Oncorhynchus mykiss (rainbow trout): 110509883
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Entry
110509883 CDS
T07259
Name
(RefSeq) hemicentin-1 isoform X1
KO
K06499
carcinoembryonic antigen-related cell adhesion molecule
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
110509883
04147 Exosome [BR:
omy04147
]
110509883
04090 CD molecules [BR:
omy04090
]
110509883
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
omy00537
]
110509883
Cilium and associated proteins [BR:
omy03037
]
Other cilia and associated proteins
Stereociliary proteins
110509883
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
110509883
Exosomal proteins of bladder cancer cells
110509883
CD molecules [BR:
omy04090
]
Proteins
110509883
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
omy00537
]
Antigens
110509883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
V-set
C2-set_2
Ig_6
Ig_4
DUF6733
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
110509883
NCBI-ProteinID:
XP_036825314
LinkDB
All DBs
Position
3:12808928..12825486
Genome browser
AA seq
2268 aa
AA seq
DB search
MDHPLVWVLILVLLNFNTDVSGQVVVPSMNPLAVGSNVTLNLVPQSSINIGTWSYETTTI
VLFYPGGSSVSTSYQGRVSFNRSSAELSISSLQLNDSGLYTVQGMEPVLTAVVTLSVQEP
ISNVTLRANATDLVELNDTAIFTCSVSSGTSLSYRWMNGSSEVAASDRVQLGVGNSTLSI
VSVTRYDEGPFRCEVINGISNGTSQPIGLNVRYGPSKLTMMVVPEMIIGHTAYMMGSVIT
LSCSAQSKPAVSYKWRFNGVFLNEQSPQLSLQNTRENQTGSYACLAHNNVTLRYATMTTM
IKIVEPISAVSLNRDGKPPILDQSFTLRCEVTGPVDYIHWLINGQVISLNNRTFFSTDNK
TMVINPIQFSDSGEYLCEAFNAVSNKTSMTYTLVVNYGPEKPDVTSPDIAMTGHIVTFNC
SASSQPPSQFSWFFNGSQVETGSVYETDPLTLASHGEYTCVSFNNVTGRNSTVSKMLIVI
EPVSMAMVKVMGAQPIADNMFSLTCETTGTIYSIHWMKNGWPLYADNRTDFSMNNNTLTF
NSVQDSDNGGYQCSAYNPLSNMTSTEYRLIVNYGPERPVIMSPDIAMTGYIVTFNCSASS
QPPSQFSWFFNGSQVETGSVYETDPLTLASHGEYTCVAFNNITDRNSTASKMLTIIAPVT
MTTVKVIGAQPILNERFSLTCETAGTVYSIQWMRNGWPLYADNRTDFSMNNNTLTFNYVQ
DSDIGDYQCSASNPLSNMTSSNYRLIVNYGPEMPVITGPALGETGHNVTFNCSASSQPPS
QFSWFFNGSQVVTGSVYETDPLTLASHGEYTCVAFNNVTGRNSTVSKMLIVIEPVSMAMV
KVMGAQPIADNMFTLTCETTGTIYSIHWMKNGWPLYADNRTDFSMNNNTLTFNSVQDSDN
GGYQCSAYNPLSNMTSTEYRLIVNYGPERPVIMSPDIVMTGYIVTFNCSASSQPPSQFSW
FFNGSQVETGSVYETGPLTLASHGEYTCVAFNNVTGRNSTVSKMLIVIEPVSMAMVKVMG
AQPIADNMFSLTCETTGTIYSIHWMKNGWPLYADNRTDFSMNNNTLTFNSVQDSDNGGYQ
CSAYNPLSNMTSTEYRLIVNYGPERPVIMSPDIAMTGYIVTFNCSASSQPPSQFSWFFNG
SQVETGSVYETDPLTLASHGEYTCVAFNNITDRNSTASKMLTIIAPVTMTTVKVIGAQPI
LNERFSLTCETAGTVYSIQWMRNGWPLYADNRTDFSMNNNTLTFNYVQDSDIGDYQCSAS
NPLSNMTSSNYRLIVNYGPEMPVITGPALGETGHNVTFNCSASSQPPSQFSWFFNGSQVV
TGSVYETDPLTLASHGEYTCVAFNNVTGRNSTVSKMLIVIEPVSMAMVKVMGAQPIADNM
FTLTCETTGTIYSIHWMKNGWPLYADNRTDFSMNNNTLTFNSVQDSDNGGYQCSAYNPLS
NMTSTEYRLIVNYGPERPVIMSPDIVMTGYIVTFNCSASSQPPSQFSWFFNGSQVETGSV
YETGPLTLASHGEYTCVAFNNVTGRNSTVSKMLIVIEPVSMAMVKVMGAQPIADNMFTLT
CETTGTIYSIHWMKNGWPLYADNRTDFSMNNNTLTFNSVQDSDNGGYQCSAYNPLSNMTS
TEYRLIVNYGPERPVIMSPDIVMTGYIVTFNCSASSQPPSQFSWFFNGSQVETGSVYETD
PLTLASHGEYTCVAFNNITDRNSTASKMLTIIAPVTMTTVKVIGAQPILNERFSLTCETA
GTVYSIQWMRNGWPLYADNRTDFSMNNTLTFNYVQDSDIGDYQCSASNPLSNMTSSNYRL
IVNYGPEAPVITGPALGETGHNLTFNCSASSQPPSQFSWFFNGSQVVTGSVYETGPLTLA
SHGEYTCVAFNNVTGRNRTVSKILTVVEPVTMTMVKVMGSQPILNQTFSLTCETTGTIYS
IQWMRNGWPLYADNRIDFSIDNNTLTFNSVQHSDKGDYQCSAYNPFSNMTSTDYRLIVNY
GPERPVIMSPDIAMTGYIVTFNCSASSQPPSQFSWFFNGSQVETGSVYETDPLTLASHGE
YTCVAFNNLTVRNSTVSKMLTIIEAITSVTVKRNKLPIASDNLTLTCVVTGHYDTIYWMK
DNLSLVLNNTLNSDITISNNSLHFSPVKVSNDGNYQCVATNLFGPNTSPKYQLLVNYGPK
SVNISGPVSVVIGSVTTVTLKCSADSRPISEYGWKFNNQSVFGTGPMIAVIASLENAGDY
TCVAKNPVTNISTSKTISLDVTGHSNAPPFQARVGLMLTALLALSLCL
NT seq
6807 nt
NT seq
+upstream
nt +downstream
nt
atggaccatcctctggtgtgggttctcatcctggtgctgctcaacttcaatacagatgtc
tctggccaggtggtggttccctcgatgaaccccttagctgtgggcagtaatgtcaccctg
aacctagttcctcaaagctccatcaacatagggacctggtcatatgaaactacaaccatt
gtacttttctatcctggtggcagtagtgtgagtacaagttatcaaggcagagtctcattc
aaccgctcctccgcagagctgtccataagctctctccaactcaacgactcaggtctgtat
accgtgcagggaatggagccagtcctgaccgctgtggtgaccttgtctgtccaggagccc
atttcaaacgtgactctaagagccaacgccactgatctagtggaattaaacgacactgct
attttcacctgctccgtctcctctggtacctccctctcctaccgctggatgaatggcagc
tcagaggttgcagccagtgaccgagttcagcttggtgttgggaacagcactctctccata
gtcagtgtgacacgatacgatgaagggccgttcagatgtgaggtcatcaatggaatcagc
aatggcaccagccagcccattggcctcaatgttagatatggcccaagtaaactcaccatg
atggtagttcctgagatgatcataggacatacagcctacatgatgggctctgtcatcact
ctgtcctgctccgctcagtccaaacccgctgtgtcctacaagtggaggtttaatggggtg
ttcctcaacgagcaaagtccacagctgagcctgcagaacaccagggagaaccagacagga
agttacgcctgcttagcccacaacaatgtcacactccgatacgccaccatgaccacaatg
ataaagattgtggagccgatttcagcggtgtcgttgaaccgtgatgggaagccaccgata
ctggatcagtcgttcactctgcggtgtgaggtgactggacctgtagactacattcactgg
ttgattaacggccaggtcatctccctaaacaacagaacattcttctctacggacaacaag
acaatggttatcaacccaatccagttttctgacagtggagaatatctctgtgaggccttt
aatgctgtcagtaacaagaccagcatgacatacacgcttgtggtgaactatggaccagag
aaacctgatgtaactagtccagatatagcaatgacaggacacatcgtgaccttcaactgc
tctgcctcctctcagcctcccagccagttcagctggttcttcaatggctcccaggtggag
actggctcagtgtatgagactgacccactgaccttagccagtcatggggagtacacctgt
gtgtccttcaacaacgtcactggcagaaacagcactgtctccaagatgctcattgtcatt
gaaccagtctccatggccatggtgaaagtcatgggtgcccaaccaatagcagacaacatg
ttttctctgacgtgtgagaccactggaaccatttactccattcactggatgaagaacggc
tggcctctgtatgctgataacagaacagacttctctatgaacaacaatacacttaccttc
aactctgtccaggattctgacaacggaggctatcagtgttctgcctacaaccccctcagc
aacatgaccagcacagaatacagactgatcgtcaactatggtccagagagacctgttatc
atgagtccggacatagcgatgacaggatacatcgtgaccttcaactgctctgcctcctct
cagcctcccagccagtttagctggttcttcaatggctcccaggtggagactggctcagtg
tatgagactgacccactgaccttagccagtcatggggagtacacctgtgtggctttcaac
aacatcactgacagaaacagcactgcctccaagatgctcaccatcattgcacctgtgacc
atgaccacggtgaaagtcattggagcccagccaatactgaacgagagattctctctgacc
tgtgagaccgctggaacggtttactccattcagtggatgaggaacggctggcctctgtat
gctgacaacagaacagacttctctatgaacaacaatacactgaccttcaactatgtccag
gattctgacatcggagactatcaatgttctgcttccaaccccctcagcaacatgaccagc
tcaaactacagactgatcgtcaactatggaccagagatgcctgttataacaggaccagca
ttaggagaaacaggacacaacgtgaccttcaactgctctgcctcctctcagcctcccagc
cagttcagctggttcttcaatggctcccaggtggtgactggctcagtgtatgagactgac
ccactgaccttagccagtcatggggagtacacctgtgtggccttcaacaacgtcactggc
agaaacagcactgtctccaagatgctcattgtcattgaaccagtctccatggccatggtg
aaagtcatgggtgcccaaccaatagcagacaacatgtttactctgacgtgtgagaccact
ggaaccatttactccattcactggatgaagaacggctggcctctgtatgctgataacaga
acagacttctctatgaacaacaatacacttaccttcaactctgtccaggattctgacaac
ggaggctatcagtgttctgcctacaaccccctcagcaacatgaccagcacagaatacaga
ctgatcgtcaactatggtccagagagacctgttatcatgagtccggacatagtgatgaca
ggatacatcgtgaccttcaactgctctgcctcctctcagcctccgagccagtttagctgg
ttcttcaatggctcccaggtggagactggctcagtgtatgagactggcccactgacctta
gccagtcatggggagtacacctgtgtggccttcaacaacgtcactggcagaaacagcact
gtctccaagatgctcattgtcattgaaccagtctccatggccatggtgaaagtcatgggt
gcccaaccaatagcagacaacatgttttctctgacgtgtgagaccactggaaccatttac
tccattcactggatgaagaacggctggcctctgtatgctgataacagaacagacttctct
atgaacaacaatacacttaccttcaactctgtccaggattctgacaacggaggctatcag
tgttctgcctacaaccccctcagcaacatgaccagcacagaatacagactgatcgtcaac
tatggtccagagagacctgttatcatgagtccggacatagcgatgacaggatacatcgtg
accttcaactgctctgcctcctctcagcctcccagccagtttagctggttcttcaatggc
tcccaggtggagactggctcagtgtatgagactgacccactgaccttagccagtcatggg
gagtacacctgtgtggctttcaacaacatcactgacagaaacagcactgcctccaagatg
ctcaccatcattgcacctgtgaccatgaccacggtgaaagtcattggagcccagccaata
ctgaacgagagattctctctgacctgtgagaccgctggaacggtttactccattcagtgg
atgaggaacggctggcctctgtatgctgacaacagaacagacttctctatgaacaacaat
acactgaccttcaactatgtccaggattctgacatcggagactatcaatgttctgcttcc
aaccccctcagcaacatgaccagctcaaactacagactgatcgtcaactatggaccagag
atgcctgttataacaggaccagcattaggagaaacaggacacaacgtgaccttcaactgc
tctgcctcctctcagcctcccagccagttcagctggttcttcaatggctcccaggtggtg
actggctcagtgtatgagactgacccactgaccttagccagtcatggggagtacacctgt
gtggccttcaacaacgtcactggcagaaacagcactgtctccaagatgctcattgtcatt
gaaccagtctccatggccatggtgaaagtcatgggtgcccaaccaatagcagacaacatg
tttactctgacgtgtgagaccactggaaccatttactccattcactggatgaagaacggc
tggcctctgtatgctgataacagaacagacttctctatgaacaacaatacacttaccttc
aactctgtccaggattctgacaacggaggctatcagtgttctgcctacaaccccctcagc
aacatgaccagcacagaatacagactgatcgtcaactatggtccagagagacctgttatc
atgagtccggacatagtgatgacaggatacatcgtgaccttcaactgctctgcctcctct
cagcctccgagccagtttagctggttcttcaatggctcccaggtggagactggctcagtg
tatgagactggcccactgaccttagccagtcatggggagtacacctgtgtggccttcaac
aacgtcactggcagaaacagcactgtctccaagatgctcattgtcattgaaccagtctcc
atggccatggtgaaagtcatgggtgcccaaccaatagcagacaacatgtttactctgacg
tgtgagaccactggaaccatttactccattcactggatgaagaacggctggcctctgtat
gctgataacagaacagacttctctatgaacaacaatacacttaccttcaactctgtccag
gattctgacaacggaggctatcagtgttctgcctacaaccccctcagcaacatgaccagc
acagaatacagactgatcgtcaactatggtccagagagacctgttatcatgagtccggac
atagtgatgacaggatacatcgtgaccttcaactgctctgcctcctctcagcctcccagc
cagttcagctggttcttcaatggctcccaggtggagactggctcagtgtatgagactgac
ccactgaccttagccagtcatggggagtacacctgtgtggctttcaacaacatcactgac
agaaacagcactgcctccaagatgctcaccatcattgcacctgtgaccatgaccacggtg
aaagtcattggagcccagccaatactgaacgagagattctctctgacctgtgagaccgct
ggaacggtttactccattcagtggatgaggaacggctggcctctgtatgctgacaacaga
acagacttctctatgaacaatacactgaccttcaactatgtccaggattctgacatcgga
gactatcaatgttctgcttccaaccccctcagcaacatgaccagctcaaactacagactg
attgtcaactatggaccagaggcgcctgttataacaggaccagcattaggagaaacagga
cacaacctgaccttcaactgctctgcctcctctcagcctcccagccagttcagctggttc
ttcaatggctcccaggtggtgactggctcagtgtatgagactggcccactgaccttagcc
agtcatggggagtacacctgtgtggccttcaacaacgtcactggcagaaacagaactgtc
tccaagattctcactgttgttgaaccagtcaccatgaccatggtgaaagtcatgggatcc
cagccaatactgaaccagacattctctctgacctgtgagaccactggaaccatttactcc
attcagtggatgaggaacggctggcctctgtatgctgacaacagaatagacttctctatt
gacaataatacactgaccttcaactctgtccagcattctgacaaaggagactatcagtgt
tctgcctacaaccccttcagcaacatgaccagcacagactacagactgatcgtcaactat
ggtccagagagacctgttatcatgagtccggacatagcgatgacaggatacatcgtgacc
ttcaactgctctgcctcctctcagcctcccagccagtttagctggttcttcaatggctcc
caggtggagactggctcagtgtatgagactgacccactgaccttagccagtcatggggag
tacacctgtgtggccttcaacaacctcactgtcagaaacagcactgtctccaagatgctc
accatcattgaggctataacgtcggtgacggtgaaacgaaacaaattaccaatagcatct
gacaacctaaccctgacctgtgttgtcaccgggcactatgacaccatctactggatgaag
gacaacctgtctctggtcctgaacaacaccttgaactctgacatcaccatctctaacaac
tctttgcacttcagtccagtcaaggtgtctaacgatggaaactatcagtgcgtcgccacc
aacctctttggtccaaacaccagccctaaataccagctactggtgaactatggccctaag
agtgtgaatatctctggcccagtctcagtggtgattggctcagtaaccacagttacactg
aagtgctctgccgactcaaggccaatcagcgagtacgggtggaaattcaacaatcaatca
gtgtttgggactggacctatgatcgctgttattgcctccttggagaatgcaggggactac
acttgtgtggccaagaaccctgtgaccaacatctcaacgtccaagaccattagtctggat
gttactggccactcgaatgcccctccattccaggccagagttggtctgatgctaacagcc
ctgctagctctctctctctgcctctga
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integrated database retrieval system
