Oncorhynchus mykiss (rainbow trout): 110509659
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Entry
110509659 CDS
T07259
Name
(RefSeq) nucleolysin TIA-1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110509659
03041 Spliceosome [BR:
omy03041
]
110509659
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
110509659
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110509659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
Motif
Other DBs
NCBI-GeneID:
110509659
NCBI-ProteinID:
XP_036823311
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Position
Y:complement(12982130..13001842)
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AA seq
390 aa
AA seq
DB search
MMDDEQPKTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDTAGNDPYCFVEFYEHRHA
AASLAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIKAAFAPFG
RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK
ATYETNTKHLSFEEVVNQSSPSNCTVYCGGVTAGLTEQLMRQTFTPFGQIMEIRVFPDKG
YSFVRFNSHEGAAHAIVSVNGTSIEGHVVKCYWGKETTDMVSPMQQVQVPQLTPQQNKIG
FAAQPYGQYAQWYGNAQQIGQYVPNGWQVPTYGVYGQAWNQQGFNHLQAGAGWTGVGAVS
NGGVVEPGQGVNGAVLANQSVMGTAGYHTH
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgacgaacaacccaaaaccctgtatgtggggaacctgtcccgggatgtgacc
gaagccctcatcatgcagctgttcggccagattggaccctgcaagagctgtaaaatgata
gtagatacggcaggtaatgacccctactgctttgtggagttctacgaacacaggcacgct
gccgcgtcactcgcagccatgaacggtcgtaaaataatgggtaaggaggtcaaagtgaac
tgggccacaacccctagcagccagaagaaagacacaagcaatcacttccacgttttcgtc
ggagacctcagtcctgaaatcaccacggatgacatcaaagctgcctttgccccctttggg
aggatatctgatgcccgggtggtgaaagacatggctactggcaaatctaaaggctatggc
tttgtgtccttcttcaacaaatgggatgcagagaatgccatccaacagatgggaggtcag
tggttgggaggacggcagatcaggaccaactgggccacccggaagccccctgcgcccaaa
gccacctacgagacgaacacaaagcacctgtcgtttgaggaggttgtgaaccagtccagc
cccagcaactgtaccgtctactgtggaggagtcactgcagggcttacagaacaactgatg
aggcagaccttcacccccttcggtcagatcatggagatcagagttttcccagacaaaggc
tactcgtttgtgaggttcaactcccacgagggagcggcccacgccatagtgtcagtgaac
gggacgtccatagagggtcacgtggtgaagtgttactgggggaaggagaccacagacatg
gtcagccccatgcagcaggtacaggtgcctcagctcacaccgcagcagaacaaaattggc
tttgcagcgcagccctacggccagtatgcccagtggtacggtaacgcccagcagattggc
caatacgtgcccaacgggtggcaggtgccgacctacggagtctacggacaggcctggaac
cagcagggcttcaatcatttacaggcgggtgcagggtggacgggcgttggagcggtcagt
aatggcggcgtggtggagcctggacagggagtcaacggtgcggtgctggccaaccagtcg
gtcatgggcaccgctggctaccacacccactga
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