Oncorhynchus mykiss (rainbow trout): 110509940
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Entry
110509940 CDS
T07259
Symbol
tlr21
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
omy04054
]
110509940 (tlr21)
Pattern recognition receptors [BR:
omy04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
110509940 (tlr21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
TIR
LRR_14
TIR_2
LRR_9
DHU1_N
COG3_N
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
110509940
NCBI-ProteinID:
XP_021446844
Ensembl:
ENSOMYG00000000991
LinkDB
All DBs
Position
3:complement(12864942..12875688)
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AA seq
975 aa
AA seq
DB search
MAGLKYKILVSVAIVLHIAKFTVGYSFRNCTEDPNSNHTTFLCIRHQAKNISAIIGDLPP
YATTIIISINLIKHIPDNSFVHLPNLRTLQIDNNHLETIDNQAFQNMSQLKSLNLSLNKI
SNLSSSVFQDLKNLVNLSLNNNSVIRLPPGIFSSLSNLDVLTLRQNYLNNFSAVAESVTH
LSKLTKLDLCNNYLTSLHHSNHTDLPESLTTLYLCKNKLVTLACEWGFLSHVLLLDLSYN
DQLPSRAFQGLDLRKLNYMRLHSTNVTVPELLNVSNVRGGNIDFSGMGLKTDNLLMELCS
LLSTKVKFVKKLSLGSNGILSLRKNTLSNCPPIRGLLDLSFNQLKKVRCLHFLKGQDQIK
KFTAEKNHLTSLMSCNRQNLSFPNLTDLSYRYNRILKVNSFAFHHTPNVKTLQLNINIIA
YLDHKAFSGLTNLVTLRLDNNLLTDLYQDSFEDLHSLEILNLRNNQIAVLFNKTFHSLKH
LHILDLGGNKITHFEESAFVGLDNLANFYLDGNNLKQIDSSKFKPFHATLEVLDLHGNQV
SFSSKHTNSPFVNLTKLRNLKLDAQMPHGLNMLPYAFFRGLNSLQSLYLTDNHIFSFAAD
TFDDLTNLTFLSLDNSCAGVMQLQPGVFKNLRKLSKLSARNMGIQSFSKEVFGNLTELQI
LLLNQNVMQSLDVNVLEALPKLRYLDLRNIPLSCTCLNSDLQNWTLTNQRVQLVLLYSLQ
CQDKKLQKSFYNFDTNVCYLDLGEYLFATTTTVILLLTIIPLLYTKLYWKLKYSYYVFRS
WFGQHWRRLREKEEHSKYDAFISYNSADEPWVLDQLLPNLEGNGASFRLCLHHRDFELGR
NIVDNIVSAVYSSRKTICVVSRHFLCSEWCSLEIQLASYRLFHELRDVLLLIFLEPIPER
QLSAYHRMRKVMLKKTYLQWPGSDCTDPVKAQELFWNHLRRALRSGSSRFEEEDEGREEY
FNQPPTDDDNYYLMP
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggccgggttaaaatataaaatattagtatcagtagcaattgtccttcacattgccaag
ttcaccgttggctatagcttcaggaattgcactgaggacccaaactcaaaccacacaaca
ttcctttgtatacgtcaccaggcaaagaacatatctgccattataggtgacctgccaccc
tatgccaccacaattataatctccataaacctgataaaacacatacctgacaatagcttt
gttcaccttcctaacctcaggacacttcagattgacaataaccatctggagaccatagac
aaccaggcattccaaaatatgagccaactgaagagcctaaacctgtccttgaacaaaata
tcaaatctcagctcctctgtgtttcaagacctcaaaaaccttgtcaacctgtcactaaat
aataactcagtgattaggctccctccaggtattttctcctcactctccaatctggatgtc
ctcacattacggcagaactacctgaacaacttctctgcggtggcagaatctgtgactcac
ttatcgaagctgacgaaactagacctgtgcaataactatctaacgtccctccatcattct
aaccatacagacctaccagagtccctcaccaccctctatctctgtaaaaacaaactggtc
actttagcatgtgagtggggattcctcagccatgtactactgctggatctctcctacaat
gaccagctcccttcaagggctttccaaggtctggacttgcggaagctaaactacatgcgt
ttgcattcaaccaatgttacagtgccagaacttttgaatgtcagcaatgttagaggtgga
aacatagacttctctggtatggggttgaagactgacaatctgctcatggagttatgcagc
cttttgagtacaaaggtcaaatttgttaaaaagctgagtctgggaagcaatgggattctg
tcattgcgaaagaacacactttcaaactgtccaccaatccgaggtttattggacctttcc
tttaaccagttgaagaaggtaagatgcctccactttctcaaaggacaggatcaaatcaag
aaattcacagcagagaaaaaccacctcacctccctaatgtcctgcaacagacagaacctc
tctttcccaaatctgacagatctgagctaccgttacaatcgcatactcaaagtcaactct
tttgctttccaccacacaccaaatgtgaagaccctacaactcaacataaacataatcgcc
tatcttgaccataaggctttcagtgggctgactaatcttgtcacactgcgtctggacaat
aacctcctgaccgatctgtaccaggatagctttgaagatctgcatagcctggaaatactt
aacctacgtaacaatcagatagctgttcttttcaacaagactttccattcactcaaacac
ctgcacattttggatcttggagggaacaaaatcactcattttgaagagtcagcctttgtg
gggctcgataacctggccaatttttaccttgatggaaacaatctcaaacagattgacagc
tccaagtttaaaccattccatgctactcttgaagttcttgatctacatgggaatcaggtt
agcttctcttctaaacataccaactctccttttgtgaatctaacaaaacttcgcaacctc
aaactagatgcgcagatgccccacggcctcaacatgctgccttatgcctttttccgtggt
ctcaactccctccaatcgctctaccttaccgacaatcacatcttcagcttcgcagcagac
acttttgacgatctgaccaacttgactttcctctccttggacaactcctgtgccggggtg
atgcagctgcagccgggtgtcttcaaaaacctgcggaaattgagcaagctcagtgcaagg
aacatgggcatccagtccttctcaaaggaggtttttgggaatctgacagagctgcaaatc
ttgcttctcaaccaaaacgtaatgcaatccttagatgtgaatgtgctggaggctctacct
aaattgcgctacctggacctgcgcaacattcctcttagttgcacctgcctcaacagtgac
ctgcagaactggactttgactaaccagagagtccagttagtcctactatacagtctacag
tgccaagataaaaaactccaaaaaagcttctacaacttcgacaccaatgtttgctacctg
gacctgggagagtacctttttgccaccacaaccactgtgattttactgctgactataatc
ccacttctctacaccaagctgtattggaaactgaagtatagctattatgtgttccgctcc
tggttcggccaacactggcgcaggctgagggagaaagaggagcacagcaaatacgatgct
ttcatctcctataactcggcggacgagccctgggtacttgaccagctacttccaaacctg
gagggcaacggagcctctttcaggctgtgcctgcaccaccgtgactttgagctgggtcgc
aacatcgtggacaacatcgtctccgccgtgtacagcagccgcaagaccatctgcgtggtt
agtaggcacttcctgtgcagcgagtggtgttccctggagatccagctggccagctacagg
ctcttccatgagctccgggatgtgctcctgctcatcttcctggaacccatccctgaaagg
cagctctcagcttaccaccgtatgagaaaggtcatgttgaagaagacctacctgcagtgg
ccggggtcagactgcacagacccggtcaaggctcaggaactgttttggaaccatctgagg
agggcgctgaggagtgggagcagcaggtttgaagaggaggatgaggggagggaggaatac
ttcaatcagccaccgacggatgatgataactattacttaatgccttaa
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integrated database retrieval system