KEGG   Oncorhynchus mykiss (rainbow trout): 110509969
Entry
110509969         CDS       T07259                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110509969
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:omy03041]
    110509969
   04121 Ubiquitin system [BR:omy04121]
    110509969
Spliceosome [BR:omy03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    110509969
Ubiquitin system [BR:omy04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110509969
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 110509969
NCBI-ProteinID: XP_021446893
Ensembl: ENSOMYG00000043439
UniProt: A0A8C7U7F4
LinkDB
Position
Y:29638568..29645471
AA seq 779 aa
MGSSKKHKEKGRDKDKDAEERGHREHKKHRHKDRERDKERDGNREREKRKRSRSKERSVR
GSERDGRSKGERSTGEPRVKKEKVEPGCEGTEIAPQSASGDASLTIEETNKLRAKLGLKP
LEMTDTTKELGTKEQPIVAETINPVYIKQQKEMREKLAALKEKRLLNKKLGKVKTLAEED
WLDDTVAWVERSRKMSKEKELAEKRAKLLQEMDEEFGVSNLVEEEFGQTKKVAYSSRDLK
GLTVQHKMESFNEGETVILTLQDKGVLDEEGGDVLVNVGLVDKENAEKNVELKKKKPDYK
AYEEDESVDDMVTFKPRTVLGKYDEEIDGEKKKSFRLSKGGCAEGERERELQAIRETLRN
QAQSLEMPVLAIASEYYTPQEMVGFKKTKQRVRKIRKKEKALPDELQLDDTRNTDFGSRA
RGRGRKQLDEEGQEGVKERVIIPGLDVPQQSDDIRMADMDISDDENFTPPDPAVLEEDEA
EQELQKQLEKQRKLKQKQLLKNSGEKVAEQVRGLARGDDSDDEDKNNLNIVFNATSEFCR
TLGDIPTYGLSGNREDQEDIMDFEQEAERDGAGGSDSDGDENVGWSIVNVDEEQKQPDFA
TASTTILDEEPIVNSGLAAALALCKNKGLLDTQMQKISRVRAPTGALPNDNYSIEDKMTI
DDKYSRREEYRGFTQDFKEKDAYKPDVKIEYVDESGRKLTPKEAFRQLSHRFHGKGSGKM
KTERRMKKLEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNANNITK
NT seq 2340 nt   +upstreamnt  +downstreamnt
atgggttcgtcgaaaaaacacaaggaaaagggccgtgataaagataaggatgccgaagaa
cgtggtcaccgcgaacacaaaaaacaccgtcataaggaccgggagagggacaaggaacga
gatggcaaccgagagcgggagaaaaggaaacggtccagatcgaaggaaaggagtgtacgt
ggttccgagagagacggtcgcagtaaaggggagaggagtactggggagcctcgggtaaag
aaagaaaaagtggagcccggatgtgagggcacagaaattgcaccacagtctgcaagtgga
gatgcctcgcttaccattgaagagacaaacaagctgagggccaagcttggtctgaagcct
ctggaaatgactgacaccactaaagagctcggcacgaaggagcagccaattgttgcagag
acgatcaacccagtgtacattaaacagcagaaagagatgagggagaaactggcagctctg
aaggaaaagaggctcctcaataagaaactggggaaagtgaagaccttagcagaagaagac
tggctggatgacactgttgcctgggttgagaggagccggaagatgtccaaagagaaagaa
ctggcagagaagagagccaagcttctgcaggagatggatgaggagtttggtgtgagcaat
ctggtggaggaggagtttggacagaccaagaaggtcgcttacagctcccgggacctaaag
ggtctcactgtccagcacaagatggagtcatttaatgaaggggagactgtcattctcaca
ctgcaagacaaaggtgtgcttgatgaagaggggggcgatgttcttgtaaatgtgggtctg
gtggataaagaaaatgctgagaagaatgtggagttgaagaagaaaaagcctgattacaaa
gcctatgaagaggacgagagtgtggatgacatggttacgttcaagccgcgtactgtgctg
ggcaagtatgatgaggagattgatggagagaagaagaagagtttccggctgagcaaaggg
ggctgtgctgagggggaacgggaacgggagctccaggccatcagggagaccctgaggaac
caggcccagtccctggagatgcctgttctcgctattgcctcagagtactacacaccccag
gagatggtgggctttaagaagaccaagcagcgcgtcaggaagatcaggaagaaggagaag
gcattgcctgatgagctccaattagacgacacacgcaacaccgactttggctccagggct
cggggtcggggtcgcaagcaattggatgaggagggccaggaaggggtgaaggagcgtgtc
atcataccgggactagatgtaccccaacagtcagatgacatcaggatggcggacatggac
atcagtgacgatgagaacttcaccccccctgatccggctgtgctggaggaggacgaggca
gagcaggagctgcaaaagcagctggagaaacaacgaaaactcaaacagaaacagctgctc
aaaaactctggggaaaaggtggcagagcaggtccgagggcttgcaagaggggacgacagt
gacgatgaagacaagaacaacctgaacattgtgttcaatgccacctctgagttctgcaga
actctgggtgacatccccacctacggcctgtcgggaaaccgagaggaccaggaggacatc
atggatttcgagcaggaggcggagagagatggcgctggcggttcagactccgacggggat
gagaatgttggctggagcatcgtcaacgtggatgaggagcagaagcagcctgattttgcc
acagcctcgaccaccatcctggatgaagaacccattgtcaactctgggctggctgctgcc
ttggcgctctgtaagaataagggtctcttggacactcaaatgcagaagatatcccgtgtc
cgtgcgcctaccggtgccctgcccaatgataactacagcattgaggacaagatgacgata
gatgacaagtacagtcggagggaggaatatagaggcttcacccaggacttcaaggagaag
gacgcctacaagccagatgtcaagattgagtatgtggatgaatctggacggaagctcact
cccaaagaggctttccggcagctctcacatcggttccatgggaaggggtctggcaagatg
aagactgagaggaggatgaaaaagctggaagaggaagcgctgctgaagaagatgagcagt
agtgatacccctctgggaactgtcgctttgcttcaggagaaacagaagtcacagaaaacc
ccctacattgtgctgagtgggagtgggaagagcatgaatgcaaacaacatcaccaaataa

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