Oncorhynchus mykiss (rainbow trout): 110509476
Help
Entry
110509476 CDS
T07259
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110509476
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
110509476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THSD1_D3
THSD1_N
THSD1_D2
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
110509476
NCBI-ProteinID:
XP_036823816
UniProt:
A0A8K9WTW1
LinkDB
All DBs
Position
Y:45544929..45620110
Genome browser
AA seq
1019 aa
AA seq
DB search
MPQGSTPTPLLVFLLATLGYAMAGLHLWPSVHVALSNSSVFLNYDTADHNASSDIRNMTL
TLVDTETNATLLTRTLPANQSEGRLEFNCSCFLYAGTFRFCLEQIDYATANANANSNANA
SVTDRDWNAVVTTTATWWWSSELQVEWPTFHIAVDRASNQSGSFQVGISTNELFKSCSSG
LGSALFLEVSYLEFNQIGRNSIDKVRARTRHPIKELHSQTVDLLCAFHFTERDFIRVALR
SPHTNQDVKSSGPLYLSRIFSYKLLVDNINSYRSGCEGAISVRLVTPPCALISGKVLLFR
DGGVGSEGKGGTGAGGAGEGGVGAEGPPPSVPLAFNWLTQGENETEFNCSVFDPGRNKYC
FRFVLNFSRSPSPAQTCLVVNRNAESWGVWQAWSVCSVSCGEGVRERVRECLLPSGGGSM
QCTGMVKEQSLCSLEDCTVLPAPSPSLPPPPASSLLGGNLVVVAGISLCLAVILATILVT
LWRKLCRTPQCSSVRRGSMHSPGGRKLSDEASICGNSLQRPSLSDSQGGTGPGLAQNERP
NLGCKPLPQPPPLVIPLVQDPDRLSPSGQKVLPPIFGYRLAQQQLKEMKKRGLKEATQLY
HVSQSPVHDTLLEDSPTSTPTQPGFTLPGLGPNPSPLDLQEEDSNLSRFRITAPFPEHRV
PQRSSVTLPDRLSPRVELVLGPPVAGYMREGRGGGGGSSQRRDRTADWVEMVERTGLGGM
GGGGVPSNSYQKNPNCRRTSSFHDTKPPPPPAAPCRPHRERSQTQVGPRTRTLPEGSCRT
RGTLETQNPAYPIPEQSTPDWARPEPRPLWPGDDRRRPWVETGCPLFSSNKPKHAENNNT
YLISDPKHTETNTTTAAMLGSELLSNTELTLERERRRIGDRREGGEDRGEKGGTSGIGGP
GLGPGVGSRGCPAYLTPDRAERAEHNWNRRGPSPIQRNILARKLREAQSCNTASDQQGRH
NQQQQRQRSSTFSVSASEQRKGRCRSLPLSGDSPYGLTEAEQCMLDLDMTSLYLGEDEF
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgccacagggttccacgccgacaccgctgctcgtcttcctattggccacgctgggatac
gctatggctggcctccacctgtggccctccgtccatgttgcacttagtaacagcagtgtg
ttcctcaactacgacaccgcagaccacaacgcttcctccgacatccggaacatgacccta
actctggttgacacggaaaccaacgccaccctgctcaccagaaccctgccagccaaccaa
tcagaggggagattagaattcaactgctcctgtttcctgtacgctggaacattccgcttc
tgcctggagcagattgactacgcaaccgccaatgctaatgctaacagtaatgctaatgct
agcgtaacagatagagattggaatgcggttgttactactactgccacctggtggtggagc
tctgagcttcaggtggagtggccaacctttcacattgccgtggaccgagccagcaaccag
tcaggatccttccaggtggggatctcgaccaatgagctgttcaagtcctgctcctctggc
ctcggttccgccctcttcctggaggtcagttacctggagttcaaccagattggtcgaaat
agcatcgacaaggtccgcgcccgcacccggcacccaatcaaagagctgcattctcagacg
gtggatctgttgtgtgcatttcatttcacagagcgagacttcatcagggtggcgctgcgc
tcccctcacacaaaccaggatgtcaagtcatctggccctctctacctctccaggatcttc
tcctataagttactggtggataacataaactcctacaggtcaggctgtgagggagcgata
tctgtacgcctggtgacccctccctgtgctctgatcagcggcaaggtcctcttattccgg
gacggaggtgtggggtccgagggaaaggggggcacaggggcggggggagcaggtgaaggg
ggtgtaggggcagagggcccgcccccctccgttccactggcgtttaattggctgacacag
ggggagaacgagacagaattcaactgttcggtgtttgacccaggaaggaataaatactgc
ttcagatttgtgctcaacttcagccgctccccaagtccagcacagacctgcctggtggta
aacaggaacgcagagtcatggggtgtgtggcaggcgtggagcgtgtgcagtgtgagctgt
ggagagggggtgagggagagagtgcgagagtgtctgctgccctccggtggtggaagtatg
cagtgcaccggcatggtcaaggaacagtctctctgctcactggaagactgtacagtcctt
cccgctccctctccgtccctcccgcctcctccagcctcctccttactcggtggtaacctg
gtagtcgtggccggtatatccctgtgtctggcggtcatcctagcgaccatcctggtcacc
ctgtggcgtaaactctgccggacaccccagtgtagctcggtccgccgcggatcgatgcac
tcgcctgggggacgtaaactctctgacgaggcctccatctgtgggaacagcctccagaga
cccagcctctccgacagccaggggggcacagggccagggctagcccagaacgaaaggcct
aacctggggtgcaaacctctgcctcaaccccctcctctggttattcccctggttcaggac
ccagatagactgtctccatcgggacagaaggtgctaccgccaatcttcgggtatcgtctg
gcccagcagcagttaaaagagatgaagaagagaggtttaaaggaagccacccagctctat
cacgtctcacagagccctgtccacgacactcttctggaggactcgcccacctccactcct
acccagccagggttcaccctccctgggctcggccccaaccccagccccctggacctccag
gaagaagattctaatctgagccggtttcgtatcaccgcccctttccccgagcacagggtc
ccacagcgcagctcggttactctgccagacagactgagccccagggtggagctcgtcctg
gggcctcccgtggccggatacatgagagaaggtaggggaggaggtggcgggagctcccaa
cgacgagaccgcacggcagactgggtggagatggtggagaggactgggttaggagggatg
ggtggaggaggcgttccctccaactcgtaccagaaaaacccaaactgcagacggacatcc
agctttcacgacaccaagcccccacctcctccagcagccccatgtcgcccccacagggag
aggagtcagacccaggtgggtccccgcaccaggaccctccccgagggcagctgtaggacc
cgaggaaccttggagacccagaacccagcctatcccatcccagagcagagcacccctgac
tgggcaaggcccgaaccgcgacccctttggcctggggacgacaggagaagaccctgggtg
gagactggatgtcctctgttttccagtaacaaacccaaacacgctgaaaacaacaacacc
tacttgatctctgaccctaaacacacagagaccaacactacaacggcggccatgttagga
tctgagctgcttagcaacactgaactcaccctggagagggagaggcggaggattggtgat
cgaagagaaggtggtgaagatagaggagagaaaggtgggacttcaggtataggtggacca
ggattaggaccaggggtggggtctcgtggctgccctgcttacctcaccccggaccgggca
gagcgggcagaacacaactggaaccgtcgaggcccttccccgattcagagaaatatcctg
gccaggaagctgagagaagctcagtcttgcaacaccgcctccgaccagcaggggcgccat
aaccaacagcagcagaggcagcgcagctccacatttagcgtgtctgccagtgaacaaagg
aaggggaggtgcaggtctcttcctctgtctggggactccccctatggactgactgaggca
gagcaatgcatgctggatctagatatgacctcgctatacctgggagaggatgaattctga
DBGET
integrated database retrieval system
