Oncorhynchus mykiss (rainbow trout): 110509466
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Entry
110509466 CDS
T07259
Symbol
supt20
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110509466 (supt20)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110509466 (supt20)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
110509466 (supt20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
110509466
NCBI-ProteinID:
XP_036823882
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Position
Y:complement(40828615..40869776)
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AA seq
834 aa
AA seq
DB search
MQHVLEYALDRAEYIVESARQRPAKRRASSGGKKSLYQKLYELYIEECDKEPELKKLRRN
VNLLEKLMCQESVSSLVVNLYPGNQGYSLMLRGKNGSDSETIRLPYEEGQLLEYLDAEEL
PPILVDLLEKSQVNIFHCGCVVAEVRDYRQSGNTKMPSFQSRHVLLRPTMQTLICDVHAM
TSDHHKWTQDDKFQLESQLLLATADPLCLDPSISVTCTANHLLYNKQKMNTHSMKRCFKR
HSRAALNRQQELSYLPMPPQLRLYDYLQRRKERKPAPSIDLKISKAGNCVDMWKQSNCQL
TVPKEIDVEKYAVVEKSVKLEESQPTVWPAEEVIDDYTFECEVGGKTQRTKVSIFQSVGD
PLVYGKIYCAKQPKVEEDSSDLQLLHPSFLIGSKIDASRFLSQYKGVYESDVKCQVKMSH
NSGFVGRNRLSPSRETEADGLSALVQSSGVLGKGVKHRPPPIKLPSASGSSSTGNLYSSA
QATSGLLKCPTPPPGTGPGSAKPQSLSRKHSVELGQGLQLGGQLGQVGLLSPVALSPMGT
TQRSVTPKPSTPTSTPCSTPHPPDSLLSLCPLPSSVTPTPLEPQALLAPYPQQQQLSLSQ
ALPVMTIPLPTMGTSITTGTSSSQVMANPAGLNFINVVGSVCSPQTLMNSSQMLGPGLNL
SGLGGLMPTMQPTTQTGSPFGLNTSPGLRPLNLLQIPTGPLIFNSLQQQQLSQFSPQQSQ
SATSSPQQQGDMGDQGSDQGMGAQQTAVINLTGVGGFKSPQTAVLSQLGCGLDGSGPPLP
SPRLQQPQIQLQFLHQMQQQMAMRGAGPPGVSPRLHTASQPRSKRKRSTPQPHP
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgcaacacgttttggaatatgcattggatcgggctgagtacattgttgaaagtgctcgt
caaaggccagcgaagaggagagcctcatccggagggaagaagagtttataccagaaacta
tacgagctctacatcgaagagtgtgacaaagaaccagagctcaagaagctgcgtaggaat
gtgaacctgctggagaagctaatgtgtcaagagtcagtgtcgagtctggtcgtcaacctc
taccctggcaaccagggatactccctcatgctccgcggcaagaatggatctgactctgag
acgatccgtctgccgtatgaggaaggccagctgttggagtacctggatgctgaggagctt
ccccctatcctggtggatctcttagagaagtcccaggtgaacatcttccactgtggctgt
gtggtagctgaggtccgagactacagacagtctggcaacactaagatgccctccttccag
agcagacacgtcctgctacggcccaccatgcagacactgatctgtgacgtccatgccatg
accagtgaccaccacaaatggactcaggatgataagttccagttggagagccagttactg
ctggccacagctgatcctctgtgtctggatccatctatctctgtcacctgtacagccaac
cacctgctctataacaagcagaagatgaacactcactctatgaaacgttgttttaagcgt
cactctcgggcggcgttgaaccgtcagcaggagctgtcctacctgcccatgcccccccag
ctgcgtctctatgactacctgcagaggaggaaggagaggaagccggccccctcgatagac
ctgaagatctccaaggccggaaactgtgtggacatgtggaagcagagcaactgccagctg
actgtccccaaggagattgatgtggagaaatacgcagtggtggagaagtctgtgaagctg
gaggaatctcaacccactgtatggcctgcagaggaagtgatagatgactatacgtttgag
tgtgaggttgggggtaagacccagaggaccaaggtgtccatcttccagtcggtgggcgac
cctctggtctacggaaagatctactgcgccaaacaacccaaagttgaggaggacagcagc
gaccttcagctcctacacccatctttcctaataggctcaaagatagatgccagtcggttc
ctgtcccagtataagggtgtgtatgagtcagacgtgaagtgccaggtgaagatgtctcat
aactcaggattcgtgggacggaaccggctctcacccagcagagagacagaggcggatggt
ctatcagccttggttcagtcgtcgggtgtgttggggaagggggtgaagcaccggcctccc
cctatcaaactaccctccgcgtcgggcagcagctccacgggtaacctgtatagttcagcc
caggctaccagtggtctccttaagtgtcctacgcctcccccaggaacaggccccggctca
gccaagccccagtcactgagtaggaagcactctgtggagctggggcaggggttacagctg
ggcgggcagttaggacaggtggggttgttgtccccggtagccctatctcccatggggaca
acacagagatcggtgaccccgaaaccctccacccccaccagcaccccctgttccacccct
cacccccccgactccctcctctccctctgtcccctcccgtcctctgtcaccccaaccccc
ctggagccccaggccctcctggctccgtaccctcagcagcagcagctgtccctgtcccag
gctttgcctgttatgaccatccctcttcccaccatgggaacctccatcacaacggggacc
agctcctctcaggtcatggctaaccctgctggactcaacttcatcaacgtggtgggatct
gtctgcagtccccagactctgatgaattctagtcaaatgttgggtcctggtctcaacctg
agtggtctaggaggactgatgcctaccatgcaaccaaccacacaaacagggagtccattt
ggtttgaacactagtccaggccttagacccctcaacctgctacagatccctacaggtcct
ctgatctttaactctctgcagcagcagcagctctcccagttctctcctcaacagagtcag
tctgctacgtccagcccacagcagcaaggagacatgggtgatcaggggtcagaccagggt
atgggtgctcaacagactgctgtcatcaacctgactggagtaggaggctttaagtcccca
cagacagcagtgctgtcccagttaggctgtggtctggatggctctggtccccccctgcct
tctccaaggcttcagcagccgcagatacaattgcaattcttgcaccaaatgcagcagcaa
atggctatgaggggggcggggcctccgggggtgtcgccacggctacataccgccagccaa
ccaagaagtaagaggaagaggagcacaccgcagccccacccctaa
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