Oncorhynchus mykiss (rainbow trout): 110509642
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Entry
110509642 CDS
T07259
Symbol
wdr45
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 4 isoform X1
KO
K22991
WD repeat-containing protein 45
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110509642 (wdr45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110509642 (wdr45)
Membrane trafficking [BR:
omy04131
]
Autophagy
Other autophagy associated proteins
Others
110509642 (wdr45)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_RSE1_2nd
Beta-prop_Vps41
BCAS3_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
110509642
NCBI-ProteinID:
XP_036823917
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Position
Y:12113136..12116480
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AA seq
386 aa
AA seq
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MAQPRGVNSLQFNQDQSCFCCAMETGVRIYNVEPLIEKGHLGEWNSDLWYERSVCSHTVC
VIILCLCVSDHEQVGSVAQCSMLHRSNLLAVVGGGVNPKFSEISVLIWDDAREGRDPKDK
LVLEFTFTKPVLAVRMRHDKIIIVLKNRIYVYSFPDNPVKLFEFDTRDNPKGLCDLCPSL
EKQLLVFPGHKCGSLQLVDLSNTKPGTSSAPFTINAHQSEIACLALNQPGSVAASASRKG
TLIRLFDTTTRDKLVELRRGTDPATLYCINFSHDSSFLCASSDKGTVHIFALKDTKLNRR
SALARVGKVGPVIGQYVDSQWSLASFTVPAECACICAFGKNTSKNVNSVIAICVDGTFHK
YVFTPDGNCNREAFDVYLDICDDDDF
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaccgagaggagtcaacagtctacagttcaaccaggaccagagttgtttctgt
tgtgccatggaaaccggtgtcaggatctacaatgtggagcctcttatagagaaggggcac
cttggtgagtggaattcagacctgtggtacgagcgatctgtgtgttcgcatactgtgtgt
gtgatcatcctgtgcttgtgtgtgtcagaccatgagcaggtgggtagtgtggcccagtgt
tcaatgctgcatcgctccaacctgctggctgtagtaggaggtggagtcaaccccaagttc
tctgagatctcagtgttgatctgggatgatgctcgggaggggagggaccccaaggacaag
ctagtgctggagtttacctttaccaagcctgttctggccgtacgcatgagacacgacaag
atcatcattgtgttaaagaacaggatctatgtctacagtttccctgacaaccctgtgaaa
ctgtttgagtttgacaccagagacaaccctaaaggactgtgtgacctgtgccccagtctg
gagaaacagctgctggtcttccctggacataagtgtggaagtctacagcttgtggacctt
tccaacaccaagcctggcacatcgtctgccccctttaccatcaacgcccaccagagtgag
atcgcctgcctggcgctcaaccagcctggcagcgtcgcggcctcggcctcccgcaagggt
accctcatcagactgtttgatactaccaccagagacaaactagtggagctgcgcagagga
acagaccctgctacactctactgcatcaacttcagtcatgactcttcgttcctgtgtgcc
tccagtgacaagggcactgttcacatctttgctctcaaagatactaaactcaacagacgc
tcagcattggctcgtgtggggaaggtgggcccagtgattggtcagtatgtggacagccag
tggtcattggccagtttcaccgttccggcagagtgtgcctgtatctgtgcgtttgggaag
aacacctctaaaaatgtcaactctgtcatcgctatctgtgttgacgggacgttccataaa
tacgtgttcacccctgatggtaactgtaaccgagaagcctttgacgtttacctggacatc
tgtgatgatgacgacttctaa
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