Oncorhynchus mykiss (rainbow trout): 110509925
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Entry
110509925 CDS
T07259
Symbol
gigyf1b
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110509925 (gigyf1b)
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110509925 (gigyf1b)
Surveillance factors
Other surveillance factors
110509925 (gigyf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
110509925
NCBI-ProteinID:
XP_021446819
Ensembl:
ENSOMYG00000047371
UniProt:
A0A8C7V3B1
LinkDB
All DBs
Position
Y:28277874..28310342
Genome browser
AA seq
1054 aa
AA seq
DB search
MTAETLNFGPECCLGEDNGRCISNLNLRLRALSRGRSVTSPPPSPALPKSKLADYRYGRE
EMLALYIKDDKPPEDITQDKEFAAILQDEPVQPLALEPLTEEEQRNFSMSVNSVAVLRLM
GKGGGAAPAGVAKGRGGGIRGRGRGEGAFYQRAPGGPDDGEVGFGRGRDMLRSQSWDDRA
ERPKFEKPIRRAEVVRPGFEEAGPLGRKDSWRADSGNWRTLREEEEEAAAGGGGEEQPAW
RVAGTRRDDGGPRSAGWRDHGGRRKFEFDFRDSEGPRREDDRDGLPEWCTDEEDGEMGTF
DSSGAFMCIKKGSKGTITEEDLEFEALVEDENGQEVKDNGQEGKDNYKDNYIDGDECEGA
CEGVVKYRTPSPPAVSASPSSDPLPAPCAPEAPLTPISHPSKTNHVPTQGSSPPGSGAQL
SPDPSSSTTTFSSLMPPPSFGSLLPSTGGEVEEDEGMKHLQQEAEKMVASLQDTSLEEEC
FTQALQESHNITSQSLTHPAPHSHTHTAGHTHSHSAHRDCALPLSHEAAMKWFYKDPQAE
IQGPFSTVEMCEWFQAGYFSMTLLVKRGCDEGFQPLGDVIKMWGRVPFSPGPSPPPLLVR
QPPPPRGSSGNMDQELLKKQLEQAATAALYQQLQIRFQHMNRSGESSVMNRSMSVPDNGS
MWDMRTSASQQSGGEANLWDLTMSHSTQGPSLEQLQKLQDRREAELRAKREEEERKRREE
KRRQQEEQKRREEEELYRRKQQCRQQQELILKLLQQAQPGGPGSISGSGTVWSGPQVSAL
SKQGKSLSLLELETERLLKQQAQHQRAQQQRDRHGGLSMGQWGEGSVGMWSGGGMEPKGS
SGGMGVWEEAVKNQNSLRNMGMKNSRSSPSLSEQYMLRKKRTEEEDKLLKLLQGMKPQDG
FTTWCEQMLHALNTSANNSPSSSLDVATIVAYLKEVESPYEVLDFIRSYLGDTVEAKEFA
KQFLERRAKQKANHQRQQQQLSKEVPGLSVNNFPLQSMFQAAQMGKGGMYDSQAAKMKKK
QTMMLHSDPSILGYSFLGAGDRMSLGEMETVEDY
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgaaacacttaacttcggcccagaatgttgtctaggggaagataatgggcga
tgcatatccaacttaaacttgaggctccgtgcactatccagagggcggagtgtgacgtcc
ccccctccctctccagcattgccaaagtccaagctggccgattaccgctatggtcgtgag
gagatgctagcactttatatcaaagatgacaaacccccagaggatatcacgcaggataag
gagtttgctgctatcctgcaggatgagcctgtgcagcctttggcactggagcctctaact
gaggaggagcagagaaacttctccatgtctgtgaacagtgtggctgtgctgaggttgatg
ggaaagggaggcggggccgcccctgcaggtgtggccaagggtcgtggaggaggcatcaga
gggagaggaagaggtgaaggtgcattctaccaaagagctcctggaggtcctgatgatgga
gaggtgggcttcggtcgtggccgagatatgctccgcagccaaagctgggatgaccgagct
gagaggcccaagtttgagaagccaatcaggcgtgctgaggtagtgcgtccagggtttgag
gaggcgggacctcttggcaggaaggactcctggcgtgccgacagtggtaactggcgtacc
cttcgggaggaggaggaagaggcagcagcaggaggaggaggggaagagcagccagcctgg
agagttgcaggaacccgccgtgatgatgggggtcctcggtctgcaggctggcgtgatcat
ggcggccggaggaagtttgagtttgacttccgtgacagcgagggaccccgcagggaggac
gacagggacggccttcctgagtggtgcactgatgaagaggatggagagatgggcaccttt
gactcctcgggggccttcatgtgcatcaagaaaggctccaagggcaccatcactgaagag
gatctggagtttgaagctctagtggaagatgagaacggtcaggaagtcaaggacaacggt
caggaaggcaaggacaactataaggataactacattgacggagatgagtgtgaaggagca
tgtgagggggtggtcaagtacaggactccatctcctcctgctgtctcggcctctccctcc
tcagaccctctccctgccccctgtgccccagaggctcccttgacacccatatcccacccc
tccaaaaccaaccacgtgcccactcaaggcagctcacctccagggagtggtgctcagctc
agtccagacccttcctcctctaccaccactttctccagcctgatgcctcctccctccttt
ggatctctcctcccatcaacagggggagaagtggaggaggacgagggcatgaagcacctg
caacaggaggctgaaaagatggtggcatctctgcaggacacatcccttgaggaggagtgt
ttcactcaagcactgcaggagagccacaacattacctcccaatctctcacacacccagcc
ccacactcacacacacacaccgctggacacacacactcccactctgcccatagggactgt
gccctgcccctctcccacgaggcagccatgaagtggttctacaaggacccccaggcagag
atccaaggtcccttctccactgtggagatgtgtgagtggttccaggcaggctacttctcc
atgacactgctggtaaagaggggttgtgatgagggcttccagcccctgggtgatgtcatc
aagatgtgggggcgtgtgcccttctcccccggcccctcccccccacccctgctggtgaga
cagcctccaccacctcgggggtcctctggcaatatggatcaggagctgctgaagaaacag
ttagaacaagcagccactgcagctctataccagcaattgcagataaggtttcagcacatg
aacaggagtggggaatctagcgtgatgaacaggtccatgtcagtaccagataatgggtct
atgtgggacatgcgtacctcagcctcccagcagtcaggaggtgaggccaacctatgggac
ttaaccatgagtcattccactcaggggccatctctggagcagctacagaagctccaggac
cggcgtgaggctgaactccgggccaagcgagaggaggaggagaggaagcggagggaggag
aagaggaggcagcaggaggagcagaagaggcgtgaggaggaggagctatacaggcgtaag
cagcagtgtcggcagcagcaggagctgatcctgaagctgctgcaacaagcccagcctggg
ggcccagggagtatctctgggtcagggactgtgtggagtggcccccaggtctcagcgctc
tccaagcaaggcaagagcctcagcctgctggagctggagactgagaggctgctcaaacag
caggcccagcaccagagggcccagcagcagagggacaggcatggaggcctgtctatgggt
cagtggggtgaggggtctgtgggcatgtggtctggtgggggcatggagcccaaaggcagc
tctggaggtatgggtgtctgggaggaggctgtgaagaaccagaacagcctccgcaacatg
ggcatgaagaacagccgcagcagcccctctcttagcgagcagtacatgttaaggaagaag
cgtacagaggaggaggacaaattgctgaagctgctgcagggcatgaaaccccaggacggc
ttcaccacctggtgtgaacagatgctgcacgcgctcaacacctcggctaacaactccccc
tcctcgtccctggatgtagccaccatcgtggcctatctgaaggaggtggagtctccctac
gaagtccttgactttatccgctcctacctgggcgacactgtggaagccaaagagtttgcc
aagcagttcctggagcggcgtgccaaacagaaagccaaccaccagaggcagcaacagcag
ttatcaaaagaagttccaggactgtccgtgaacaactttcctctacagtctatgttccag
gcagcccagatggggaagggaggaatgtatgacagccaagctgcaaagatgaagaagaaa
cagaccatgatgcttcactccgaccccagcatcttaggatattcattcctgggcgcaggg
gacaggatgagcttgggcgagatggaaacagtggaagattattga
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