Oncorhynchus mykiss (rainbow trout): 110509575
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Entry
110509575 CDS
T07259
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110509575
Membrane trafficking [BR:
omy04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
110509575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
SOS1_NGEF_PH
PH_13
C1_2
PHD_2
PHD
Motif
Other DBs
NCBI-GeneID:
110509575
NCBI-ProteinID:
XP_036823980
LinkDB
All DBs
Position
Y:7525042..7636893
Genome browser
AA seq
1817 aa
AA seq
DB search
MELNRGEVPLYGQLEVCALLQVPDLEPEQTEFYVVLEGSRLAHVTVGKRTEDGKSLCFTV
PGHDLQETVSVTAYCHTEGRAQPCGGGASLDYVSDLPQEVAEHLLANSDCLSPQSHLEVL
RRVSAAPGEGNKEGDRSAGSVLSYLGKTDQEDGYGGGRPRPDPEVECRLREMDERITQAM
ANLDYPLEWSGKASQPREEHQSRDTLLHLSVRLGLLSLSRFLIGQPRGQRALTLPNEEGA
TPLQLAQNGGDHTLFMALTTPPVPVGVCTVWADRTCVLRVCPGSGTLNLTFLGGPESSVM
DNILVLREKLTDHNILRQISALRGDVDVQMEDSGRADVHASDTSDGGLGRGLPVEDLTLV
VRVLEEQLVLSLDDDEELPTLQTVKSQTTHPRRTQRQFSHSAVADKSASIINGRSQLSTE
VDDLKTKVSVAGVMRDSSVTDSRVWDTVDSEVLLQQATVTPPPRPPYGLEEQQSPFVSSS
PLSSPADRALTRLNSLSHSYLTNQRGSPPLESPNLSPSLVALVIDSEEEGVLEKSPFSPL
TFDPRSSGDDTAPDLTCTRTHSASSVGDPTPTKDMGDQKIRHRSYSYSSPKISLLPSRFS
RDTSAQPATSDLSPERREFSLSKQPQEKRLSSLHQDYMVGCWATEGCLCRGVPGCLHIKK
RGGRELKFRKRAQSADDEGSVELAESLQHLTLSEFLKEIEEEEWDKYNIPSKVASEKYKV
IRTFSFLKSRMSSTRNKNKGKEKEREKEERDKDRQQNGHRFSTGSCAGPTVCLVCDKPAT
GKELLHCSSCTLMVHKGCNDFAPPCLKKLVKNRTASLPQMRDSPSSCLIATSASLPMMSQ
RDRRETASLPNPLSSSVPSSTDSRLSESPEVVSDRRWSPGRSEELLQTTESSSSTDSSLG
EDCVDTGLHSDLAADALDYEAESWSLTVEHKFCKKQDKRVVKRQDVIYELMQTEMHHLQT
LCIMAEVFRRGMREEVQLDAGAVGRVFPCLDELLLLHHDLFNPMRERRHSSARPYGNRNY
VIERIGDVLLLQFSEENAERMKQVYGDFCSHHTEAVTFFKELQQHNKRFQTFIKQQSNNY
LVRRREIPECILLVTQRITKYPVLLERILQYTQEDSEEHRDLSRALVLIKEVIAAVDLRV
SEFEQGQRLQDVLNRMDNRSAAKLKNGHTFRKQDVLVPGRTLKHQGLLLWKTATGRLKDV
LALLLTDTLIFLQEKDQKFIFAAVDQKPPVISLQKLIVREVANEERGMFLISASAAGPEM
YEVHTSSKDERNTWMRHIREAVESCPEDEEENTSESEEERRASEARAQKIQRLQENLSSQ
DHQICSTLVEKLQIYADLSALRGGTQEQHPEPRLLVQPHPEEVPRAAVLLTAALREAENL
RTTLSSRTCSPSSLCSPHRDPLSHPVSLANPPTPMDNPTDGEASPGDPDTRDGEWSASQG
LVLQSLTQPHTGDTNNINLKVAQSVQSLTQLLYSLQAAVTIQDSFYEVQKLLLRESDRSG
PCPPRPHPPCLQEQEKHRNQEKRREEVAAAVRLQGQLRQERQRWEKECQLRHSQQGELES
RLEERERQCHLEAERLKQEWEELEEQLGEYQHSLERLREGQRSVGKERERLETQQKLLQS
WRHSRQRSLPVMVIPLDGHQDSLPGQSGVHLDNAGSVFVNEAAFTTSKVLNNRHMHHHIQ
QHQRGGTLGYGDDPRAHNSLNTILARSSQRHTLQPLSLSKAPTLHPDTNTPQCWAGGAGV
TRYLYTTSGGQGTEHTPNDINTHSYVRETWSSTATVAGQYQGAPHHGDHQLVLSSLVPLE
TDSGDGEEGGEENIVYL
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atggagttgaacagaggagaagtgcctctatatggccaattggaagtgtgtgctcttctg
caggttccagatctagaaccagaacagacagagttctatgtggttttagaaggttccaga
ctagcccatgttactgtagggaagagaacagaggatggaaagtctctgtgcttcactgtt
ccaggtcatgaccttcaggagactgtctctgtcacagcttattgccacacagagggcaga
gcccagccctgtggaggcggggcctcgctggactacgtcagtgatttgccacaggaagtg
gccgagcacctgctagccaatagcgactgtctgagtccccagagccacctggaggtcctg
aggagggtttcagcagctccaggggaggggaacaaggagggtgacaggagtgctggctca
gttctctcctatctggggaagacagaccaggaggatgggtatgggggtgggagacccaga
cctgatccagaggtggagtgtcgtctcagggagatggatgagaggataacccaggccatg
gccaacctggactaccctctggagtggagcggcaaggccagccaacctagagaagagcac
cagtccagggacactctcctccacctctccgtgcgcctgggtttgctcagtctatcccgc
ttcctgattggccagcccaggggtcagagggcactgaccctgccaaatgaggaaggggcc
acacccctccagctggctcagaacggaggagaccacaccctctttatggcgcttaccacc
ccccctgtccctgtcggggtgtgcactgtgtgggcagataggacttgtgttctaagggta
tgtcctgggtctggcacccttaaccttaccttcctggggggccctgagagcagtgttatg
gacaacatcctggttctcagagagaaactgacggaccacaatatcctcagacagatctca
gcactgagaggtgatgttgatgttcagatggaggacagtggcagagcagatgtccatgca
agtgataccagtgacggaggtctaggcagggggctgccagtagaagaccttacactggtg
gttagagttcttgaagagcagcttgttctctctctggatgatgatgaggaacttccaaca
ttacaaacagtgaagtcccagacgacccaccccagacgaacccagagacagttctcccac
tctgctgtggcagacaaatcagcctccatcatcaatggcaggagtcagctctccacagag
gtggatgacctcaagaccaaggttagtgttgccggggtaatgagggacagctctgtgact
gacagcagggtgtgggacacagtggactcagaggtcctcctccaacaggccaccgtcacc
cctccaccccgacctccctacggactagaggagcaacagtcccccttcgtctcttcttct
cccttgtcctcccctgctgaccgagccctcacccgactgaacagcctttcccactcatac
ctaaccaatcagagagggagcccacctctggagtcacctaacctcagccccagtctggta
gctctagtgattgacagtgaggaggagggggttctggagaagtctcccttctctcctctt
acctttgaccctcgtagcagcggggacgacaccgccccagacctcacctgcacacgcaca
cactctgcctcctcagtcggtgaccccacccccacaaaggatatgggcgaccagaagatc
agacaccgctcctactcctactcctcccccaagatcagcctgctgccctcccgcttctcc
cgtgacacctcagcccagcctgcgacatctgacctcagcccagagcggagagagttcagc
ctatcaaagcaacctcaagaaaaaaggctctccagccttcaccaagactacatggttggt
tgctgggcgaccgagggctgtctctgtcgtggagttcctggttgtcttcatatcaagaaa
aggggtggcagggagttaaagttccgtaagcgtgcccagtctgccgacgacgagggcagc
gttgagctggcagagtccctccaacacctcaccctctcagagttcctcaaagaaattgaa
gaagaggagtgggacaagtacaacatcccttccaaggtagcgtcagagaaatacaaagtg
attcgtaccttcagcttcctcaagagccggatgtcgagcacacgcaacaagaacaagggg
aaggagaaggaaagggagaaggaggagagagacaaggacaggcagcagaatggacatcgc
ttctccacggggtcctgtgctggacccacggtctgtctggtctgtgacaaacctgctact
ggcaaggaacttctgcactgctccagttgtacactcatggtccataagggttgtaatgac
tttgctcccccgtgtctaaagaaacttgtgaagaaccgaacggcatctctcccgcagatg
cgagacagtccctcttcatgtctgatcgccacctcagcctctctacctatgatgagccag
agggacaggagggaaacagcctccctccccaaccccctctccagtagcgtcccgtcttcc
actgacagcaggcttagcgagagtccggaagtggtgtctgacaggagatggagtcctggc
cgatcagaggagctcctacagaccacggagtcatcctcctccactgactcctccctcgga
gaagactgtgtggacaccggtctccacagcgacctggctgctgatgctctggactacgag
gctgagtcttggagtctgacagtggaacacaagttttgtaagaagcaggacaaacgggtg
gtcaagagacaggacgtcatctacgagttgatgcagacagagatgcaccacctccagact
ctgtgcatcatggctgaggtcttccggcgagggatgagggaggaggtccagctggacgcg
ggcgccgtggggcgtgtcttcccctgtttggacgaactcctcctcctccaccacgacctc
ttcaaccccatgagggaacgccgccacagctctgcccggccatacgggaacaggaactac
gtcatagaacgcatcggagatgttctgctgctacagttttctgaagagaacgcagagagg
atgaaacaggtgtatggagacttttgcagccatcacactgaggcagtcaccttcttcaaa
gagctacagcaacacaacaaacgatttcagaccttcatcaagcaacaaagtaataactat
ttggtgcggaggagagagatcccagaatgcatcttgttggtgacccagaggataactaag
taccctgttctgttggagaggattctacagtacacccaggaggacagtgaggagcacagg
gatctctccagagctctggttttgatcaaggaggtgatcgcggctgtagacctgagggtc
agtgagtttgagcagggtcagaggttacaggacgtcctaaaccggatggacaaccgtagt
gctgccaagctgaagaatggacacacctttaggaagcaggatgttctggtgccaggccgg
accctcaaacaccagggcctgttactgtggaagaccgccaccggacgactcaaagatgtc
ctggctctccttctcaccgacacactgatcttcctacaggagaaagaccagaagttcata
ttcgctgctgtggaccagaagcccccagtgatctccctgcagaagctgattgtcagggag
gtagccaatgaggagagagggatgtttctgatcagtgcatcggccgcgggtccagagatg
tacgaggtccacacctcctcgaaagacgaacgcaacacctggatgagacacatccgagag
gctgtggagagctgtccagaggatgaggaggagaacactagcgaatcagaggaggagaga
agagcatctgaagccagagcccagaagatacaaagactacaggagaacctgtccagtcag
gaccatcagatatgttctactctggtggagaagctacagatctatgctgatctgtctgcc
ctgaggggcggcacccaggaacagcaccctgagccacgcttactggtccagccacaccca
gaggaggtgccccgggctgcagtactgctcactgccgcgctccgagaggctgagaacctg
aggaccactctgtcctccaggacctgttctccctccagcctctgcagccctcacagggac
cccctgtcccaccctgtgtccttagccaaccctcctacccccatggacaaccccacggac
ggcgaagcctcacctggggaccctgataccagagacggggagtggtcagcctcccagggc
ctcgtactacagtccctgactcaaccccacaccggggacactaataatatcaaccttaag
gtggctcagagtgtccagagcttgacccagttactctacagtctgcaggcagcggtaacc
atccaagacagtttctacgaggtacagaagctcctcctccgtgaaagtgaccgctccggc
ccctgcccgccgagaccacaccccccgtgtctccaggagcaggaaaagcatcgtaaccag
gagaagcgccgtgaggaggtggcggcggcggtgcggttacagggtcagctgcgccaggag
aggcagcggtgggagaaggagtgccagctgcgccacagccaacagggggagctggagagc
aggctagaggagagggagagacagtgtcacctggaggctgagaggctgaagcaggagtgg
gaagagctcgaagagcagctgggggagtaccagcatagcctggagaggctgagggagggc
cagagaagcgtggggaaggagagggagaggctggagacccagcagaagctgctgcagagc
tggagacacagccgacagaggagcctgcctgtcatggtcataccgctggatggtcatcag
gactcacttcctggtcagtccggcgtccatcttgacaacgccggctcagtgtttgtcaac
gaagcagcgttcaccacgtcgaaggtgcttaataaccgccacatgcaccaccacatacag
cagcaccagagaggtgggaccctggggtacggagatgaccctcgagcccacaacagcctg
aacaccatactggcccgctccagccagagacacacgctccaacccctctccctctccaag
gctcccacactccaccctgacacaaacacaccccagtgctgggctgggggtgccggtgtc
actaggtacctctacacaacctcaggtggacaggggacagagcacacacccaacgatata
aacacacacagctatgtgagggagacgtggtcctcgacggcaactgtggctggacagtat
cagggtgcacctcaccatggcgaccaccaactggtcctctcctccttggtccccctggag
acggatagtggggatggggaggaggggggagaggagaacattgtgtacctctga
DBGET
integrated database retrieval system
