Oncorhynchus mykiss (rainbow trout): 110509768
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Entry
110509768 CDS
T07259
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110509768
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110509768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
110509768
NCBI-ProteinID:
XP_036797430
Ensembl:
ENSOMYG00000000215
LinkDB
All DBs
Position
2:20990131..21058856
Genome browser
AA seq
2705 aa
AA seq
DB search
MKPLKRQRGCSPPSTRAKGGKKRGATETPPERDNRNKLRKENQDGQPQSTTPAHLLRKQS
RTSSDSSQREPIRGSETPKKEGPREQVLPRQPEDKEKTEDSRGGVGGKPGGPNSTPTSSH
NNILTIPTPTTSPSPTSMSSRKTATFKARVPKKKYIAEHYAGSNAPSLTFTPAPMHNSHI
NYSSTSSSINIINSSSTNSNNSSNTISNSSRPNTTINGINSGTNSISNSISNSISNSISN
SHSSSSVSHSLAPSVSNEERRVASSHSHGPGEQGMTGASIGPNDGSVAPQDRERDPQGGE
TEGAPNSVRSVSTDTASEHDLEVNSQPSTSPARAPYQGSLSGADALAKGLKNQRVLARCR
WRDRLNGEQGGRERERDGPLSPMFRAGVVRRVSGGSADIQLQGEEGILCYPFQGGTAHPE
WEETSVEFILDAPPPGTASVAIGTRVCVPFGGGGGRDGGEQGTPQLYREGVLSQVDPHPA
VSFPYRVLLCEDLEVLENGLREEEGGMEEKRRRAQAQAVWVSRQSLRLLTPPWELPHPER
EREREREREERERREEMEVEREVCQLSIGMALGGPMGGGVRLVHSFSPDGVVGGHHYGNT
PPHPSSLVTTSVVTITGEGYPDREIEQEREQERQKQPQTPEEDMEMSRFTMGTQHRHILS
KPLLGGHSYPSSQHLVQGLSTPLGSHVSSLTLPGPEALGMTPPPHLPPSKSALVPLDKTP
SQIPTPTPGGGSTSSSASSSRSRTPLSAALQKYKKGDVVCTPNGIRKKFNGKQWRRLCSR
EGCMKESQRRGYCSRHLSMRTKEMEGGGERDRGRGGGGSSSGTITPSDLRGFDWDETSRD
SSEASSRGDSRPRLVLPSLLPHDFSRFDFDECEAATMLVSLGSSHSGTPSFSPISNQSPF
SPAPSPSPSPLFGFRPANFSPITASSVLPPPRRHRHPSATGGKLGTPGGAERERHTSGVQ
PSFHTNLTFTVPMSPSKRKIDVPPPPPPSSHPHHDHPPKPELEQGDLNSASFPVLSPQTP
AHTHAYTPTFSSPQGVSTPTSRPPSSPATSPPPLLVSPTPPSPPDSGPRRFHPTSQQALR
DSPVIVRNPEVPLAKFTEHPLGRGGGGVGDPKSLNSITPQSVSTLQVPVPINAAAAAATN
GTVLLQSPTPTLVLVSSAPPSLTSVTPGYPALACISISTTPPSSGPPLTNPASPGEGRGR
TERTGLFGGEVQQPVACHPSPTALLPLILPAENLHPTPCKDIIMGRPGTVWTNVEPRSVP
VFPWHSLVPFLAPTQSDASTQSGEGQQPINHPQAASLKTESQGGAVLLQEANEDPPTLER
GPTRPTPSTDDLTPEREREAERERPDSETESDVDDPFFPSVLPEPPLSVTPVKRRTQSLS
ALPKDGDKISPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYAL
GPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSDGRGLPGPGGKDIRERSMSETT
EPHGVELKGVGPGLLGVSERNPGEGHVGQLPRPRAFSQSAVHSLERSERGNTQALAELSQ
MCGDGGGQFSGRAQTLSRSQRGVSEDMTSDEERMVICEEEGDDDVIEDPYPASSIDLKCK
ERVTDSDSDNASGNESDRKRVFAPVICSSSSQPTPHGRSVSLSSYPSKRYDEERGGGLSD
RRRKRGIEGGAGDGGGVASLSLSLSSSGHSVISSPGGPVPSALAPLGLSPLLGLGAVRVA
STVVTNVVRPVVSTPVPIASKPRDGAASSIPHPPDRRSLPLQQAQLLIDSGAGSGGPGYY
SSSSPNPIGAGAGPGGLVTSLVFPGHSQSTVQLISPSPNPSSHHQLPPTAPVSAPTHNHT
NGPLPLSLLQPQFLSSSSLASPGGKAITQVQYILPTLSASSNHKSPSPQLHNLPNSIFNL
PTAPPTHMSIANGKQVGLGSLMGYASSPAVGVVSPGARVQSQSPVLQGKMLLPMATVRTS
PAQQYPLVAPPLPVQNGAQAGSKIFQIAPMPVVQSQLQQGGAGHPGSPFPITMGTATVLH
QGSSPSQTVLLPPPPTRITYVQSMPGVPSALPLVSTTTGSSSPQQAQPTPGSAYVSSPLA
TLGFTAIAPPGQNLVQPLITGQPPLQAPVQSPTCPSLPSGPASASGGQIITAIYPPTSVT
MATGVVSMATGPPSMVYTVSSSSSLSTHILPKYTFAPTTPTTHTHTHTQLQSDRQTDRHV
GERPTDRTSHSQSEKAADRLAETQPELQAYGKTDRPTLTQADRQTEREAQTFNKSSSLVA
PPSGSSLSLRPCSPPLPSHTSTGSAPGTPKHPQLPVRTPQKIKATVANIPVGSYEGGGRG
KEREKNREREREKERENTGANSRFSFELERPVESTSPSQHTHTAEEPPSDRPPEGHDPGD
NTDTCSTEASNKESGWKDSVPSSPLPPPLGTDPALPPPQSDKDAPPPKKVKARPPPLKRT
FDSVDKVLSEVYFEERFAQLPEFRPEEVLPSPTLQSLATSPRAILGSYRRKRKNSTDLDS
STEDPVSPKRRSRRRSSCSSEPSTPKSAAKCEGDVFTFDRPAPPSVCPPPGTGADGEDIL
GELEFDKVPYSSLRRTLDQRRALVMQLFQEHGFFPSAQATAAFQARYSDIFPTKVCLQLK
IREVRQKIMQTAVPSETNEASSLPGPSGAQSGEGTGGGAEPLGEEADREREGSPEEPRDS
QESSR
NT seq
8118 nt
NT seq
+upstream
nt +downstream
nt
atgaagccactaaagagacagaggggatgctctcccccctccacgcgggccaaagggggg
aagaagagaggggcgacagagacccccccagagagggacaacaggaacaaactcaggaag
gagaaccaagacggacagcctcaatccacgacccccgcccacttgctacggaaacaatcc
agaacctcctctgacagctctcagcgggagccaatcagaggcagtgaaaccccaaagaag
gagggacctagagagcaggtgctgccaaggcaacctgaagataaagagaagaccgaggac
agcagagggggggttggggggaaaccaggggggcctaacagcacccccacctcctcccat
aacaacatcctcaccatccccacccccactaccagtcccagccctacctccatgtccagt
aggaaaacagccaccttcaaggccagagtccccaagaagaagtacattgctgaacactat
gctggtagcaacgcgcccagcctcaccttcacccctgcccccatgcacaacagccacatt
aactacagtagtactagcagtagtattaacatcatcaacagcagtagtactaacagtaat
aacagtagtaataccattagtaacagtagtaggcccaacactactattaatggtattaac
agtggtactaatagcattagtaacagcattagtaacagcataagtaacagcattagtaac
agccatagtagcagctcagtcagccactcgttagcccccagtgtgtccaatgaggagagg
agggtagctagcagccacagccatggcccgggggaacagggaatgacaggggcctccata
gggcccaacgatggtagtgtggccccccaggacagagaaagagacccccagggtggagag
acagagggggcccctaactcagtacgctccgtatccacggatacagccagcgagcacgat
ctggaggtgaactcccagcccagtaccagccctgctagagccccctaccagggcagtctg
tccggggcggatgccctggccaaaggcctgaagaaccagagagttctagcccgctgtcga
tggagagacagacttaacggagagcaaggtgggagggagagagagagggatggacccctg
tctcctatgttcagggctggggtggtgcggcgggtgagtgggggcagcgctgatatccag
ctgcagggggaggaggggatactctgttacccctttcagggggggaccgcacacccggag
tgggaggagacgagcgtggagttcatcctggacgcccctccacccggcacggcgtccgtg
gccatcgggacacgcgtatgtgtgcctttcggagggggaggggggcgagatgggggtgaa
caggggacacctcagctatacagagaaggggtgctgtcccaggtagacccacaccctgcc
gtgtcgttcccctacagggtgctactgtgtgaggatctagaggtgctggagaatggattg
agggaggaggagggagggatggaggagaagaggaggagggcgcaggcccaggctgtatgg
gtgtccagacagagcctgaggctgctgactcccccctgggaactgcctcacccagagagg
gagagagagagagagagagagagggaggagagggagaggagggaggagatggaggtggag
agggaggtgtgccagctgagtattggtatggcgctgggtgggccgatgggagggggggtg
aggttggtgcatagcttctctccagatggggtggtgggggggcatcactatggaaacact
cccccccatccctcctcgttggtaacgaccagcgttgtcaccatcactggagagggttac
cctgacagagagatagaacaagagagggaacaagagagacagaaacagccccaaacacca
gaggaggacatggagatgtctaggttcactatgggcacccagcatcgccacatcctctcc
aagcccctcctcggggggcacagctacccctcctcccaacacctggtccagggcctgagc
acgccactgggctctcacgtgtcctccctcaccttgcctggccctgaggccctgggcatg
acccccccaccacacctacccccttccaagagcgccctggtccccctggacaagaccccc
tcccagatccccacccctacccctggaggggggtctacctcctcctcagcctcctcctcg
cgctcccgcacccccctgtcggccgccctgcagaagtacaagaagggggacgtggtgtgc
acccctaacggtatccgcaagaagttcaacggcaagcagtggagacgcctctgttccaga
gagggctgtatgaaggagtcccagagacgaggctactgctcacggcacctctccatgaga
actaaagagatggagggagggggagagagggacagggggagaggaggaggggggagcagt
tcggggactatcaccccctcagacctgcgtgggtttgactgggatgagacgtccagagac
agcagcgaggccagcagtagaggagactcccgccctcggctggtgctgccctcccttcta
ccccatgacttctccaggtttgactttgacgagtgtgaggcagccaccatgcttgtgtct
ctgggcagctctcactctgggaccccctccttctcccccatctccaaccagtcccctttc
tcccccgccccctcgccctcaccctcccccctcttcggattccgtcccgccaacttctcc
cccatcaccgcctcctccgtcctcccccctcctcgtagacacagacaccccagtgccacg
gggggcaagctgggcacccctgggggggcagagagggagaggcatacttcaggggtccag
ccgtccttccacactaacctgaccttcactgtccccatgagccctagcaaacgcaaaata
gacgttcctcctccccctcctccctcctcccacccccaccacgaccacccccccaaacct
gagctggagcagggggacctgaactctgcctcgttccctgtcctctccccccagacccca
gcacacacccacgcttacacacccaccttctcctctccccaaggggtgagcacaccaacc
agccggcccccctcctcccccgccacctccccccctcccctcctggtgtccccaactccc
ccctcccctccagactcaggcccccgccgtttccaccccacatcccagcaggccttgcgg
gactctccagtgatagtgcggaacccggaggttcctctggccaagttcacagagcatccg
ttaggccgtgggggggggggagtaggtgatcctaagagtcttaacagcattactccccag
tctgtctccactctccaagtccctgtacccatcaacgctgctgctgccgcggcaaccaac
ggcaccgtcctcctccagagccccacccccactttggtgctggtgtcatccgccccaccc
tccctgacctccgtcacccccggttaccccgctttggcttgcatctccatctctaccacg
cccccctcttcgggaccccccctcaccaacccagccagcccaggggaagggcggggtagg
acggagaggacaggcttgtttgggggggaggttcagcagccagtggcctgtcacccctct
cctacagccctgctgcccctcatactgcctgcagagaacctgcaccccacaccatgcaaa
gacatcatcatgggacgccccgggacagtctggaccaacgtggaaccccggtcagttcct
gtgtttccctggcattcattggtccctttcctggcaccaacccaatcagatgcctctact
cagtctggtgagggccaacaaccaatcaatcatccccaagctgccagtctgaaaacagag
tctcaggggggtgcagtgctgctacaggaggccaatgaggacccccccaccctggagaga
ggacccacaaggccaactccctccacagatgacctgaccccagagagggagagagaggcc
gaaagagagaggccagacagtgagactgagagtgatgtggatgacccgttcttccccagt
gttcttcctgagccgcccttgtctgtgactcctgtgaagagacgcactcagtccctcagc
gccctgcccaaagatggggacaaaatcagccctaacaagagggagaaggaccacatcagg
cggccgatgaatgcgttcatgatcttcagtaagcgtcatcgagcgctggtgcaccagaga
caccccaaccaggacaaccgcacggttagcaagatcctgggcgagtggtggtatgccctg
gggcccaaagagaagcagaaatatcacgacctcgccttccaggtgaaggaggcccacttt
aaggcccacccagactggaagtggtgcaacaaagacaggaagaagtctagttctgatggc
cgagggctcccggggccggggggcaaagacattagagaaaggagcatgtctgagactacc
gagccccatggtgtggagctcaaaggggtggggcctggcctgctgggtgtgtctgagcgg
aatccaggggaggggcatgtaggtcagctaccccgcccccgagccttctcccagagtgcc
gtgcacagcctggagaggagtgagaggggcaacacacaggccctggccgaactgtcacag
atgtgtggggatggtggtggccagttttcggggcgtgcccagaccctgtcccggtctcag
aggggggtcagtgaggacatgaccagtgatgaggaacgcatggtcatctgtgaagaggag
ggagacgacgacgtcattgaggacccgtaccctgccagctccatagacctgaagtgtaag
gagagagtgacggacagcgacagtgacaacgcctctgggaacgagagcgatcgcaagcgt
gtctttgctccagtgatctgctcttcctcctcgcagcccaccccccacggacgctccgtc
tctctctcctcctacccttccaaacgctacgacgaggagagaggaggggggctctcagac
cgcaggagaaagagaggaatagagggaggagctggtgatggaggaggagtggcatccctc
tctctttccctgtcctcctcaggccactctgtcatctccagccccggaggcccagttcct
tctgcccttgccccccttggcctgtctcctctcctcgggttgggggctgtcagagtggcc
tctacagtggtgaccaacgtggttcgtccggtcgtgagcacgccagtccccatcgctagt
aaaccccgagacggagcagcttcatccattcctcacccaccagacaggaggtctctccca
ttgcaacaggcgcagcttctgattgactccggagcaggaagcggagggcctggttactac
tcctcatcgtcacccaatcccataggtgcaggggcaggtccaggggggctagtgaccagc
ttggtgttcccggggcacagccagtccaccgtccagctcatcagtccctcccccaatccg
tcctcccaccaccagctgccccccaccgcccctgtctctgcccccacacacaaccacacc
aacggccccctgcccctctccctgctccagccccagttcctctcctcgtcatctctggca
tcccccgggggcaaagccatcacacaggtccaatacatcctgcccaccctatcagccagc
tccaatcacaagagcccctcccctcagctgcacaacctgccgaacagtatcttcaacctg
cccacagctccgcccacccacatgtccatagccaatgggaagcaggtggggctaggctcg
ctgatgggatacgcctccagcccagccgtgggagtggtcagcccgggagccagagtgcaa
tcccagtccccagtcctacagggcaagatgctgcttcccatggcaacagtgaggacgtcc
cctgctcagcagtaccccctcgtggctccacctcttcctgtccagaatggagctcaagca
ggaagcaagatcttccagatcgctcccatgcctgttgtccaatcccagctccagcaaggc
ggggcagggcatcctgggagcccttttcccattaccatgggaacggctacagtgttgcac
caaggttcttccccatctcagactgtgctgctgccgcccccaccaaccaggatcacctat
gtccagtccatgccaggagtcccctctgctctgcctctggtctccacaacaacaggctcc
tcctcccctcagcaggcccagcccacccctggatcagcatatgtttcgtcgcccctagca
acgctgggctttacagccatagccccccctggacagaacctagtccaacccctcatcaca
ggtcagcctccccttcaggccccagtccagtcccctacctgcccctccctcccctctggc
ccagcctctgcttcagggggacagataatcaccgccatctacccccctaccagcgtcacc
atggcaactggggtggtctccatggctaccgggccacccagcatggtgtacacagtctcc
agctcctccagtctgtccacccacatcctgcccaaatacacattcgcccccaccaccccc
accacacacactcacacacacacccagctccagtcagacagacaaacagacaggcatgtg
ggggagagacccacggacagaacgtctcactctcagtcagagaaagcggcagacagacta
gcggagacgcagcctgagctacaggcgtacggaaagacggacaggccaaccctcacgcag
gcggacagacagacggagagggaagcccagaccttcaataaaagcagcagcttagtggcg
cccccaagtggctcctcattgtcactgcggccctgcagcccccccctgccctctcacact
tccacaggcagtgcaccaggcacccccaaacatccccagctcccggtgagaacccctcag
aaaatcaaagccacagttgctaacatcccggtgggcagctacgagggaggaggccgagga
aaggagagggagaagaaccgagagagggaaagggagaaagaaagagagaacactggggcc
aacagtcgtttttcctttgagctggagcgtcctgtggagtcgacgtccccctcccaacac
acacacactgctgaggagcccccctctgacagaccccctgagggacacgaccctggggac
aacactgacacatgcagcacagaggccagcaacaaggagtccgggtggaaggactctgtc
ccctcctcacccctgccccctcccttgggtacagaccctgccctgccacctccccagagc
gacaaagacgcccctcctcccaagaaggtgaaggcccgccccccgccactcaaaaggacc
tttgactctgtggacaaggtgttgtcggaggtgtattttgaggagcgttttgctcagcta
ccagagttcaggccagaggaggtcctgccctcccccaccctgcagagcctggccacctcc
ccccgcgccattctgggcagctaccgccgcaagaggaagaactccacagacctggactcg
tccacagaggaccctgtgtctccgaagaggaggagcagaaggcgctccagctgcagctcg
gagcccagcacacccaagagtgccgccaagtgtgagggagacgtcttcaccttcgaccga
ccagcccccccgtctgtgtgtccccctccagggacaggtgctgatggagaggacatcctg
ggggagctggagtttgacaaggtgccctactcctctctgagacgcaccctggaccagaga
cgagccctcgtcatgcagctcttccaggagcatggcttcttcccctcagcccaggccacg
gcagccttccaggcacgctactcagacatcttccccaccaaggtgtgtctgcagctgaag
atcagggaggtccgacagaagatcatgcagactgccgtcccctctgagaccaacgaggcc
tcctcgctccccggaccgtctggcgcccaatcaggggaagggacaggaggaggggcggag
ccattgggagaggaggcggatcgagagagggagggtagtccagaagagccgagggattcg
caggagtcttctagatga
DBGET
integrated database retrieval system
