KEGG   Oncorhynchus mykiss (rainbow trout): 110509930
Entry
110509930         CDS       T07259                                 
Name
(RefSeq) period circadian protein homolog 1 isoform X1
  KO
K21944  period circadian protein 1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:omy03400]
    110509930
DNA repair and recombination proteins [BR:omy03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    110509930
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 110509930
NCBI-ProteinID: XP_021446825
Ensembl: ENSOMYG00000047395
UniProt: A0A8C7UZY3
LinkDB
Position
Y:complement(28544156..28553877)
AA seq 1494 aa
MSDENAYTTSVNDTSGVGVEENVVGLKAGCQSPESGLSQTGSSGRSNGKRTRSGGKSSPK
SSNSDDTDAHSSGNDSAEREVEGHMGRETSTCSSSHNGKDSAMETTESKRANSHSSSPPN
SSMVYSLLSGSSEQDHPSTSGCSSDQPARLQTQRELLKALKELKIRMPADHWAKGRSSTL
ASLQYALNCVKQVRANQEYYHQWSVEESHGCSLDLSAFTTEELDNITSEYTLQNTDTFSV
GVSFLSGKLVYISPQASPMLRTKPNRLQGTLFSELLAPQDVSTFYSSTAPCRLPPWASCT
GSMTSPVDCTQEKSMFCRISSGRDSEGEVRYYPFRMTPYQLTLRDSDMSQPQPCCLLIAE
KVHSGYEAPRIPADKRIFNTSHTPGCLFQEVDERAVPLLGYLPQDLVGTPVLMYLHPDDR
PVMVAIHKKILQSAGQPFEHSPLRMCARNGEYLTIDTSWSSFVNPWSRKVAFIVGRHKVR
TSPLNEDVFTPSMEVEVRAMSPEIPRLSEQIHRVLVQPVHSGASQGYCSSHGSQPHRPSP
GSSGSSSPSIKGIIQMTIQRPQQMTFQQMCKDVHMVKTNGQQVFIESRNRPPLRKHASAG
DLVTPENLNKDLGPIGALGPTKTLASVQSRKDPSANYSYQQINCLDSIVRYLESCNVPNT
VKRKCGSSSCTTSSTSDDDKQRELSGTAKDLEGSQGKEGSKGGPQMSPLALHCKAESVVS
LTSQCSFSSTIVHVGDKKPPESDIIMMMEETPPTTTAPAINNAITTAVTPCPSTFPSPAT
PSPAQPERESHRSAGCSGSLGLTKEVLSAHTQQEEQVFLSRFRDLGQLRMLDPGPPLRGH
TTTPKGVHTSKDYPAGGNGRRRGRGAKKPKHQQEGSQHGGRPKTGSGMNRSSRREGQGHQ
GPMFPMGQPLMRQGPLTSSSSWPTSVASLPPAVSQYPPGVLPFFPLYPNVQQQQLLAHTG
VNPNAMQMGYPSPQPGFQYPLHANQISMPMAPPMMVVLPNYMFPQLNGGVPQLNQLNTAM
PQYNTAMPHLNPSIPGMAQLNQALPQFNQAIPLPQLNPVLAQFNPSVTQMNGMPLAQHNP
SQVNPALQVNPALSMIPQHFHNPNPTLPFPNPIPVPGLPCFALPRIDPTFVPRGNSRSST
PQSTCQSPLEGTNSPLFQSRCSSPLNLLQLEELPGNRQEGMSTGAQQTPPPPGSSSQVGG
QSSVNRNSNMKGDAKEYDNADVDNQDVMSTSSDLLDLLLQEDACSGTGSAASGFGSSGSG
SSGSGSSGSNGCSTSGSDTRSSNTSKYFGSVDSSENDHKQAAGGAEEAQLMKYVLQNPVW
LLMANTDDKVMMTYQMPTRDRETVLRQDRMVLRVVQKQQPHFTEEQKRELIQVHPWMGTG
RLPQAINNPTCTGCGSPPATSAPRTFDVELQDMDLTGVLQLQEEATAHTETHVTMATDTS
ISPPQAPQTETKGGEAERQGEQEGNCKDTRVKELEVTSSSSVTEKGDSVAVNGN
NT seq 4485 nt   +upstreamnt  +downstreamnt
atgagtgatgagaatgcatataccacttctgtaaatgacactagtggagtaggtgtagaa
gaaaatgtggtgggactgaaggcgggctgccagtcccctgagtctggactgagtcagact
ggcagctctggtcgctccaatggaaagagaactcggtctgggggcaagtcctcccccaag
tcctcaaactccgatgacaccgatgcccactcgagtgggaacgactcagccgaaagagag
gtggaaggtcacatgggacgtgagacatcaacctgcagcagctcccataacgggaaggac
tctgccatggagacaacagagagcaaaagagccaactcccacagctcttcccctcccaac
agctctatggtctacagcctgctgagtggcagctcggagcaggaccacccgtccaccagc
ggatgcagcagtgaccagccagcccggctgcagacccagagagagctgctcaaggctctg
aaggagctaaagatccgcatgcctgcagaccactgggcgaaaggccgctccagcaccctg
gcctccctgcagtatgctctcaactgtgtcaaacaagtccgagcgaatcaggagtattat
caccagtggagtgtggaagagagccacggttgcagtctggacctctctgccttcaccaca
gaggaactggacaacattacttctgaatacacactccagaacacggacacgttctcagtg
ggagtgtccttcctctctgggaagttggtgtacatctccccccaggcctctcccatgctg
cgcactaagcctaatcgactccaggggacactcttctctgagctgttggccccccaggac
gtcagcactttctacagcagcactgctccctgccgcctgcccccctgggcctcctgtact
ggttccatgacctcccctgtggactgcacccaggagaaatccatgttctgccgtatcagt
agtgggagggacagtgagggggaagtgcggtactaccccttccgtatgaccccttaccag
ctaaccctacgggactccgacatgtcccagccacagccctgctgcctgctcatcgctgag
aaggtgcactcaggatacgaagctccccgcatcccagcggacaagaggatttttaacact
agccacacccccggctgtctctttcaggaagtggatgaaagagctgtgccgttgctaggc
tacctgccccaggacctggttgggactcctgtcctcatgtacctccaccctgatgacagg
cctgtcatggtggccatacacaagaagattctccagtcagcggggcagccctttgaacac
tcgcccctgcgtatgtgtgcccggaacggggagtatctcaccatagataccagctggtcc
tccttcgtcaacccctggagccgcaaagtggccttcatcgtgggtcgacacaaagtccga
acgagtcccctgaacgaagatgtgtttactcctagtatggaggtggaggtgcgggccatg
tctccagagatccccaggctcagtgagcaaatccaccgtgtgctggtgcagcctgtccac
agtggtgcctcccagggctactgcagctcccatggatcccagccacacaggcccagcccg
ggctcctcaggcagcagcagcccctccatcaaggggatcatccagatgactatccagaga
ccacagcagatgacattccagcagatgtgtaaggacgtccacatggtgaagaccaatggt
cagcaggtcttcatcgagtcccgcaaccgcccaccgctccgcaaacacgccagcgctgga
gacctcgtgacgccagagaatttaaacaaagacttgggacctattggcgctctggggcca
actaaaaccctggcctccgtgcagtcaaggaaagatccgtcagccaactactcctaccag
cagatcaactgtctggacagcatcgtacgctacctggagagctgtaacgtccccaacaca
gtgaagaggaaatgtggctcctcctcctgcaccacatcatcaacgtcagacgatgacaag
cagagggagttgtctggaacagctaaagatctcgaagggtcacagggtaaggaagggtct
aaaggagggccacagatgagtcctctggcgctgcactgcaaggctgagagtgtggtctct
ctcacgtcccaatgcagcttcagcagcaccatcgtccatgtaggggacaagaagccccca
gagtcagatattatcatgatgatggaggagacaccacccaccaccaccgccccagccatt
aacaacgccatcaccacggcagtgaccccctgtccctcaacctttcccagcccagcaaca
cccagccctgcccagcctgagagagagagccacaggtcggctggatgctcaggcagcctg
ggtctgaccaaggaggtgctgtctgcccacacccagcaggaggaacaggtgttcctgagc
cggttcagggacctgggacagctccgcatgctggaccccggtcctcctctgagaggacac
accaccacacccaaaggagtgcacacctcgaaggactacccagcaggtggtaacggacgg
aggaggggccggggggccaagaagccgaagcaccagcaggagggctcccagcatgggggc
cgccccaagacaggctcagggatgaacagaagttccagaagggaagggcaggggcaccaa
ggccccatgttccccatgggtcaacccctaatgagacagggacccctgacctcgtcctct
tcctggcccacctctgtggccagcctccctcctgccgtgtcccagtaccctccaggagtc
ctgcccttcttccccctctaccccaacgtgcaacaacaacaactcctggcccacaccggg
gtgaaccctaatgccatgcagatgggttaccccagcccccagccaggcttccagtacccc
ctgcatgccaatcagatttccatgccaatggctcccccgatgatggttgttctgcccaac
tacatgttccctcaactcaatggaggtgtaccacagctcaaccagctcaatacagccatg
cctcagtataacacagccatgcctcaccttaaccccagtatccctggtatggcacaactt
aaccaggcactaccgcagttcaaccaggctatcccactaccacaactcaatcctgtctta
gctcaattcaacccttctgtgacgcagatgaatggcatgcctctagctcaacacaacccg
tcacaggtcaatcctgcattacaggtcaatcctgctttgtcgatgatcccacaacatttt
cacaatcccaacccaacattacctttcccaaatcccattccggtgcccgggcttccttgc
tttgccttacccaggattgatcccacttttgtcccacgtggcaactcccgctccagcacc
cctcagtccacatgccaatcccccctggaggggaccaactcacccctcttccagtcacga
tgctcctcccccctcaacttgctgcagctggaggagttgccaggcaacaggcaggagggc
atgtcaacaggggcgcagcagaccccacccccacctggctcgtcgtctcaggtcggaggt
caaagctctgttaaccgcaacagcaacatgaagggtgatgccaaagagtacgataatgct
gatgttgataaccaggacgtcatgtccacctccagtgacctgctggacctgctgctgcaa
gaggacgcctgctcaggcaccggctcggctgcctctggcttcgggtcctctggctccggg
tcctctggctccgggtcctctggctctaatggatgcagcacctcagggagtgacacgaga
agcagcaacaccagcaagtactttggcagcgttgactcatcggagaacgaccataagcag
gcagcaggcggggctgaagaggcccagctcatgaagtatgtccttcagaaccctgtttgg
ctcctcatggccaacacagatgacaaggttatgatgacgtaccaaatgcccaccagggac
agggagactgttctaaggcaagatcgtatggtactgagggtggtgcagaaacagcagccg
cacttcactgaggagcagaagagagagctgatccaggtccacccctggatgggcaccgga
cgcctgccacaggccatcaacaaccctacttgtaccgggtgcggttctcctccagctacc
tccgccccccggacctttgatgtggagctacaggacatggatctgactggggtcctccag
ctacaggaagaggctaccgcacacacagagacacatgttaccatggcaacagacacttcc
atctctccaccacaagccccccagacagagactaaggggggtgaggctgagaggcaaggg
gagcaggaaggaaactgtaaggacaccagagtgaaggagttggaggtaacatcctcatca
tctgtaacagagaaaggggactctgtggctgtaaacggcaactga

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