggtcgtggacttcctccgtctgccctacttcctgaagaggaggaac
gcatggaaggaggacgagagagacaaaaagctccaggacattgagaacctgaagaagttc
ctgaccagtaagaagcctcacgtggtggctgttgccggggagaatagggacgcccacatg
ataatggaggacattaagaggacagtgagtgagttggagcaggagtcttctctgcctgct
gtgggagtggagctggtagacaacgaactggccatgctctatatgaacagtaccaaatct
cagactgaattccgtgactaccctcccctgctgcgccaggctgtgtcagtagccaggaag
attcaggatcctctagtggagtacgctcaggtctgcagctcagacgaagacatcctctgc
ctcaaactacaccctctacaggagcatgtagttaaggaggacctgctgagtgctctgtac
tgtgagtttataaaccgggtcaacgaggtgggggtggatgtgaacagagccatctctcac
ccctacacacagagcctggttcagttcgtctgtggcctcggactcaggaagggatcccac
ctgctcaagatcctgaagcagaacaacactcgtctggagaacaggactcagctggtcact
atgtgtcacatgggccccaaggtcttcatcaactgtgccggcttcatcaagatagacacc
gcctctctcggagacagtactgactcatacatcgaggttctggatgggtcccgggtgcac
ccggagacatatgagtgggccagaaagatggcggtggacgctctggaatacgacgagtca
gcggaggacgccaacccggccggagcgctggaggaaatcctggaaaacccggagcgcctc
aaagatctggacctggatgcttttgctgaggaactggagagacagggttatggtaacaag
ggcatcaccctgtatgatatccgtgctgagttgagctgcaggtataaggacttgagagtt
ccctacagagctcctaacaccgaggaggtgtttaacctgcttaccaaggagacaccagag
accttctatataggtaagctgatcaccagtgttgtgaccggtatagctcaccggcgcccc
cagggggagagttatgaccaggccattaggaacgacgctacagggctgtggcagtgcccc
ttctgtcaacaggacaacttccctgaactcagcgaggtgtggaaccattttgacagtggt
tcgtgtcctggccaggctataggtgtgagggctcggatggacaacggtgtccagggcttc
atccccaccaagttcctcagtgacaaggtggtcaaacaccctgaggagagggtgaaggtg
ggtatgacggtacactgtcgcatcatgaagattgacattgagaagttcaacgtggacctg
acatgtcgtacgtctgacctgatggataaaaacaacgagtggaagctccctaaagacagt
tactacgacttcgacacggagacagaggacaccaagacagaggaggaacgcaagaagaaa
cagcagagaaccacctatataaaacgtgtgattgcccacccatccttccacaacatcaac
ttcaagcaggctgagaagatgatggagtccatggaccagggagatgttgttatcaggccc
agcagcaagggagagaaccaccttactgtcacctggaaggtagctgacggcatctaccag
catgttgatgtgagagaggagggcaaggagaacgccttcagcctgggacacacactctgg
atcaacactgaggagtttgaggatcttgatgagatcacagctcgttatattcagccaatg
gcagcgttcgctcgtgacctgctgggacacaagtacttccaggactgtaacggaggggac
aggaagaaaatggaggagttgttgatcaggtctaagaaggagaagcctacgttcataccc
tactttgtctcagcctgtaaagacctgccagggaagttcatactgggataccagcctcgt
ggcaaaccacgtgttgagtatgtgaccatctctcctgacggcttccggtaccgctcccag
atgttccccaccgttaacggactgttccgctggttcaaagaccacttccaggaaccggta
ccaggcatcacccccagcagtagcagtcgaacacggacacctgcctctgtcaacgctaca
ccagctaacatcaacatcgcagacctgacgcgagcggtcagcgctctcccacgcaacatg
acctctcagatgttcagtgccatcgccgcggtgacggggcaggggcagggccagaacgct
aacactacgcctgcccagtggaactccagccaatacggttacaccgggggcagcagtggg
ggtgggggaggcagctcctcagcctatcacgtgtttgcgacgccccaacagccgatggcg
acacccatgatgacccccagctactcatacaccacccccagccagcagaccatgggtacc
ccgcagtacccctccaccccccagtcctcccactcccatggacacacacagagcaaccag
ggccacagcagccaccagggaccctcgtccaacactccctcgtcctcctccagaggacgc
actccgcagcagcagcctaagtcgagcggcagcacggcggtggactggggcaaggtagcg
gagcagtggctccaggagaaggaggcggagaggaagaagcagaagacccccaggatgacc
ccgcgaccttcccccagccccatgatccagagcacgcctatgtcaatcgctggagacgcc
acgccccttctggacgagatggaccgatag
DBGET
integrated database retrieval system
