Oncorhynchus mykiss (rainbow trout): 110509602
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Entry
110509602 CDS
T07259
Symbol
lamc3
Name
(RefSeq) laminin subunit gamma-3 isoform X1
KO
K06247
laminin, gamma 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04510
Focal adhesion
omy04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110509602 (lamc3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110509602 (lamc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
110509602
NCBI-ProteinID:
XP_021446264
Ensembl:
ENSOMYG00000041810
LinkDB
All DBs
Position
Y:complement(9510367..9760908)
Genome browser
AA seq
1629 aa
AA seq
DB search
MDIPLTTPLLLALLLCSLSFVHGAMDSCYDDDEGVPSRCMPKFENAAFNRTIMASNVCGS
PPEDYCMQTSSTRSCHHCSVSDMGLSHNASLLTDFHTDEEPTWWQSQSMFYRVQHPNSVN
LTLRLGKAFEITYVRLKFYTSRPESFAIYKRTNQDGPWVPYQYYSASCSKTYRKNAKGYI
RPGDDERMALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSAVLQEWVTATDLLISLD
RLNTFGDEFFKDAKVLRSYFYAISDFSVGARCKCNGHGSECVLDEQGALVCDCQHHTAGV
DCQKCHPFYQDRPWARATGDSANQCMKCNCSGRADACVFDAEQYRSTGSGGRCVDCRDHT
DGPHCERCKENHYRRSPQDLCRPCDCNTIGSVSLQCGAEGMCTCRPSVTGEKCDTCQPGF
HSLSPGGCRSCDCETRGSVGICSTLDGGCHCKDNVEGQACDRCKPGSFNLQENNPAGCTS
CFCFGHSLSCRSSNHHAAVNITSDFLEDPDRWSGQFSGGQEYPLLWKEGEVYLLPLSEDD
LGFYRAPEKFLGNHLLSYGQLLSLTFTAEAQCLLPHSVTVLLEGSGITLSADLSPQPGLV
HQPGLAPQHNFTLRLHKEETRLRPSLSAFEFQSLLFNLTAFRISNAGGHNYTSQLSGVTL
ASAAHFSSPVTSSTPPAPWVEVCTCPPGFGGQFCELCAPGYTREVPNRGPLSPCVPCTCH
QHGPCHPETGVCECADFTTGPTCERCLDGYYGNALIGTTNDCQTCPCPDHTSCAQIMEIG
DVVCTNCPSGQRGTRCELCEDGFHGDPLGRSGLVRQCERCDCNGNVDPNALGVCDHMTGR
CFKCLGHTEGDHCQRCRRGYYGDAMDRTMARKCKPCDCSPAGTSGLLEDCDPQTGSCQCL
SHVTGGDCGQCSVGFFNLQPGVGCERCNCNPIGSSSAGCHPITGQCVCQTGLEGRLCSTC
RMGFFGFSSQGCRACNCDPMGSRSMQCHTNGTCPCRQGFVGYKCDQCELNYFHNRATHQC
EECPVCYGLVKEEAGKLKARLQDLEKLLARFDCRNGSGRQHHVREYHVRQHHERGHQGED
SLPNALEDFLAIQEAKEAFVKQFALLETSTHTLSAQLHTVATALNCSASMEEEQEEGWRT
LCRTLADSVSVIRSARTQLTQATLDLDNMVIPFKMTPVPNSWNSAVNESEILMKSHTEMA
GHIESIATKAFMASNQTYSLLMDLLEDNSVEEYISNLTEQMADMQQMKENLTAQVNETLA
IQLSLEEESGEIMVAFVNLTSSILELSKKMPNPSSGTNQSDPSLRSGANQTEGVELSNRT
SELAFHVQSKEELASKIREEIEPRIQTAHNNLAAVQDMHKLTVQAQGSKVIALSSVVTGK
EVESKAITLRRELEDMQREWPQRQAQTKAALKRERLLREKVLEDVSKKVNQTKRVLRPAL
ESATLSNATAQEAKHTANALSKEAKATLTQGKHTRTLSAQLSSSVDITLQQLAEQENHTV
QAQTQANAEPVESLASVKVNIQAAKLQLEAYSLTLTQLVSKIDGGMALERFERILSETAV
RLSVLRGSVESPALNVKIQTLRSAAQDQNSQLTHLEQDLQEIRQERDSLKDIALHLPQTC
PQASGIEGH
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atggatatcccactgaccaccccactcctcctcgccctccttctctgctccctctccttc
gttcacggggccatggactcctgctacgatgacgacgagggtgtccctagccgttgcatg
cccaagttcgagaacgcagcctttaaccgcacgatcatggcttccaatgtgtgcggttca
ccgccagaggattactgcatgcagacgagctcgacgcgctcctgccaccactgtagtgtg
tcggacatgggcctcagccacaacgccagcctgctgacggacttccacacggacgaggaa
cccacctggtggcagagccagtccatgttctacagagtccagcaccctaactctgttaat
ctcaccctgcgcctcggtaaggcctttgagatcacctacgtgcggctcaagttctacacc
agccgaccagagagctttgccatctacaagcggacaaatcaggatggaccatgggtgccc
taccagtactacagcgcctcctgtagcaagacctaccggaagaatgccaagggatatatc
cgcccgggtgacgacgagaggatggcattgtgcacagacgagttcagtgacatctcccct
ttgactgggggcaacgtggccttctctactttggagggacgacccagcgcatataacttt
gaccagagcgccgtgctgcaggagtgggtgacagccaccgacctgctgatctctctggac
aggctcaacactttcggagacgagttcttcaaggacgccaaggtgctgcgatcctacttc
tacgccatctctgatttctctgtgggagccaggtgtaagtgtaatggccatggcagtgag
tgtgtgttggacgagcagggggctctggtgtgtgactgccagcatcacacggccggggtg
gactgccagaagtgtcacccgttctaccaggacaggccatgggccagggccaccggagac
tctgccaaccagtgtatgaagtgtaactgcagtgggcgagcggatgcatgtgtgttcgat
gcggagcagtaccgtagcacagggagtggggggcgctgtgtggactgtagggaccacact
gacggaccgcactgtgaacgctgcaaagagaaccactaccgacggtcaccacaggacctc
tgccgcccctgcgactgtaacaccataggttctgtgagtctgcagtgtggtgcagagggg
atgtgtacgtgcagacccagtgtgacgggggagaagtgtgacacctgtcaacccggcttc
cactcgctcagccctggtggctgcaggtcgtgtgactgtgaaaccaggggcagtgttggc
atctgctctacactggacggcggttgtcactgcaaggacaacgtggagggacaggcgtgt
gacaggtgcaagccaggctccttcaacctgcaggagaacaacccagctggctgcacgtca
tgtttctgcttcggacactcattgtcctgcagatcctccaatcaccatgcagctgtcaac
atcacttctgacttccttgaagacccagaccgctggtctggacagttctctgggggacag
gagtaccctctgctgtggaaggaaggtgaggtctacctgctaccactcagtgaggatgac
ctgggcttctacagagctccagagaagttcctggggaaccacctcctgagctatggccag
ctcctctccctgaccttcacggccgaggcccagtgcctccttcctcacagtgtcactgtg
cttctggaaggatctggaatcaccctgtcagctgacctttcaccccaacctggacttgtc
caccagccaggcctcgctccccagcacaacttcactctcagacttcacaaggaggagaca
agactgaggccttctctgtctgccttcgagttccaaagtcttctcttcaacctcactgca
ttcaggatcagcaacgcaggaggacacaactacacgtcccaactctcaggggtaaccctg
gcctccgctgcccacttctccagccctgttacatcctctaccccccctgctccctgggtt
gaggtatgtacgtgccccccggggtttgggggtcagttctgtgagctctgtgccccaggc
tacaccagagaggtccctaacagaggacccctgtcaccctgtgtgccctgcacctgccac
cagcacggaccctgccaccctgagacaggtgtgtgtgagtgtgcagatttcaccacagga
ccaacctgcgagcgctgcctggatggttactatggtaacgcgttgattggcacgaccaac
gactgtcaaacttgcccctgcccggaccacaccagctgtgctcaaattatggagattggg
gacgtggtctgtaccaactgcccttcaggacagaggggaaccaggtgtgagttgtgtgag
gacggtttccacggcgaccccctgggccgttctgggctggttcggcagtgtgagcggtgc
gactgtaacggtaacgtggaccccaacgcgctgggcgtgtgtgatcacatgacgggccgc
tgcttcaagtgtctgggacacaccgagggagaccactgtcaacgttgtcgacgcggttac
tatggagatgccatggaccggacgatggccaggaagtgcaaaccctgcgactgcagtcct
gcagggacttctgggttgttggaggactgtgacccccagaccggaagttgtcagtgcctt
agtcatgtgaccgggggagactgtggccagtgctcagtcggcttcttcaacctgcagcct
ggagtaggctgtgagaggtgcaactgtaaccccattggctcgtcttccgcggggtgccac
ccaatcacagggcagtgtgtgtgtcagacgggactggaggggcggctgtgcagcacctgt
cgtatgggcttctttggtttctcctcacaaggctgcagagcctgtaactgcgaccctatg
ggttcccgctccatgcagtgccacaccaacggcacctgtccctgccgccagggcttcgtg
gggtacaagtgtgaccagtgtgagctcaactacttccacaacagagccacgcaccagtgt
gaagagtgccccgtctgctacgggctagtcaaggaggaggcagggaagctgaaggcacgg
ctgcaggatttggagaagctcctggcacgcttcgactgccggaatggctccggacgccag
catcacgtgcgcgagtatcacgtgcgccagcatcacgagcgtggccatcagggggaggac
agcctgcccaatgcgctggaggacttcctggctatacaagaggcaaaagaagcctttgtc
aaacagtttgctctcctggagacatctacacacactctctcagctcagctgcacactgtt
gccaccgctttgaactgtagcgccagcatggaggaagagcaggaggaagggtggagaaca
ttgtgcaggacccttgctgactctgtgtccgtgattagaagtgcacggacccagctgacg
caggcaactctggacctggacaacatggtcatccctttcaagatgacacctgtgcccaac
agctggaactcggcggtgaacgaatcagagatacttatgaaaagtcacacagagatggct
ggtcatatagagtctatagcgaccaaagctttcatggcctccaaccagacctactctctc
ctgatggacctactggaggacaactctgttgaggaatacatcagcaacctcacggagcaa
atggcagacatgcagcagatgaaggagaatttgacggcccaggtgaatgagactctagcc
attcagctgtctctggaggaggagtctggtgagatcatggttgcctttgttaacctcaca
tcctccatattggagctgtccaaaaagatgcccaacccctcatcaggaaccaaccaatca
gaccccagcctaagatcgggtgccaaccaaacagagggtgttgagctgagcaacaggaca
tctgagctggcgttccatgtccagtctaaagaagaactggccagtaagatcagagaggag
attgagcctcgaatacagaccgcccacaacaaccttgctgccgtacaggacatgcacaag
ctgacagttcaagcccaggggtcaaaggtcattgccctgtcatcggtggtgacagggaag
gaagtggagtcaaaggccattaccctgcggagagaactggaagacatgcagagagagtgg
cctcaaaggcaggcccagacaaaggctgctctgaagagggagaggctgctgagggagaag
gttctggaagacgtcagtaagaaggtgaaccagaccaagcgagtccttaggcctgccttg
gaaagcgctaccctctccaacgctaccgcacaagaagcaaaacacaccgcaaatgccctg
tctaaagaggccaaggccaccctaacccagggcaagcacacgaggacattgtctgcccag
ctcagctcatctgtagacataaccctgcagcagctggctgagcaggagaaccacactgtt
caggcacaaacccaggcgaacgcagagcctgtagagtctctggccagtgtaaaggtgaac
atccaggcagctaagctgcagcttgaggcctactccctcacactcacccagctcgtcagt
aaaatagatgggggcatggcgctggaacggtttgaacgtatactgagtgagacggcagtg
cggttgagtgttctgcgtggcagcgtggagagcccggccctgaacgtgaagatccagacc
ctgcgatcagccgcccaggaccagaacagccagctgacccacctggaacaggacctgcag
gagatcagacaggagagagacagtctgaaggacattgccctgcacctgccccagacctgc
cctcaggcctcggggatagagggacactag
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integrated database retrieval system
