Oncorhynchus mykiss (rainbow trout): 110509621
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Entry
110509621 CDS
T07259
Name
(RefSeq) low-density lipoprotein receptor-related protein 5 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04150
mTOR signaling pathway
omy04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
110509621
04150 mTOR signaling pathway
110509621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110509621
Membrane trafficking [BR:
omy04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
110509621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
Vgb_lyase
SGL
EGF_LRP2
cEGF
EGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
110509621
NCBI-ProteinID:
XP_036826681
Ensembl:
ENSOMYG00000020005
LinkDB
All DBs
Position
1:complement(22492560..22574938)
Genome browser
AA seq
1629 aa
AA seq
DB search
MELKLRAIAMDVFLVELLFYSSLLSVVNGSPLLLFANRRDVRLVDVEMGRPESAVVVSDL
EDAAAVDFLYSEGLIFWTDVSEEAIKQTYYNQSTNSLKEALGTRQTVVVSGLDSPDGLAC
DWLGRKLYWTDSETNRIEVANLDGTSRKVLFWLDLDQPRAIALNPAHRYMYWTDWGEEPR
IERAGMDGSNRKIIVEVDIYWPNGLTIDLDEQKLYWADAKLSFIHRANLDGSSRETVVEG
TLTHPFALTLSDETLYWTDWQTRSIHACNKHTGDKRREILSGIYSPMDIQVLGSDRQPDI
HTPCSDSNGGCSHLCLLSPMQPFYSCACPTGVKLKEDGKTCRPGAEQVLLLARRTDLRRI
SLDLPDFTDIVLQVNDIRHAIAIDYDPVDGYVYWTDDEVKAIRCSRIDGTEAQTLVTTEI
NHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRRILISENLDEPRAIVLDPVNGYMYW
TDWGEKPKIERANLDGMERLVLLNTSLGWPNGLAIDYEAGKLYWGDAKTDKIEVIDVDGS
NRMTLLEDKLPHIFGFTLLGDYIYWTDWQRRSIERVHKTNAIREIIIDQLPDLMGLKATR
VTEVSGTNGCVEDNGGCSHLCFHRPQGLRCDCPMGLELLSDMRTCVVPEAFLLFTNRADI
RSISLGTNSNDVAIPLTGVKEASALDFDVSENRIYWTDVSTKTISRAFMNGSSVEHVIEF
GLDYPEGMAVDWMGRNVYWADTGTNRIEVARLDGQYRQVLVCKDLDNPRSLALNPANGYM
YWTEWGGKPRIARAHMDGSNIITLVDKVGRANGLTIDYIDQRLYWTDLDTCMIESTNMQG
LQREIVADDLPHPFGLTQYRDYIYWTDWNLRSIERADKRSGLNRTMVQGHLEYVMDILVF
HSSRQDGANDCSQNNGNCAHLCLASPSGSQCRCASHYILDSNSRNCSSPSSFLLFSQKAS
ISRMVLGEQSPDIILPIHVLRNVRAISYDPLDHLIYWVDGRQNIRRARDDGTQSSVVVST
TSTHQQQPDKQPHDLSLDTYSRTVYWTCEATNTINLQRLDGDAVGVVLRDEHDKPRAIVV
NAEKGYMYFTTMQDRSAKIEGASLDGTERESLFTTGLIRPVALALDNKLGKLFWVDADLK
RIESSDLTGANRIVLQDSNILQPMGLTVLGEHLYWIDRQQQMIERVDKLIGEKRTRIQGR
IAYLTSIHAVEDMDPTEFASHPCSHDNGGCSHICIAKGDRTPRCSCPMHLVLLPNLLICG
DPPTCSTEQFTCATGDIDCIPMAWRCDGVAECDDNSDEENCPVCSAIQFQCDKGQCVDAQ
LRCNGEPDCADNSDEQDCDTICLPNQFRCNNKQCILKKQQCDSYNDCADNSDELFCEFLT
PPSSDVQSPSHTSTIGPVIGIILSVFVMGGMYFVCQRVVCRRYKGPNGAFPHDYISGTSH
VPLNFIAPSSSQHGTFTGISCGKSMMSSVSLMGSSCSGAPLYDRNHVTGASSSSSSSTKG
TFYPQGLYLQMLNPPPSPATDRSLYNAEIFYSSNSPSTTRSYRPYLMRGVAPPTTPCSTD
VCDSDYTTSRWKSNKYYMDLNSDSDPYPPPPTPRSQYLSAEESCPPSPSTERSYFHLCPP
PPSPCTDSS
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaagctacgagcaattgcaatggacgtttttctcgtggaattactgttttat
agtagcttgctctctgtagttaatggatcccccttgctgctgtttgccaaccggcgggat
gtgaggctggtggatgtggagatgggaaggccagagtcagcagtggtggtcagtgatctg
gaggatgctgctgctgtggacttcctctactctgaaggactcatcttctggaccgatgtc
agcgaggaggccatcaagcaaacctactacaatcagtccaccaactctctgaaagaggcc
ttggggacaaggcaaacggttgttgtgtcgggtctcgactcccctgacggactagcttgt
gattggctgggccgtaaactatactggaccgactctgagaccaatcgcattgaggtagcc
aacctggatggcacctctcgcaaggtgctattctggttggacctggaccagcccagggcc
atcgccctgaacccagcccaccgctatatgtactggacagactggggggaggagcctcgc
atcgagagggcagggatggacggaagcaacaggaagatcatcgtggaggtggacatctat
tggcccaatggcctcaccattgacctggacgaacagaaactgtactgggcagacgccaag
ctgagcttcatacacagagccaacctggacggctcctcacgggagactgtggtggagggc
accctcacccacccgtttgccctcaccctgtcagacgagactctctactggacagactgg
cagacccgctccatccacgcctgcaacaaacacactggagacaagaggagggagatactc
agtggaatctactcccccatggacatccaagtgctgggttcagatagacagccagatatc
cataccccatgcagcgacagcaatggaggctgctcccacctgtgcctgctgtcgcccatg
caacccttttacagctgtgcatgccccactggagtcaagctcaaggaggatgggaagacc
tgtcgcccaggtgcggagcaggttctactgttggccaggcggactgacctgaggaggatt
tctctggacctcccagacttcactgacatcgttctgcaagtgaacgacatccgccatgcc
atcgccatcgactatgaccctgtggatggatatgtgtactggacagacgacgaggttaaa
gccatccgctgctcccgcattgacggcaccgaggcccagaccctggtcaccacggagatc
aaccacccagatggcattgcggtggattgggtggcccggaacctttactggacggatacg
ggtactgaccgtattgaggttacaaggctgaacggaacctcgcgccgcattctgatctca
gagaacctggatgaaccaagggccattgtgctggaccctgtcaatggttacatgtactgg
acagactggggggagaagcctaaaatagagcgtgctaacctggatggaatggaacgtctc
gtgctgctcaatacctcgctgggttggcccaacggtttagccattgactatgaagcagga
aaactatactggggcgatgccaagacggataaaattgaagtgattgatgtggacggctcc
aataggatgaccctactggaggacaagctaccccacatctttggcttcacgctgctgggc
gactacatctactggacggactggcagaggaggagcatcgagagggtccacaagaccaac
gccatccgagagatcatcattgaccagctgcctgatctcatgggactcaaagccaccaga
gtcactgaggtctccggcacaaacggctgtgtggaggataatggcggctgcagccacctg
tgtttccaccggccccagggcctgcgctgtgactgtcccatgggcctggagctcctcagt
gacatgaggacatgcgtggtgcccgaggctttcctgctcttcaccaaccgggctgacatc
cgctccatctccctcgggaccaactctaacgacgttgccatccccctcaccggggtcaag
gaggcctccgccctcgactttgacgtctccgagaacaggatttactggactgacgtcagc
accaagaccatcagcagggccttcatgaacggcagctctgtggagcatgtgatcgagttt
gggctggactacccagaaggcatggcagtagactggatgggcaggaatgtgtactgggcc
gacacagggaccaaccgcatagaggtggcccggctggatggacaataccgacaggtcctg
gtgtgtaaggacctggacaaccctcgctccctggctcttaaccctgccaatggctacatg
tattggacagagtggggaggcaagcccaggatcgccagggcccacatggacggcagcaac
ataattaccctagtggacaaagtgggcagagccaacggcctcaccatcgactacatcgac
cagagactctattggaccgacctggacacctgtatgatagagtcaaccaacatgcaaggt
ctgcagagggagatagtggctgacgacctccctcatccgttcggtctgacccagtaccgg
gactacatctactggacagactggaacctgcgcagcatcgagcgggccgacaagcgctct
gggctgaaccgcaccatggtccagggacacctggagtacgtcatggacatcctggtcttc
cactcctctcgccaggatggtgccaatgactgctcccagaacaacggcaactgtgcccac
ctgtgcctggcgtcgccctccggctcccagtgccgctgtgcctcccactacatcctggac
tcaaacagcaggaactgcagctccccctcgagcttcctcctgttcagccagaaggcctca
atcagccgcatggttctgggtgagcagagccccgacatcatccttcccatccacgtcctc
cgcaacgtccgggccatcagctacgaccccctagaccacctgatctactgggtggacggg
cggcagaacatcaggagggcccgcgacgatggcacacagtcgtcagtggtggtgtccacc
acttccacccaccagcagcagcctgacaaacagccccacgacctgagcctggacacctac
agccgtactgtctactggacttgtgaggccaccaataccatcaacctccagcgcctggac
ggagatgccgtgggcgtggtgctgcgagatgaacatgacaaacccagagccattgtagtc
aacgccgaaaaagggtatatgtatttcacgaccatgcaagatcgctctgctaagatcgag
ggagcgtctctggatgggacagagcgggagtctttgttcaccacgggtctgatccggcct
gtagccctggccctggacaacaagctggggaaactcttctgggtggatgctgacttgaaa
cgcattgagagcagtgacctcactggagccaatcggatcgtcctccaggactctaacatc
ctgcagcccatgggtctgacagtgctgggggagcacctgtactggatcgacagacagcag
cagatgatcgagagggtggacaagctgattggggagaagaggacccgtatccagggccgc
attgcctacctcaccagcattcacgctgtggaagacatggaccctacagagtttgcttct
catccctgttcccatgacaacggaggctgctcacacatctgcattgccaaaggagaccgg
acacctcgctgctcttgtcctatgcacctggtcctgctgcccaacctgctcatctgtgga
gacccacccacctgttccacagagcagttcacctgtgccacgggtgacattgactgcatc
cccatggcatggcgctgtgacggcgttgctgagtgtgatgacaacagtgacgaggagaac
tgccccgtgtgctcggcaatccaattccagtgtgacaagggccagtgtgtggatgctcag
ctacgctgcaacggagagccagactgcgcagacaactccgatgaacaggactgtgacacc
atatgcctgcccaaccagttccgctgcaacaacaagcagtgcatcctgaagaaacagcag
tgtgactcctacaatgactgtgctgacaactctgacgagctcttctgtgaattcctcacc
cccccgtcaagcgacgttcaatcaccatctcacaccagcaccatcggcccagtcattggc
atcatcctgtcagtgtttgtgatgggagggatgtactttgtgtgccagcgggtggtgtgc
cgccgttacaaaggtcccaacggagccttcccccacgattacatcagtggcacctcacac
gtacccctcaacttcatcgcacccagcagctcacagcacggaaccttcacaggtatctcg
tgtgggaagtctatgatgagttctgtcagtctgatggggagcagctgtagtggggcacca
ctctatgacaggaaccatgtgacaggggcctcctccagcagctcctccagcactaaggga
accttttatccacagggtttgtatttgcagatgctcaacccgcctccctctccagccacg
gatcgctccctgtataatgcagagatcttctactcctctaacagtccctccaccaccagg
tcttacaggccttatctaatgcgcggtgtggcaccccccaccaccccatgcagcactgat
gtctgtgacagcgactacaccacaagtcgttggaagagcaacaagtactacatggaccta
aactcagactctgacccttaccctcctccccctactccccggagccagtacctatcagca
gaggagagctgccccccttctccatccacagagcgcagttactttcacctctgtccccca
cccccgtcaccatgcactgactcttcatga
DBGET
integrated database retrieval system
